5eb7 FreshPorts -- biology/biococoa
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Port details
biococoa 1.6.0_2 biology on this many watch lists=0 search for ports that depend on this port
Bioinformatics framework

There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org search for ports maintained by this maintainer
Port Added: 30 Dec 2006 09:21:22
Also Listed In: gnustep
License: LGPL21


The BioCocoa framework provides developers with the opportunity to add
support for reading and writing BEAST, Clustal, EMBL, Fasta, GCG-MSF, GDE,
Hennig86, NCBI, NEXUS, NONA, PDB, Phylip, PIR, Plain/Raw, Swiss-Prot and
TNT files by writing only three lines of code.
The framework is written in Cocoa (Objective-C).

LICENSE: LGPL2 or later

WWW: http://bioinformatics.org/biococoa/
SVNWeb : Main Web Site : Distfiles Availability : PortsMon

NOTE: FreshPorts displays only required dependencies information. Optional dependencies are not covered.

Required To Build:
  1. devel/gnustep-make
  2. x11-toolkits/gnustep-back
  3. devel/gmake
Required To Run:
  1. devel/gnustep-make
  2. x11-toolkits/gnustep-back

This port is required by:

for Build for Run

To install the port: cd /usr/ports/biology/biococoa/ && make install clean
To add the package: pkg_add -r biococoa


Configuration Options
     No options to configure

Master Sites:
  1. ftp://ftp.FreeBSD.org/pub/FreeBSD/ports/distfiles/
  2. ftp://ftp.acc.umu.se/debian/pool/main/b/biococoa.app/
  3. ftp://ftp.au.debian.org/debian/pool/main/b/biococoa.app/
  4. ftp://ftp.bg.debian.org/debian/pool/main/b/biococoa.app/
  5. ftp://ftp.br.debian.org/debian/pool/main/b/biococoa.app/
  6. ftp://ftp.cl.debian.org/debian/pool/main/b/biococoa.app/
  7. ftp://ftp.cz.debian.org/debian/pool/main/b/biococoa.app/
  8. ftp://ftp.de.debian.org/debian/pool/main/b/biococoa.app/
  9. ftp://ftp.df.lth.se/pub/debian/pool/main/b/biococoa.app/
  10. ftp://ftp.ee.debian.org/debian/pool/main/b/biococoa.app/
  11. ftp://ftp.es.debian.org/debian/pool/main/b/biococoa.app/
  12. ftp://ftp.fi.debian.org/debian/pool/main/b/biococoa.app/
  13. ftp://ftp.fr.debian.org/debian/pool/main/b/biococoa.app/
  14. ftp://ftp.hk.debian.org/debian/pool/main/b/biococoa.app/
  15. ftp://ftp.hr.debian.org/debian/pool/main/b/biococoa.app/
  16. ftp://ftp.hu.debian.org/debian/pool/main/b/biococoa.app/
  17. ftp://ftp.ie.debian.org/debian/pool/main/b/biococoa.app/
  18. ftp://ftp.is.debian.org/debian/pool/main/b/biococoa.app/
  19. ftp://ftp.it.debian.org/debian/pool/main/b/biococoa.app/
  20. ftp://ftp.jp.debian.org/debian/pool/main/b/biococoa.app/
  21. ftp://ftp.nl.debian.org/debian/pool/main/b/biococoa.app/
  22. ftp://ftp.no.debian.org/debian/pool/main/b/biococoa.app/
  23. ftp://ftp.pl.debian.org/debian/pool/main/b/biococoa.app/
  24. ftp://ftp.ru.debian.org/debian/pool/main/b/biococoa.app/
  25. ftp://ftp.se.debian.org/debian/pool/main/b/biococoa.app/
  26. ftp://ftp.si.debian.org/debian/pool/main/b/biococoa.app/
  27. ftp://ftp.sk.debian.org/debian/pool/main/b/biococoa.app/
  28. ftp://ftp.snt.utwente.nl/pub/linux/debian/pool/main/b/biococoa.app/
  29. ftp://ftp.uk.debian.org/debian/pool/main/b/biococoa.app/
  30. ftp://ftp.us.debian.org/debian/pool/main/b/biococoa.app/
  31. ftp://ftp.wa.au.debian.org/debian/pool/main/b/biococoa.app/
  32. ftp://ftp2.de.debian.org/debian/pool/main/b/biococoa.app/
  33. ftp://mirror.symnds.com/debian/pool/main/b/biococoa.app/
  34. http://ring.nict.go.jp/archives/linux/debian/debian/pool/main/b/biococoa.app/
  35. http://www.gtlib.gatech.edu/pub/debian/pool/main/b/biococoa.app/

Number of commits found: 11

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
13 Oct 2012 13:39:59
Original commit files touched by this commit  1.6.0_2
dinoex search for other commits by this committer
- cleanup comments
Feature safe: yes
26 Jun 2012 05:43:33
Original commit files touched by this commit  1.6.0_2
dinoex search for other commits by this committer
- reset MAINTAINER
19 Mar 2011 12:38:54
Original commit files touched by this commit  1.6.0_2
miwi search for other commits by this committer
- Get Rid MD5 support
05 Jun 2010 06:14:28
Original commit files touched by this commit  1.6.0_2
dinoex search for other commits by this committer
LICENSE LGPL21
30 May 2010 12:28:39
Original commit files touched by this commit  1.6.0_2
dinoex search for other commits by this committer
- drop USE_GNUSTEP_PREFIX
16 Jan 2009 16:01:05
Original commit files touched by this commit  1.6.0_2
dinoex search for other commits by this committer
- add LICENSE:
06 Jun 2008 13:08:29
Original commit files touched by this commit  1.6.0_2
edwin search for other commits by this committer
Bump portrevision due to upgrade of devel/gettext.

The affected ports are the ones with gettext as a run-dependency
according to ports/INDEX-7 (5007 of them) and the ones with USE_GETTEXT
in Makefile (29 of them).

PR:             ports/124340
Submitted by:   edwin@
Approved by:    portmgr (pav)
25 May 2007 05:55:36
Original commit files touched by this commit  1.6.0_1
dinoex search for other commits by this committer
- update for gnustep-make-2.0.0
19 May 2007 20:32:57
Original commit files touched by this commit  1.6.0_1
flz search for other commits by this committer
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
31 Jan 2007 18:18:14
Original commit files touched by this commit  1.6.0
dinoex search for other commits by this committer
- add category gnustep
PR:             103931
Approved by:    pav
30 Dec 2006 09:20:54
Original commit files touched by this commit  1.6.0
dinoex search for other commits by this committer
The BioCocoa framework provides developers with the opportunity to add
support for reading and writing BEAST, Clustal, EMBL, Fasta, GCG-MSF, GDE,
Hennig86, NCBI, NEXUS, NONA, PDB, Phylip, PIR, Plain/Raw, Swiss-Prot and
TNT files by writing only three lines of code.
The framework is written in Cocoa (Objective-C).

WWW: http://bioinformatics.org/biococoa/

Number of commits found: 11

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