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I am looking for an LTO tape library. Do you have one to spare?
non port: head/biology/biojava/Makefile
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Number of commits found: 27

Sat, 8 Mar 2014
[ 16:39 antoine ] Original commit 
347521 biology/biojava/Makefile
Unbreak
Fri, 7 Mar 2014
[ 15:52 bapt ] Original commit 
347402 benchmarks/netio/Makefile
347402 benchmarks/pybench/Makefile
347402 benchmarks/scimark2/Makefile
347402 benchmarks/scimark2c/Makefile
347402 biology/biojava/Makefile
347402 biology/blat/Makefile
347402 biology/libsbml/Makefile
347402 biology/plink/Makefile
347402 biology/seqan/Makefile
Convert b* to USES=zip
Fri, 21 Feb 2014
[ 13:35 ehaupt ] Original commit 
345397 biology/biojava/Makefile
345397 biology/consed/Makefile
345397 biology/finchtv/Makefile
345397 biology/genpak/Makefile
345397 biology/mummer/Makefile
345397 biology/njplot/Makefile
345397 biology/p5-bioperl-run/Makefile
345397 biology/p5-bioperl/Makefile
345397 biology/paml/Makefile
345397 biology/velvet/Makefile
Remove trailing whitespaces from category biology
Mon, 10 Feb 2014
[ 13:54 ehaupt ] Original commit 
343634 archivers/aolserver-nszlib/Makefile
343634 archivers/dact/Makefile
343634 archivers/freeze/Makefile
343634 archivers/javatar/Makefile
343634 archivers/lha-ac/Makefile
343634 archivers/libpar2/Makefile
343634 archivers/lzo2/Makefile
343634 archivers/makeself/Makefile
343634 archivers/py-lzma/Makefile
343634 archivers/ruby-libarchive/Makefile

(Only the first 10 of 581 ports in this commit are shown above. View all ports for this commit)
According to the Porter's Handbook (5.12.2.3.) default options must be added to
OPTIONS_DEFINE. This policy has been implemented only recently that's why we
have many ports violating this policy.

This patch adds the default options specified in the Porter's Handbook to
OPTIONS_DEFINE where they are being used. Ports maintained by
gnome@FreeBSD.org, kde@FreeBSD.org and x11@FreeBSD.org have been excluded.

Approved by:    portmgr (bapt)
Fri, 3 Jan 2014
[ 15:46 adamw ] Original commit 
338550 biology/biojava/Makefile
338550 biology/blast/Makefile
338550 biology/consed/Makefile
338550 biology/finchtv/Makefile
338550 biology/mafft/Makefile
338550 biology/mummer/Makefile
338550 biology/njplot/Makefile
338550 biology/p5-bioperl-run/Makefile
338550 biology/p5-bioperl/Makefile
338550 biology/paml/Makefile

(Only the first 10 of 14 ports in this commit are shown above. View all ports for this commit)
Convert biology to MDOCS and MEXAMPLES
Fri, 20 Sep 2013
[ 15:55 bapt ] Original commit 
327709 biology/ariadne/Makefile
327709 biology/artemis/Makefile
327709 biology/avida/Makefile
327709 biology/babel/Makefile
327709 biology/biococoa/Makefile
327709 biology/biojava/Makefile
327709 biology/blast/Makefile
327709 biology/blat/Makefile
327709 biology/boinc-simap/Makefile
327709 biology/chemeq/Makefile

(Only the first 10 of 94 ports in this commit are shown above. View all ports for this commit)
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Tue, 11 Dec 2012
[ 07:26 bapt ] Original commit 
308665 biology/biojava/Makefile
Remove hardcoded extract dependency on diablo-jdk16, directly use USE_ZIP
instead given that jar files are just zip files, remove hardcoded do extract
target.

Reported by:	linimon, matthew
Mon, 10 Dec 2012
[ 13:18 bapt ] Original commit 
308604 accessibility/java-access-bridge/Makefile
308604 archivers/javatar/Makefile
308604 archivers/jzip.org/Makefile
308604 archivers/jzlib/Makefile
308604 astro/josm/Makefile
308604 astro/openmap/Makefile
308604 audio/gervill/Makefile
308604 audio/jid3lib/Makefile
308604 audio/jmusic/Makefile
308604 audio/jxm/Makefile

(Only the first 10 of 172 ports in this commit are shown above. View all ports for this commit)
Decommissioning java 1.5 (EOLed since October 2009):
suppress any reference to JAVA_VERSION=	1.5+ (part2)
Sun, 29 Jul 2012
[ 11:17 cs ] Original commit 
301684 archivers/jzip.org/Makefile
301684 astro/osmosis/Makefile
301684 biology/biojava/Makefile
301684 chinese/gcin/Makefile
301684 chinese/ttf2pt1/Makefile
301684 devel/byaccj/Makefile
301684 devel/fpc-fcl-json/Makefile
301684 devel/jsl/Makefile
301684 devel/json-c/Makefile
301684 devel/libcli/Makefile

(Only the first 10 of 181 ports in this commit are shown above. View all ports for this commit)
Fix typos in COMMENT

Approved by:	portmgr@ (implicit)
Fri, 1 May 2009
[ 09:33 miwi ] Original commit 
1.18 biology/biojava/Makefile
1.7 biology/biojava/distinfo
1.3 biology/biojava/files/patch-build.xml
1.8 biology/biojava/pkg-plist
- Update to 1.7
- Pass maintainership to submitter

PR:             134056
Submitted by:   Wen Heping <wenheping@gmail.com>
Mon, 8 Dec 2008
[ 06:43 linimon ] Original commit 
1.17 biology/biojava/Makefile
1.9 databases/jakarta-commons-dbutils/Makefile
1.9 databases/jrobin/Makefile
1.11 devel/doctorj/Makefile
1.6 devel/flexjson/Makefile
1.11 devel/jakarta-commons-io/Makefile
1.7 devel/jakarta-commons-jxpath/Makefile
1.8 devel/jakarta-commons-modeler/Makefile
1.13 devel/nant/Makefile
1.9 devel/ruby-calendar/Makefile

(Only the first 10 of 31 ports in this commit are shown above. View all ports for this commit)
Reset nemoliu due to maintainer-timeouts and no response to email.

Hat:    portmgr
Fri, 6 Jun 2008
[ 13:08 edwin ] Original commit 
1.26 biology/L-Breeder/Makefile
1.16 biology/adun/Makefile
1.11 biology/artemis/Makefile
1.4 biology/biococoa/Makefile
1.16 biology/biojava/Makefile
1.8 biology/boinc-simap/Makefile
1.10 biology/gff2ps/Makefile
1.33 biology/gperiodic/Makefile
1.3 biology/jalview/Makefile
1.16 biology/lsysexp/Makefile

(Only the first 10 of 13 ports in this commit are shown above. View all ports for this commit)
Bump portrevision due to upgrade of devel/gettext.

The affected ports are the ones with gettext as a run-dependency
according to ports/INDEX-7 (5007 of them) and the ones with USE_GETTEXT
in Makefile (29 of them).

PR:             ports/124340
Submitted by:   edwin@
Approved by:    portmgr (pav)
Sat, 19 May 2007
[ 20:32 flz ] Original commit 
1.1364 MOVED
1.566 Mk/bsd.port.mk
1.1 Mk/bsd.xorg.mk
1.1 Tools/scripts/mergebase.sh
1.502 UPDATING
1.2 accessibility/at-poke/Makefile
1.60 accessibility/at-spi/Makefile
1.29 accessibility/at-spi/pkg-plist
1.51 accessibility/atk/Makefile
1.27 accessibility/atk/pkg-plist

(Only the first 10 of 7868 ports in this commit are shown above. View all ports for this commit)
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
Mon, 30 Apr 2007
[ 06:27 nemoliu ] Original commit 
1.14 biology/biojava/Makefile
1.4 databases/jakarta-commons-dbutils/Makefile
1.8 devel/doctorj/Makefile
1.2 devel/flexjson/Makefile
1.6 devel/jakarta-commons-io/Makefile
1.3 devel/jakarta-commons-jxpath/Makefile
1.2 devel/jakarta-commons-modeler/Makefile
1.11 devel/nant/Makefile
1.4 devel/tinylaf/Makefile
1.23 games/robocode/Makefile

(Only the first 10 of 29 ports in this commit are shown above. View all ports for this commit)
Use my @FreeBSD.org address.

Approved by:    delphij (mentor)
Tue, 27 Mar 2007
[ 08:01 miwi ] Original commit 
1.13 biology/biojava/Makefile
1.6 biology/biojava/distinfo
1.2 biology/biojava/files/patch-build.xml
- Update to 1.5-beta2
- Pass maintainership to submitter

PR:             110621
Submitted by:   Nemo Liu<nemoliu@gmail.com>
Sun, 11 Feb 2007
[ 01:23 kris ] Original commit 
1.18 audio/marlin/Makefile
1.5 audio/raop_play/Makefile
1.5 audio/x4x/Makefile
1.29 audio/xmms-uade/Makefile
1.12 biology/biojava/Makefile
1.9 chinese/tatter-tools/Makefile
1.12 chinese/vim-scdoc/Makefile
1.31 databases/mergeant/Makefile
1.5 databases/pecl-paradox/Makefile
1.4 databases/py-sqlite3/Makefile

(Only the first 10 of 64 ports in this commit are shown above. View all ports for this commit)
Schedule these broken ports for removal on 2007-04-10 if they are still
broken at that time and no fix has been submitted.
Mon, 5 Feb 2007
[ 00:08 kris ] Original commit 
1.11 biology/biojava/Makefile
BROKEN: Does not build
Wed, 13 Dec 2006
[ 12:56 linimon ] Original commit 
1.10 biology/biojava/Makefile
1.6 databases/pgpool/Makefile
1.3 databases/py-dbutils/Makefile
1.10 databases/py-sqlobject/Makefile
1.6 devel/jep/Makefile
1.2 devel/py-configobj/Makefile
1.3 devel/py-kid/Makefile
1.5 devel/py-ll-core/Makefile
1.3 graphics/freeimage/Makefile
1.5 graphics/py-freeimagepy/Makefile

(Only the first 10 of 18 ports in this commit are shown above. View all ports for this commit)
Reset whitekid@gmail.com after timeouts and no response to email.

Hat:            portmgr
Tue, 21 Nov 2006
[ 22:35 thierry ] Original commit 
1.9 biology/biojava/Makefile
1.5 biology/biojava/distinfo
1.1 biology/biojava/files/patch-build.xml
1.7 biology/biojava/pkg-plist
- Upgrade to the latest beta and unbreak;

- Add a regression-test target;

- Fix plist for WITHOUT_SAMPLES.

PR:             ports/104685
Approved by:    maintainer's time-out (1 month)
Sat, 2 Sep 2006
[ 16:51 kris ] Original commit 
1.6 arabic/ae_fonts_ttf/Makefile
1.6 arabic/kacst_fonts/Makefile
1.15 archivers/dpkg/Makefile
1.37 audio/festival+OGI/Makefile
1.9 audio/gstreamer-plugins-faad80/Makefile
1.3 biology/belvu/Makefile
1.8 biology/biojava/Makefile
1.8 chinese/iiimf-le-chewing/Makefile
1.6 databases/glom/Makefile
1.29 databases/mergeant/Makefile

(Only the first 10 of 108 ports in this commit are shown above. View all ports for this commit)
Schedule these broken ports for termination on 2006-12-01
Sat, 22 Apr 2006
[ 22:09 kris ] Original commit 
1.7 biology/biojava/Makefile
BROKEN: Does not compile
Mon, 22 Nov 2004
[ 15:47 vs ] Original commit 
1.6 biology/biojava/Makefile
1.3 biology/biojava/distinfo
1.6 biology/biojava/pkg-plist
- Update biology/biojava to 1.30
- Install javadoc and example files
- Assign maintainership to submitter

PR:             ports/73391
Submitted by:   Cheng-Dae Choe
Add. reviewing: hq@
Sun, 2 Nov 2003
[ 02:48 edwin ] Original commit 
1.10 benchmarks/tmetric/Makefile
1.5 biology/biojava/Makefile
1.9 biology/sim4/Makefile
1.3 chinese/gb2jis/Makefile
1.3 chinese/jis2gb/Makefile
1.2 deskutils/ljcharm/Makefile
1.8 devel/entity/Makefile
1.7 editors/vilearn/Makefile
1.9 games/gleyes/Makefile
1.33 games/nethack33-nox11/Makefile

(Only the first 10 of 40 ports in this commit are shown above. View all ports for this commit)
ports with possibly unreachable MAINTAINERs
*** addresses that seem to be dead:

PR:             ports/58694
Submitted by:   Oliver Eikemeier <eikemeier@fillmore-labs.com>
Fri, 21 Feb 2003
[ 11:01 knu ] Original commit 
1.4 biology/L-Breeder/Makefile
1.2 biology/L-Breeder/pkg-comment
1.2 biology/act/Makefile
1.2 biology/act/pkg-comment
1.2 biology/artemis/Makefile
1.2 biology/artemis/pkg-comment
1.4 biology/avida/Makefile
1.2 biology/avida/pkg-comment
1.4 biology/biojava/Makefile
1.2 biology/biojava/pkg-comment

(Only the first 10 of 72 ports in this commit are shown above. View all ports for this commit)
De-pkg-comment.
Sun, 16 Jun 2002
[ 01:08 glewis ] Original commit 
1.3 biology/biojava/Makefile
1.3 biology/biojava/pkg-plist
Unbreak this port:

. Fix dependencies to be in sync with the recent JDK ports renaming.
. Replace MASTER_SITES with a location that actually contains the
  source.
. Fix the packing list.

Note that there is a much newer version of this application available,
but that is beyond the scope of what I was trying to do (just fix the
JDK dependency), as is the last two items.
Sun, 8 Jul 2001
[ 19:15 ijliao ]  
unknown biology/biojava/Makefile
unknown biology/biojava/pkg-plist
unknown biology/fastdnaml/Makefile
unknown biology/fastdnaml/pkg-plist
unknown biology/molden/pkg-plist
unknown biology/mopac/pkg-plist
unknown biology/psi88/Makefile
unknown biology/psi88/pkg-plist
unknown biology/tinker/pkg-plist
unknown biology/tinker/pkg-plist.viewer

(Only the first 10 of 11 ports in this commit are shown above. View all ports for this commit)
Add NOPORTDOCS support to pkg-plist    
Tue, 10 Oct 2000
[ 12:14 jeh ]  
unknown biology/biojava/Makefile
unknown biology/biojava/distinfo
unknown biology/biojava/pkg-comment
unknown biology/biojava/pkg-descr
unknown biology/biojava/pkg-plist
Initial import of biology/biojava    

Number of commits found: 27

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