blast 2.0_20060322 biology =1

IGNORE: You must manually fetch wu-blast2 for the FreeBSD platform (blast2.freebsd-6.x-x64.tar.Z) from http://blast.wustl.edu/licensing, place it in /usr/ports/distfiles and then run make again
RESTRICTED: License does not allow redistribution of binaries. You should first register for the software, which is free for academic use.
WU BLAST, a software package for sequence similarity searches
Maintained by: fernan@iib.unsam.edu.ar
Port Added: 11 Nov 2004 21:47:25
License: not specified in port

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Washington University BLAST (WU BLAST) version 2.0 is a powerful
software package for gene and protein identification, using sensitive,
selective and rapid similarity searches of protein and nucleotide
sequence databases. WU BLAST 2.0 builds upon WU BLAST 1.4, which in turn
was based on the public domain NCBI BLAST version 1.4. While NCBI BLAST
and WU BLAST 1.4 are in the public domain, WU BLAST 2.0 contains
significant new features and extended capabilities, the development of
which began in late 1994, at Washington University in Saint Louis. First
released in May 1996, or more than a year ahead of the NCBI, WU BLAST
2.0 is the original gapped BLAST with statistics and is known for
setting higher standards for sensitivity, speed, correctness and
accuracy, scalability and reliability than competing programs and
implementations. WU BLAST is neither a re-hashed nor "Mac-ified" version
of NCBI BLAST, although WU BLAST in many ways is easier to use. WU BLAST
essentially shares no code with NCBI BLAST, except for portions that
both packages derived from ungapped NCBI BLAST 1.4.

WWW: http://blast.wustl.edu

CVSWeb : Sources : Main Web Site : Distfiles Availability : PortsMonThere are no ports dependent upon this port

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To install the port: cd /usr/ports/biology/blast/ && make install clean

A package is not available for ports marked as: Forbidden / Broken / Ignore / Restricted

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Configuration Options

     No options to configure

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Master Sites:

ftp://ftp.FreeBSD.org/pub/FreeBSD/ports/distfiles/

- Get Rid MD5 support

- SUB_FILES += pkg-message

PR:             ports/142407
Submitted by:   Sevan Janiyan <venture37@geeklan.co.uk>
Approved by:    Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)

- Remove conditional checks relevant only on FreeBSD 5.x and older

Remove always-false/true conditions based on OSVERSION 500000

[patch] cleanup non-supported FreeBSD versions

PR:             ports/111725
Submitted by:   Edwin Groothuis <edwin@mavetju.org>
Approved by:    maintainer timeout

- Update PORTREVISION to match latest release (see main web site)
- Update the port to add other architectures (amd64)

PR:             ports/98764
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)

- Update to 2.0.20060101

PR:             ports/91715
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)

From the PR:

  I've added PORTREVISION to the port and set it to the release
  date as in the lang/gcc* ports.  Since the distinfo file is not
  used, this would help users know when they have to update their
  ports.

  Although newer release might be made, the idea is to bump
  PORTREVISION for important feature releases on when significant
  bugs are fixed.

  Other minor (cosmetic) changes also applied.

PR:             ports/78963
Sumbitted by:   maintainer

- Distfiles change every few days, so drop md5 checking on them

Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)

Add blast, a powerful software package for gene and protein identification,
using sensitive, selective and rapid similarity searches of protein and
nucleotide sequence databases.

PR:             ports/69636
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar>

12 vulnerabilities affecting 17 ports have been reported in the past 14 days

^* - modified, not new

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