FreshPorts -- The Place For Ports notbug Fri, 25 May 2012 10:22 PM BST
Port details
blast 2.0_20060322 biology on this many watch lists=1 search for ports that depend on this port
Ignore IGNORE: You must manually fetch wu-blast2 for the FreeBSD platform (blast2.freebsd-6.x-x64.tar.Z) from http://blast.wustl.edu/licensing, place it in /usr/ports/distfiles and then run make again
Restricted RESTRICTED: License does not allow redistribution of binaries. You should first register for the software, which is free for academic use.
WU BLAST, a software package for sequence similarity searches
Maintained by: fernan@iib.unsam.edu.ar search for ports maintained by this maintainer
Port Added: 11 Nov 2004 21:47:25
License: not specified in port


Washington University BLAST (WU BLAST) version 2.0 is a powerful
software package for gene and protein identification, using sensitive,
selective and rapid similarity searches of protein and nucleotide
sequence databases. WU BLAST 2.0 builds upon WU BLAST 1.4, which in turn
was based on the public domain NCBI BLAST version 1.4. While NCBI BLAST
and WU BLAST 1.4 are in the public domain, WU BLAST 2.0 contains
significant new features and extended capabilities, the development of
which began in late 1994, at Washington University in Saint Louis. First
released in May 1996, or more than a year ahead of the NCBI, WU BLAST
2.0 is the original gapped BLAST with statistics and is known for
setting higher standards for sensitivity, speed, correctness and
accuracy, scalability and reliability than competing programs and
implementations. WU BLAST is neither a re-hashed nor "Mac-ified" version
of NCBI BLAST, although WU BLAST in many ways is easier to use. WU BLAST
essentially shares no code with NCBI BLAST, except for portions that
both packages derived from ungapped NCBI BLAST 1.4.

WWW: http://blast.wustl.edu
CVSWeb : Sources : Main Web Site : Distfiles Availability : PortsMonThere are no ports dependent upon this port

To install the port: cd /usr/ports/biology/blast/ && make install clean

A package is not available for ports marked as: Forbidden / Broken / Ignore / Restricted


Configuration Options
     No options to configure

Master Sites:
ftp://ftp.FreeBSD.org/pub/FreeBSD/ports/distfiles/

Number of commits found: 10

Commit History - (may be incomplete: see CVSWeb link above for full details)
DateByDescription
19 Mar 2011 12:38:54
Original commit files touched by this commit  2.0_20060322
miwi search for other commits by this committer
- Get Rid MD5 support
09 Jan 2010 23:51:26
Original commit files touched by this commit  2.0_20060322
pgollucci search for other commits by this committer
- SUB_FILES += pkg-message

PR:             ports/142407
Submitted by:   Sevan Janiyan <venture37@geeklan.co.uk>
Approved by:    Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
05 Jan 2009 17:27:29
Original commit files touched by this commit  2.0_20060322
pav search for other commits by this committer
- Remove conditional checks relevant only on FreeBSD 5.x and older
04 Oct 2007 00:15:01
Original commit files touched by this commit  2.0_20060322
edwin search for other commits by this committer
Remove always-false/true conditions based on OSVERSION 500000
02 May 2007 07:14:50
Original commit files touched by this commit  2.0_20060322
edwin search for other commits by this committer
[patch] cleanup non-supported FreeBSD versions

PR:             ports/111725
Submitted by:   Edwin Groothuis <edwin@mavetju.org>
Approved by:    maintainer timeout
11 Jun 2006 09:13:43
Original commit files touched by this commit  2.0_20060322
pav search for other commits by this committer
- Update PORTREVISION to match latest release (see main web site)
- Update the port to add other architectures (amd64)

PR:             ports/98764
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
14 Jan 2006 19:36:19
Original commit files touched by this commit  2.0_20060101
pav search for other commits by this committer
- Update to 2.0.20060101

PR:             ports/91715
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
18 Mar 2005 13:01:08
Original commit files touched by this commit  2.0_20050316
danfe search for other commits by this committer
From the PR:

  I've added PORTREVISION to the port and set it to the release
  date as in the lang/gcc* ports.  Since the distinfo file is not
  used, this would help users know when they have to update their
  ports.

  Although newer release might be made, the idea is to bump
  PORTREVISION for important feature releases on when significant
  bugs are fixed.

  Other minor (cosmetic) changes also applied.

PR:             ports/78963
Sumbitted by:   maintainer
18 Nov 2004 07:58:42
Original commit files touched by this commit  2.0
pav search for other commits by this committer
- Distfiles change every few days, so drop md5 checking on them

Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
11 Nov 2004 21:35:04
Original commit files touched by this commit  2.0
pav search for other commits by this committer
Add blast, a powerful software package for gene and protein identification,
using sensitive, selective and rapid similarity searches of protein and
nucleotide sequence databases.

PR:             ports/69636
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar>

Number of commits found: 10

Login
User Login
Create account

Servers and bandwidth provided by
New York Internet
SuperNews

Search
Enter Keywords:
 
more...

Latest Vulnerabilities
haproxyMay 24
foswikiMay 21
inspircd*May 21
inspircd12*May 21
sympaMay 21
sympa5May 21
libxml2May 18
pidgin-otrMay 16
sudoMay 16
chromiumMay 15
chromiumMay 15
pivotx*May 14
socatMay 14
libpurpleMay 12
php5May 12

12 vulnerabilities affecting 17 ports have been reported in the past 14 days

* - modified, not new

All vulnerabilities


Ports
Home
Categories
Deleted ports
Sanity Test Failures
Newsfeeds


Statistics
Graphs
NEW Graphs (Javascript)
Traffic

Calculated hourly:
Port count 23670
Broken 192
Deprecated 147
Ignore 734
Forbidden 3
Restricted 328
No CDROM 110
Vulnerable 0
Expired 41
Set to expire 188
Interactive 54
new 24 hours 30
new 48 hours33
new 7 days60
new fortnight182
new month255

This site
What is FreshPorts?
About the Authors
FAQ
How big is it?
The latest upgrade!
Privacy
Forums
Blog
Contact

Servers and bandwidth provided by
New York Internet
SuperNews
Valid HTML, CSS, and RSS.
Copyright © 2000-2012 DVL Software Limited. All rights reserved.
This page created in 0.034 seconds.