dna-qc 1993.07.26 biology =0

A quality control algorithm for DNA sequencing projects

There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org
Port Added: 19 Dec 2001 00:20:48
License: not specified in port

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"relevant reference:
White, O., T. Dunning, G. Sutton, M. Adams, J. C. Venter, and C.
Fields (1993). A quality control algorithm for DNA sequencing
projects.  Nucleic Acids Research (in press)."
- from the README file

CVSWeb : Sources : Distfiles Availability : PortsMonThere are no ports dependent upon this port

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To install the port: cd /usr/ports/biology/dna-qc/ && make install clean
To add the package: pkg_add -r dna-qc

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Configuration Options

     No options to configure

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Master Sites:

ftp://ftp.tigr.org/pub/software/qc/

ftp://ftp.FreeBSD.org/pub/FreeBSD/ports/distfiles/

- Get Rid MD5 support

BROKEN should not be quoted.
No functional change.

For ports maintained by ports@FreeBSD.org, remove names and/or
e-mail addresses from the pkg-descr file that could reasonably
be mistaken for maintainer contact information in order to avoid
confusion on the part of users looking for support. As a pleasant
side effect this also avoids confusion and/or frustration for people
who are no longer maintaining those ports.

Remove always-true condition due to OSVERSION

Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response
to email.

Hat:            portmgr

Remove USE_REINPLACE from all categories starting with B

SHA256ify (manually done and checked)

Approved by:    krion@

Fix maintainer address

    From: Tony Maher <anthony.maher@uts.edu.au>
    To: Edwin Groothuis <edwin@FreeBSD.org>
    Subject: Re: ports/91537: maths/xgobi - download site moved/maintainer
addressupdate

    Actually I need  modify all my ports to use OptusNet rather than
    Biolateral.  Is there an easy way to do this or should I submit a
    separate 1-line patch and PR for each port?

    biology/crimap
    biology/dna-qc
    biology/flip
    biology/primer3
    biology/seqio
    biology/wise
    math/xgobi
    net/generic-nqs

Submitted by:   Tony Maher <anthony.maher@uts.edu.au>

BROKEN on alpha 5.x: does not compile

Cosmetic fix: use %%DOCSDIR%% macro.
No functionally changes.

Submitted by:   Oleg Karachevtsev <ok@etrust.ru>
A part of PR:   57992

Make portlint(1) happy by changing strip to ${STRIP_CMD}

Submitted by:   Oleg Karachevtsev <ok@etrust.ru>
PR:             56998

De-pkg-comment.

PERL -> REINPLACE
And some ports have USE_PERL5=yes now.

Add dna-qc 1993.07.26, a quality control algorithm for DNA   sequencing
projects.    

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