fasta 21.1.1 biology =0

NO CDROM: May not be sold or incorporated into a commercial product
A collection of programs for searching DNA and protein databases

There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org
Port Added: 11 Feb 2001 13:24:20
License: not specified in port

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Version 2 of the FASTA packages contains many programs for performing
sequence comparisons, producing local alignments, and other related tasks
for analysing DNA and proteins.

Currently, the FASTA2 suite is in maintenance mode.  This package provides
the analysis tools from FASTA2.  The searching programs are available in
version 3 of the FASTA packages, which may be found in the port
biology/fasta3.

FASTA is described in:  W. R. Pearson and D. J. Lipman (1988), "Improved
Tools for Biological Sequence Analysis", PNAS 85:2444- 2448, and W. R.
Pearson (1990) "Rapid and Sensitive Sequence Comparison with FASTP and FASTA"
Methods in Enzymology 183:63- 98).

The FASTA2 suite is distributed freely subject to the condition that it may
not be sold or incorporated into a commercial product.

WWW:    http://fasta.bioch.virginia.edu/

CVSWeb : Sources : Main Web Site : Distfiles Availability : PortsMonThere are no ports dependent upon this port

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To install the port: cd /usr/ports/biology/fasta/ && make install clean
To add the package: pkg_add -r fasta

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Configuration Options

     No options to configure

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Master Sites:

http://faculty.virginia.edu/wrpearson/fasta/fasta2/

ftp://ftp.ebi.ac.uk/pub/software/unix/fasta/fasta2/

ftp://ftp.FreeBSD.org/pub/FreeBSD/ports/distfiles/

- Get Rid MD5 support

Mark various ports as broken or ignore on powerpc.

While here, remove remnants of alpha.

For ports maintained by ports@FreeBSD.org, remove names and/or
e-mail addresses from the pkg-descr file that could reasonably
be mistaken for maintainer contact information in order to avoid
confusion on the part of users looking for support. As a pleasant
side effect this also avoids confusion and/or frustration for people
who are no longer maintaining those ports.

- Update to 21.1.1

- Update download location

- Update mastersite.

PR:             ports/122130
Submitted by:   Ganael Laplanche <ganael.laplanche@martymac.com>

Update to 21.u1.d1 (fixes fetch).

Reported by:    fenner's distfile survey

Use SUB_FILES for pkg-message

- Add SHA256

With portmgr hat on, reset inactive maintainer.  These ports are now up
for adoption.

Update to fix fetch.  Rework PORTVERSION to be more like biology/fasta3
and pacify portlint.

PR:             ports/67428
Submitted by:   Roman Neuhauser <neuhauser at chello dot cz>
Approved by:    maintainer timeout (one month)

SIZEify (maintainer timeout)

Cosmetic fix: use %%DOCSDIR%% macro.
No functionally changes.

Submitted by:   Oleg Karachevtsev <ok@etrust.ru>
A part of PR:   57992

Clear moonlight beckons.
Requiem mors pacem pkg-comment,
And be calm ports tree.

E Nomini Patri, E Fili, E Spiritu Sancti.

Replace erroneous usage of INSTALL_MAN with INSTALL_DATA.    

Updating my email address in my remaining ports.    

New port: biology/fasta, the FASTA2 suite of DNA and protein sequence   search
tools    

12 vulnerabilities affecting 17 ports have been reported in the past 14 days

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