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I am looking for an LTO tape library. Do you have one to spare?
Port details
fasta 21.1.1 biology on this many watch lists=0 search for ports that depend on this port
NO CDROM NO CDROM: May not be sold or incorporated into a commercial product
Collection of programs for searching DNA and protein databases

There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org search for ports maintained by this maintainer
Port Added: 11 Feb 2001 13:24:20
License: not specified in port


Version 2 of the FASTA packages contains many programs for performing
sequence comparisons, producing local alignments, and other related tasks
for analysing DNA and proteins.

Currently, the FASTA2 suite is in maintenance mode.  This package provides
the analysis tools from FASTA2.  The searching programs are available in
version 3 of the FASTA packages, which may be found in the port
biology/fasta3.

FASTA is described in:  W. R. Pearson and D. J. Lipman (1988), "Improved
Tools for Biological Sequence Analysis", PNAS 85:2444- 2448, and W. R.
Pearson (1990) "Rapid and Sensitive Sequence Comparison with FASTP and FASTA"
Methods in Enzymology 183:63- 98).

The FASTA2 suite is distributed freely subject to the condition that it may
not be sold or incorporated into a commercial product.

WWW: http://fasta.bioch.virginia.edu/
SVNWeb : Main Web Site : Distfiles Availability : PortsMonThere are no ports dependent upon this port

To install the port: cd /usr/ports/biology/fasta/ && make install clean
To add the package: pkg install biology/fasta


Configuration Options
===> The following configuration options are available for fasta-21.1.1:
     DOCS=on: Build and/or install documentation
===> Use 'make config' to modify these settings

Master Sites:
  1. ftp://ftp.FreeBSD.org/pub/FreeBSD/ports/distfiles/
  2. ftp://ftp.ebi.ac.uk/pub/software/unix/fasta/fasta2/
  3. http://faculty.virginia.edu/wrpearson/fasta/fasta2/

Number of commits found: 22

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
24 Mar 2014 09:01:39
Original commit files touched by this commit  21.1.1
Revision:348924
pawel search for other commits by this committer
- Add staging support
- Switch to PORTDOCS
15 Jan 2014 22:50:19
Original commit files touched by this commit  21.1.1
Revision:339843
bapt search for other commits by this committer
Reduce over inclusion of bsd.port.mk
20 Sep 2013 15:55:44
Original commit files touched by this commit  21.1.1
Revision:327709
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
30 Jun 2013 20:53:06
Original commit files touched by this commit  21.1.1
Revision:322100
antoine search for other commits by this committer
Fix some PORT_OPTIONS conversions
19 Jun 2013 18:51:17
Original commit files touched by this commit  21.1.1
Revision:321306
bsam search for other commits by this committer
. NOPORTDOCS -> PORT_OPTIONS:MDOCS;
. use f instead of file for a variable (portlint warns against file);
. do not mute install commands;
. remove article from COMMENT;
. trim Makefile headers;
. pet portlint: use one space after WWW: at pkg-descr.
19 Mar 2011 12:38:54
Original commit files touched by this commit  21.1.1
miwi search for other commits by this committer
- Get Rid MD5 support
01 Apr 2010 05:16:19
Original commit files touched by this commit  21.1.1
linimon search for other commits by this committer
Mark various ports as broken or ignore on powerpc.

While here, remove remnants of alpha.
21 Dec 2009 02:19:12
Original commit files touched by this commit  21.1.1
dougb search for other commits by this committer
For ports maintained by ports@FreeBSD.org, remove names and/or
e-mail addresses from the pkg-descr file that could reasonably
be mistaken for maintainer contact information in order to avoid
confusion on the part of users looking for support. As a pleasant
side effect this also avoids confusion and/or frustration for people
who are no longer maintaining those ports.
18 Nov 2009 05:33:10
Original commit files touched by this commit  21.1.1
wen search for other commits by this committer
- Update to 21.1.1
31 Jan 2009 22:45:38
Original commit files touched by this commit  21.u1.d1
pav search for other commits by this committer
- Update download location
18 Apr 2008 15:36:54
Original commit files touched by this commit  21.u1.d1
jmelo search for other commits by this committer
- Update mastersite.

PR:             ports/122130
Submitted by:   Ganael Laplanche <ganael.laplanche@martymac.com>
07 May 2006 13:04:20
Original commit files touched by this commit  21.u1.d1
lawrance search for other commits by this committer
Update to 21.u1.d1 (fixes fetch).

Reported by:    fenner's distfile survey
01 Apr 2006 12:34:24
Original commit files touched by this commit  21.u1.d0
edwin search for other commits by this committer
Use SUB_FILES for pkg-message
24 Nov 2005 00:04:00
Original commit files touched by this commit  21.u1.d0
pav search for other commits by this committer
- Add SHA256
20 Nov 2004 08:09:49
Original commit files touched by this commit  21.u1.d0
linimon search for other commits by this committer
With portmgr hat on, reset inactive maintainer.  These ports are now up
for adoption.
01 Jul 2004 06:24:01
Original commit files touched by this commit  21.u1.d0
linimon search for other commits by this committer
Update to fix fetch.  Rework PORTVERSION to be more like biology/fasta3
and pacify portlint.

PR:             ports/67428
Submitted by:   Roman Neuhauser <neuhauser at chello dot cz>
Approved by:    maintainer timeout (one month)
31 Mar 2004 03:12:58
Original commit files touched by this commit  20.u66
trevor search for other commits by this committer
SIZEify (maintainer timeout)
22 Oct 2003 09:29:55
Original commit files touched by this commit  20.u66
osa search for other commits by this committer
Cosmetic fix: use %%DOCSDIR%% macro.
No functionally changes.

Submitted by:   Oleg Karachevtsev <ok@etrust.ru>
A part of PR:   57992
07 Mar 2003 05:56:43
Original commit files touched by this commit  20.u66
ade search for other commits by this committer
Clear moonlight beckons.
Requiem mors pacem pkg-comment,
And be calm ports tree.

E Nomini Patri, E Fili, E Spiritu Sancti.
03 Jul 2001 10:07:35
files touched by this commit
wjv search for other commits by this committer
Replace erroneous usage of INSTALL_MAN with INSTALL_DATA.    
27 Jun 2001 11:15:02
files touched by this commit
wjv search for other commits by this committer
Updating my email address in my remaining ports.    
11 Feb 2001 16:24:20
files touched by this commit
jeh search for other commits by this committer
New port: biology/fasta, the FASTA2 suite of DNA and protein sequence   search
tools    

Number of commits found: 22

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