non port: biology/fasta3/Makefile |
Number of commits found: 41 |
Wednesday, 10 Jan 2024
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08:16 Baptiste Daroussin (bapt)
MAN?PREFIX: eleminate its usage and move man to share/man
1b819e4 |
Wednesday, 7 Sep 2022
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21:10 Stefan Eßer (se)
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
This commit implements such a proposal and moves one of the WWW: entries
of each pkg-descr file into the respective port's Makefile. A heuristic
attempts to identify the most relevant URL in case there is more than
one WWW: entry in some pkg-descr file. URLs that are not moved into the
Makefile are prefixed with "See also:" instead of "WWW:" in the pkg-descr
files in order to preserve them.
There are 1256 ports that had no WWW: entries in pkg-descr files. These
ports will not be touched in this commit.
The portlint port has been adjusted to expect a WWW entry in each port
Makefile, and to flag any remaining "WWW:" lines in pkg-descr files as
deprecated.
Approved by: portmgr (tcberner)
b7f0544 |
Wednesday, 20 Jul 2022
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14:20 Tobias C. Berner (tcberner)
biology: remove 'Created by' lines
A big Thank You to the original contributors of these ports:
* Aaron Dalton <aaron@FreeBSD.org>
* Akinori MUSHA aka knu <knu@idaemons.org>
* Andrey Zakhvatov
* Bob Zimmermann <rpz@cse.wustl.edu>
* Camson Huynh <chuynh@biolateral.com.au>
* Dan Siercks <dsiercks@uwm.edu>
* Fernan Aguero <fernan@iib.unsam.edu.ar>
* Hannes Hauswedell <h2+fbsdports@fsfe.org>
* J. Bacon <jwb@FreeBSD.org>
* Jason Bacon <jwb@FreeBSD.org>
* Jeremy <karlj000@unbc.ca>
* Johann Visagie <johann@egenetics.com>
* Johann Visagie <wjv@FreeBSD.org>
* Mauricio Herrera Cuadra <mauricio@arareko.net>
* Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp>
* Motomichi Matsuzaki <mzaki@e-mail.ne.jp>
* Motomichi Matsuzaki <mzaki@m.u-tokyo.ac.jp>
* Motomichi Matsuzaki <mzaki@niid.go.jp>
* Po-Chuan Hsieh <sunpoet@FreeBSD.org>
* Razi Khaja <razi@genet.sickkids.on.ca>
* Reed A. Cartwright <cartwright@asu.edu>
* Ryo MIYAMOTO
* Ryo MIYAMOTO <rmiya@cc.hirosaki-u.ac.jp>
* Sangwoo Shim <sangwoos@gmail.com>
* Sunpoet Po-Chuan Hsieh <sunpoet@FreeBSD.org>
* Tassilo Philipp <tphilipp@potion-studios.com>
* Tony Maher
* Tony Maher <tonym@biolateral.com.au>
* Wen Heping <wen@FreeBSD.org>
* Wen Heping <wenheping@gmail.com>
* Yonatan <onatan@gmail.com>
* Yuri Victorovich <yuri@rawbw.com>
* ballen
* barnhart@genetics.wustl.edu
* camson@bilateral.com.au
* chuynh@biolateral.com.au
* dbader@eece.unm.edu
* frankch@waru.life.nthu.edu.tw
* h2
* lentferj
* maho@FreeBSD.org
* mzaki@biol.s.u-tokyo.ac.jp
* tonym
* wen@FreeBSD.org
With hat: portmgr
37526bb |
Thursday, 6 May 2021
|
11:47 Mathieu Arnold (mat)
Deorbit RESTRICTED && NO_CDROM, part one.
For ports that already use the licenses framwork, merge the content of
RESTRICTED/NO_CDROM/LEGAL* entries into LICENSEs.
Approved by: rene
Differential Revision: https://reviews.freebsd.org/D30010
adb9312 |
Tuesday, 6 Apr 2021
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14:31 Mathieu Arnold (mat)
Remove # $FreeBSD$ from Makefiles.
305f148 |
Friday, 16 Oct 2015
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13:31 danilo
- Update to 36.3.8
- Pass maintainership to submitter
PR: 203817
Submitted by: Wendell Borges <wendell@bsd.com.br>
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Thursday, 7 May 2015
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02:33 wen
- Update to 36.3.7a
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Sunday, 2 Mar 2014
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10:58 marino
biology/fasta3: Checked new distfile and regenerated distinfo to unbreak
Fasta3 distfile was significantly changed. This should have been released
as a new version (e.g. 36.3.6e), so it's not clear why the distfile was
rerolled. There are significant changes to makefiles, conf files and even
a few .c and .h files. They all look like legitimate updates to me
though.
Set DIST_SUBDIR since this port is now known for rerolling, then
regenerate distinfo. Also add Fasta license and bump revision.
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Friday, 3 Jan 2014
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19:46 bapt
Mark as broken: Invalid checksum, seems like the software was rerolled
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Tuesday, 29 Oct 2013
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19:32 pawel
Update to version 36.3.6d
PR: ports/181883
Submitted by: KATO Tsuguru <tkato432@yahoo.com>
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Friday, 20 Sep 2013
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15:55 bapt
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
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Friday, 19 Jul 2013
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14:08 wen
- Update to 36.3.6
- Drop maintainership
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Monday, 1 Oct 2012
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14:55 wen
- Take maintainership
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14:45 tabthorpe
- Reassign to the heap at maintainer's request
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Wednesday, 26 Jan 2011
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20:26 beat
- Update to 36.3.2 to fix distfile fetching on pointyhat
PR: ports/154267
Submitted by: Fernan Aguero <fernan AT iib.unsam.edu.ar> (maintainer)
Feature safe: yes
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Sunday, 23 Aug 2009
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15:47 makc
Update to 35.4.9
PR: ports/137991
Submitted by: Fernan Aguero (maintainer)
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Tuesday, 9 Jun 2009
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07:53 itetcu
- Update to 35.4.7 [1]
- Obey PREFIX [2]
Submitted by: maintainer [1] [2]
Reported by: QATty [2]
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Monday, 23 Feb 2009
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16:12 amdmi3
- Update to 35.4.4
PR: 132007
Submitted by: Fernan Aguero <fernan at iib dot unsam dot edu dot ar>
(maintainer)
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Thursday, 10 Apr 2008
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08:09 clsung
- Update to 35.3.6
PR: ports/122607
Submitted by: maintainer (Fernan Aguero)
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Sunday, 30 Mar 2008
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05:07 rafan
- Update to 35.3.5
- Switch to .tar.gz distfile so that we don't define our do-extract
- While I'm here, using substitution for version numbers in pkg-plist
for easier upgrade
PR: ports/121690
Submitted by: Wen heping <wenheping at gmail.com>
Approved by: maintainer timeout (2 weeks)
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Friday, 9 Mar 2007
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11:26 miwi
- Update to 34.26.2
PR: 110079
Submitted by: Fernan Aguero<fernan@iib.unsam.edu.ar> (maintainer)
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Tuesday, 31 Oct 2006
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09:02 miwi
- Update to 34.t26.b3
PR: ports/104508
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
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Friday, 9 Jun 2006
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19:18 pav
- Update to 34.t25.d9
PR: ports/98761
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
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Monday, 5 Jun 2006
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21:18 erwin
- Update to 34.t25.d8 [1]
- While I'm here, pet portlint [2]
PR: 98398 [1]
Submitted by: miwi [1], self [2]
Approved by: maintainer [1]
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Wednesday, 24 May 2006
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16:55 sem
- update to 34.t25.d7
- add MASTER_SITE_LOCAL as a second master site
PR: ports/97310
Submitted by: maintainer
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Sunday, 21 May 2006
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21:32 kris
BROKEN: Unfetchable
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Sunday, 7 May 2006
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16:52 sem
- Update to 34.t25.d6
PR: ports/96063
Submitted by: maintainer
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Monday, 20 Mar 2006
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22:23 pav
- Update to 34.t25.d5
PR: ports/94741
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
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Friday, 10 Feb 2006
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09:37 lawrance
Update to 34.t25.d4.
PR: ports/93052
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
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Thursday, 1 Jul 2004
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03:02 linimon
Chase mastersite and fix checksum to unbreak. (Changes are inclusion of a
logfile, one Linux-only change, and one change in a test script). Assign
submitter as new maintainer as current one has not responded to PRs for
some time.
PR: ports/68199
Submitted by: Fernan Aguero <fernan at iib dot unsam dot edu dot ar>
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Monday, 21 Jun 2004
|
21:27 kris
Set an expiry date of 2004-08-20 for these BROKEN/IGNORE/FORBIDDEN
ports. They will be removed on or after that date if they are still
broken and no fix has been submitted to GNATS.
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Saturday, 21 Feb 2004
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19:31 kris
BROKEN: Checksum mismatch
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Saturday, 15 Nov 2003
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20:13 marcus
unPERLify by using REINPLACE_CMD and SED where appropriate.
PR: 47654
Submitted by: Simon 'portlint' Schubert <corecode@corecode.ath.cx>
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Friday, 7 Mar 2003
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05:56 ade
Clear moonlight beckons.
Requiem mors pacem pkg-comment,
And be calm ports tree.
E Nomini Patri, E Fili, E Spiritu Sancti.
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Tuesday, 3 Jul 2001
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10:08 wjv
Replace erroneous usage of INSTALL_MAN with INSTALL_DATA.
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Wednesday, 27 Jun 2001
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11:15 wjv
Updating my email address in my remaining ports.
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Monday, 7 May 2001
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13:16 jeh
Updata biology/fasta3 to version 33.t08.d4
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Thursday, 22 Mar 2001
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09:04 sobomax
Update to 33.t08.d3.
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Monday, 12 Mar 2001
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10:24 nbm
- A small bugfix lead to a rerelease without a version number change. - Bumped
PORTREVISION.
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Thursday, 8 Mar 2001
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14:39 sf
update to 33.t08.d2.
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Sunday, 11 Feb 2001
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16:29 jeh
- New port: biology/fasta3, which comprises the FASTA3 suite of DNA and
protein sequence search programs - FASTA3 updates only some of the elements of
FASTA2, which is why I have submitted ports of both versions (as
biology/fasta and biology/fasta3)
|
Number of commits found: 41 |