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Port details
fluctuate Program to fit population models
1.40 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port

There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org search for ports maintained by this maintainer
Port Added: 06 Aug 2001 11:45:39
License: not specified in port
Fluctuate fits the model which has a single population which has been growing
(or shrinking) according to an exponential growth law.  It estimates 4Nu and
g, where N is the effective population size, u is the neutral mutation rate
per site, and g is the growth rate of the population.

Fluctuate forms part of the Lamarc (Likelihood Analysis with Metropolis
Algorithm using Random Coalescence) suite.  See:

  http://evolution.genetics.washington.edu/lamarc.html

WWW: http://evolution.genetics.washington.edu/lamarc/fluctuate.html
SVNWeb : Homepage : PortsMon

To install the port: cd /usr/ports/biology/fluctuate/ && make install clean
To add the package: pkg install fluctuate

PKGNAME: fluctuate

ONLY_FOR_ARCHS: nil

NOT_FOR_ARCHS: nil

distinfo:

SHA256 (fluctuate1.4.src.doc.tar.gz) = 920ce06de2a02e18c149a803f9c5f32657948b88c0c97c5297371949f0cde109
SIZE (fluctuate1.4.src.doc.tar.gz) = 70690

There are no ports dependent upon this port


Configuration Options
===> The following configuration options are available for fluctuate-1.40:
     DOCS=on: Build and/or install documentation
===> Use 'make config' to modify these settings

Master Sites:
  1. http://evolution.gs.washington.edu/lamarc/fluctuate/

Number of commits found: 17

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
19 Nov 2015 00:51:15
Original commit files touched by this commit  1.40
Revision:401907
amdmi3 search for other commits by this committer
- Switch to options helpers
22 May 2015 13:34:22
Original commit files touched by this commit  1.40
Revision:387021
mat search for other commits by this committer
Remove $FreeBSD$ from patches files in categories a-j.

With hat:	portmgr
Sponsored by:	Absolight
16 Feb 2014 11:35:01
Original commit files touched by this commit  1.40
Revision:344536
ehaupt search for other commits by this committer
Support staging
20 Sep 2013 15:55:44
Original commit files touched by this commit  1.40
Revision:327709
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
19 Jun 2013 12:43:28
Original commit files touched by this commit  1.40
Revision:321244
bsam search for other commits by this committer
. NOPORTDOCS -> PORT_OPTIONS:MDOCS;
. use PLIST_FILES and PORTDOCS;
. get rid of  pkg-plist;
. pet portlint: use one space after WWW: at pkg-descr;
. trim Makefile headers;
. remove the indefinite article from COMMENT.
19 Mar 2011 12:38:54
Original commit files touched by this commit  1.40
miwi search for other commits by this committer
- Get Rid MD5 support
21 Dec 2009 02:19:12
Original commit files touched by this commit  1.40
dougb search for other commits by this committer
For ports maintained by ports@FreeBSD.org, remove names and/or
e-mail addresses from the pkg-descr file that could reasonably
be mistaken for maintainer contact information in order to avoid
confusion on the part of users looking for support. As a pleasant
side effect this also avoids confusion and/or frustration for people
who are no longer maintaining those ports.
25 Jan 2007 11:01:25
Original commit files touched by this commit  1.40
vd search for other commits by this committer
Fix master site and un-deprecate
10 Dec 2006 12:37:38
Original commit files touched by this commit  1.40
gabor search for other commits by this committer
- Deprecate
- Set EXPIRATION_DATE

Approved by:    erwin (mentor)
24 Nov 2005 00:04:00
Original commit files touched by this commit  1.40
pav search for other commits by this committer
- Add SHA256
18 Feb 2005 13:41:09
Original commit files touched by this commit  1.40
krion search for other commits by this committer
Readd mistakenly removed patch to honour CC/CFLAGS.
18 Feb 2005 13:39:34
Original commit files touched by this commit  1.40
krion search for other commits by this committer
Update to version 1.40

PR:             ports/77675
Submitted by:   Sam Lawrance <boris at brooknet.com.au>
20 Nov 2004 08:09:49
Original commit files touched by this commit  1.30
linimon search for other commits by this committer
With portmgr hat on, reset inactive maintainer.  These ports are now up
for adoption.
31 Mar 2004 03:12:58
Original commit files touched by this commit  1.30
trevor search for other commits by this committer
SIZEify (maintainer timeout)
22 Oct 2003 09:29:55
Original commit files touched by this commit  1.30
osa search for other commits by this committer
Cosmetic fix: use %%DOCSDIR%% macro.
No functionally changes.

Submitted by:   Oleg Karachevtsev <ok@etrust.ru>
A part of PR:   57992
07 Mar 2003 05:56:43
Original commit files touched by this commit  1.30
ade search for other commits by this committer
Clear moonlight beckons.
Requiem mors pacem pkg-comment,
And be calm ports tree.

E Nomini Patri, E Fili, E Spiritu Sancti.
06 Aug 2001 15:45:39
files touched by this commit
wjv search for other commits by this committer
Add fluctuate 1.30, a program to fit population models.    

Number of commits found: 17

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