garlic 1.5_2 biology =0

Molecular viewer, editor and visualization program
Maintained by: maho@FreeBSD.org
Port Added: 28 Jul 2003 07:41:18

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Free, open source molecular viewer and editor for
protein structure, DNA structure, PDB, molecular rendering,
biological macromolecule.
Atoms may be drawn as spheres of different sizes.
Bonds may be drawn as cylindrical sticks, conical sticks or
as curved surfaces.
Five types of slab are available: planar, spherical,
semi-spherical, cylindrical and semi-cylindrical.
The slab position and thickness are visible in a small window.
Atomic bonds as well as atoms are treated as independent drawable objects.
and more.

WWW: http://garlic.mefos.hr/garlic/

CVSWeb : Sources : Main Web Site : Distfiles Availability : PortsMon

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Required To Build: devel/gmake, x11/libX11
Required To Run: x11/libX11

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To install the port: cd /usr/ports/biology/garlic/ && make install clean
To add the package: pkg_add -r garlic

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Configuration Options

     No options to configure

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Master Sites:

http://garlic.mefos.hr/sources/garlic-1.5/

ftp://ftp.FreeBSD.org/pub/FreeBSD/ports/distfiles/

- Remove unneeded dependency from gtk12/gtk20 [1]
- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Remove X11BASE support in favor of LOCALBASE or PREFIX
- Use USE_LDCONFIG instead of INSTALLS_SHLIB
- Remove unneeded USE_GCC 3.4+

Thanks to all Helpers:
        Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr,
        ehaupt, nox, itetcu, flz, pav

PR:             116263
Tested on:      pointyhat
Approved by:    portmgr (pav)

- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Bump PORTREVISION

Approved by:    portmgr (xorg cleanup)

- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.

Remove USE_REINPLACE from all categories starting with B

Update to 1.5

Submitted by:   distfile survey by kris, fenner

SHA256ify

Approved by:    krion@

At Kris's request, back out the MACHINE_ARCH spelling correction until
after 5.4-RELEASE.

Assist getting more ports working on AMD64 by obeying the
Ports Collection documentation and use 'ARCH' rather than 'MACHINE_ARCH'.

Make portlint happy by replacing space to tab

PR:             65409
Submitted by:   trevor

1) Silent version up without changing the version number
   very minor change in README
2) change WWW: section at pkg-descr
3) SIZEify

Submitted by:   kris via bento

BROKEN: Checksum mismatch

Bump PORTREVISION on all ports that depend on gettext to aid with upgrading.

(Part 2)

silent updates of archives:
a) program: Draw the hydrophobicity function F5
b) documentation: add very minor description not
   related FreeBSD.

1) bump portrevision
2) several clean ups for Makefile

Cosmetic fix: use %%DOCSDIR%% macro.
No functionally changes.

Submitted by:   Oleg Karachevtsev <ok@etrust.ru>
A part of PR:   57992

Silent changes to the port distfile which *not* have significant
functional differences.
just changing very minor change of documatation, adding very minor
functionality and some cleanup for coding

Submitted by:   bento's log

Add USE_XLIB=yes to compile

Submitted by:   kris via bento

A new port garlic, free molecular viewer and editor, free molecular
visualization program, protein structure, DNA structure, PDB,
molecular rendering, biological macromolecule.

3 vulnerabilities affecting 4 ports have been reported in the past 14 days

^* - modified, not new

All vulnerabilities