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Port details
igv Visualization tool for genomic datasets
2.16.0_1 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2.16.0_1Version of this port present on the latest quarterly branch.
Maintainer: yuri@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2018-06-25 23:56:14
Last Update: 2023-04-25 15:17:15
Commit Hash: feb1fa3
Also Listed In: java
License: MIT
WWW:
https://software.broadinstitute.org/software/igv/
Description:
The Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interactive exploration of large, integrated genomic datasets. It supports a wide variety of data types, including array-based and next-generation sequence data, and genomic annotations.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (281 items)
Collapse this list.
  1. /usr/local/share/licenses/igv-2.16.0_1/catalog.mk
  2. /usr/local/share/licenses/igv-2.16.0_1/LICENSE
  3. /usr/local/share/licenses/igv-2.16.0_1/MIT
  4. bin/igv
  5. share/java/classes/igv/AbsoluteLayout-RELEASE110.jar
  6. share/java/classes/igv/annotations-2.16.7.jar
  7. share/java/classes/igv/apache-client-2.16.7.jar
  8. share/java/classes/igv/arns-2.16.7.jar
  9. share/java/classes/igv/auth-2.16.7.jar
  10. share/java/classes/igv/aws-core-2.16.7.jar
  11. share/java/classes/igv/aws-json-protocol-2.16.7.jar
  12. share/java/classes/igv/aws-query-protocol-2.16.7.jar
  13. share/java/classes/igv/aws-xml-protocol-2.16.7.jar
  14. share/java/classes/igv/batik-awt-util-1.11.jar
  15. share/java/classes/igv/batik-codec-1.11.jar
  16. share/java/classes/igv/batik-constants-1.11.jar
  17. share/java/classes/igv/batik-dom-1.11.jar
  18. share/java/classes/igv/batik-ext-1.11.jar
  19. share/java/classes/igv/batik-i18n-1.11.jar
  20. share/java/classes/igv/batik-svggen-1.11.jar
  21. share/java/classes/igv/batik-transcoder-1.11.jar
  22. share/java/classes/igv/batik-util-1.11.jar
  23. share/java/classes/igv/batik-xml-1.11.jar
  24. share/java/classes/igv/cognitoidentity-2.16.7.jar
  25. share/java/classes/igv/commons-codec-1.11.jar
  26. share/java/classes/igv/commons-compress-1.19.jar
  27. share/java/classes/igv/commons-io-2.6.jar
  28. share/java/classes/igv/commons-jexl-2.1.1.jar
  29. share/java/classes/igv/commons-lang3-3.9.jar
  30. share/java/classes/igv/commons-logging-1.2.jar
  31. share/java/classes/igv/commons-math3-3.6.1.jar
  32. share/java/classes/igv/eventstream-1.0.1.jar
  33. share/java/classes/igv/genomes/129S1_SvImJ.chrom.sizes
  34. share/java/classes/igv/genomes/1kg_ref.chrom.sizes
  35. share/java/classes/igv/genomes/1kg_v37.chrom.sizes
  36. share/java/classes/igv/genomes/1kg_v37_alias.tab
  37. share/java/classes/igv/genomes/2019-03-21_Creinhardtii_CC-503_v5.5.chrom.sizes
  38. share/java/classes/igv/genomes/2019-03-21_Creinhardtii_CC-503_v5.6.chrom.sizes
  39. share/java/classes/igv/genomes/2019-03-21_Creinhardtii_CC-503_v5.6_Cp+Mt_v4.4.chrom.sizes
  40. share/java/classes/igv/genomes/ABaumannii_ATCC_17978.chrom.sizes
  41. share/java/classes/igv/genomes/ABaumannii_AYE_uid61637.chrom.sizes
  42. share/java/classes/igv/genomes/AGPv3.31.chrom.sizes
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  44. share/java/classes/igv/genomes/ASM985889v3.chrom.sizes
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  47. share/java/classes/igv/genomes/B73.chrom.sizes
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  50. share/java/classes/igv/genomes/CSavignyi_v2.1.chrom.sizes
  51. share/java/classes/igv/genomes/D.discoideum.chrom.sizes
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  53. share/java/classes/igv/genomes/Foxy4287.chrom.sizes
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  57. share/java/classes/igv/genomes/GSM552910.chrom.sizes
  58. share/java/classes/igv/genomes/GSM552910_alias.tab
  59. share/java/classes/igv/genomes/Glamblia_2.0.chrom.sizes
  60. share/java/classes/igv/genomes/HHV4_Type1.chrom.sizes
  61. share/java/classes/igv/genomes/ITAG2.3.chrom.sizes
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  63. share/java/classes/igv/genomes/M74568.chrom.sizes
  64. share/java/classes/igv/genomes/MusPutFur1.0.chrom.sizes
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  66. share/java/classes/igv/genomes/MusaBalbisianaPKWv1.chrom.sizes
  67. share/java/classes/igv/genomes/NC_000913.2.chrom.sizes
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  91. share/java/classes/igv/genomes/Pf3D7_v9.0_alias.tab
  92. share/java/classes/igv/genomes/PlasmoDB_24.chrom.sizes
  93. share/java/classes/igv/genomes/PlasmoDB_7.0.chrom.sizes
  94. share/java/classes/igv/genomes/PlasmoDB_8.2.chrom.sizes
  95. share/java/classes/igv/genomes/Plasmodium_3D7_v2.1.chrom.sizes
  96. share/java/classes/igv/genomes/Plasmodium_3D7_v5.5.chrom.sizes
  97. share/java/classes/igv/genomes/Plasmodium_6.1.chrom.sizes
  98. share/java/classes/igv/genomes/SL2.31.chrom.sizes
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  100. share/java/classes/igv/genomes/U00096.2.chrom.sizes
  101. share/java/classes/igv/genomes/U00096.2_alias.tab
  102. share/java/classes/igv/genomes/VcholeraeN16961.chrom.sizes
  103. share/java/classes/igv/genomes/WS201.chrom.sizes
  104. share/java/classes/igv/genomes/WS220.chrom.sizes
  105. share/java/classes/igv/genomes/WS220_alias.tab
  106. share/java/classes/igv/genomes/WS245.chrom.sizes
  107. share/java/classes/igv/genomes/Y55.chrom.sizes
  108. share/java/classes/igv/genomes/ZmB73_5a.chrom.sizes
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  110. share/java/classes/igv/genomes/anidulans_4.1.chrom.sizes
  111. share/java/classes/igv/genomes/anidulans_4.1_alias.tab
  112. share/java/classes/igv/genomes/b37.chrom.sizes
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  114. share/java/classes/igv/genomes/bosTau3.chrom.sizes
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  116. share/java/classes/igv/genomes/bosTau4.chrom.sizes
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  118. share/java/classes/igv/genomes/bosTau6.chrom.sizes
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  120. share/java/classes/igv/genomes/bosTau7.chrom.sizes
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  124. share/java/classes/igv/genomes/ca21.chrom.sizes
  125. share/java/classes/igv/genomes/canFam2.chrom.sizes
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  130. share/java/classes/igv/genomes/cavPor3.chrom.sizes
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  134. share/java/classes/igv/genomes/ce6.chrom.sizes
  135. share/java/classes/igv/genomes/danRer10.chrom.sizes
  136. share/java/classes/igv/genomes/danRer11.chrom.sizes
  137. share/java/classes/igv/genomes/danRer6.chrom.sizes
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  139. share/java/classes/igv/genomes/dm2.chrom.sizes
  140. share/java/classes/igv/genomes/dm3.chrom.sizes
  141. share/java/classes/igv/genomes/dm6.chrom.sizes
  142. share/java/classes/igv/genomes/dmel_5.9.chrom.sizes
  143. share/java/classes/igv/genomes/dmel_r5.22.chrom.sizes
  144. share/java/classes/igv/genomes/dmel_r5.33.chrom.sizes
  145. share/java/classes/igv/genomes/dmel_r5.9.chrom.sizes
  146. share/java/classes/igv/genomes/equCab2.chrom.sizes
  147. share/java/classes/igv/genomes/felCat5.chrom.sizes
  148. share/java/classes/igv/genomes/galGal3.chrom.sizes
  149. share/java/classes/igv/genomes/galGal4.chrom.sizes
  150. share/java/classes/igv/genomes/galGal5.chrom.sizes
  151. share/java/classes/igv/genomes/galGal6.chrom.sizes
  152. share/java/classes/igv/genomes/gasAcu1.chrom.sizes
  153. share/java/classes/igv/genomes/gmax10.chrom.sizes
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  155. share/java/classes/igv/genomes/gorGor4.chrom.sizes
  156. share/java/classes/igv/genomes/gorGor6.chrom.sizes
  157. share/java/classes/igv/genomes/hg16.chrom.sizes
  158. share/java/classes/igv/genomes/hg17.chrom.sizes
  159. share/java/classes/igv/genomes/hg18.chrom.sizes
  160. share/java/classes/igv/genomes/hg19.chrom.sizes
  161. share/java/classes/igv/genomes/hg19_alias.tab
  162. share/java/classes/igv/genomes/hg38.chrom.sizes
  163. share/java/classes/igv/genomes/hg38_1kg.chrom.sizes
  164. share/java/classes/igv/genomes/laevis_7.1.chrom.sizes
  165. share/java/classes/igv/genomes/lmjr.chrom.sizes
  166. share/java/classes/igv/genomes/lmjr_4.0.chrom.sizes
  167. share/java/classes/igv/genomes/lmjr_4.0_alias.tab
  168. share/java/classes/igv/genomes/macFas5_chrom.sizes
  169. share/java/classes/igv/genomes/me49.chrom.sizes
  170. share/java/classes/igv/genomes/mg8.chrom.sizes
  171. share/java/classes/igv/genomes/mm10.chrom.sizes
  172. share/java/classes/igv/genomes/mm39.chrom.sizes
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  177. share/java/classes/igv/genomes/nc10.chrom.sizes
  178. share/java/classes/igv/genomes/nc10_alias.tab
  179. share/java/classes/igv/genomes/ncrassa_v3.chrom.sizes
  180. share/java/classes/igv/genomes/osativa_6.1.chrom.sizes
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  183. share/java/classes/igv/genomes/oviAri3.chrom.sizes
  184. share/java/classes/igv/genomes/panPan2.chrom.sizes
  185. share/java/classes/igv/genomes/panTro2.chrom.sizes
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  190. share/java/classes/igv/genomes/ppatens_1.2.chrom.sizes
  191. share/java/classes/igv/genomes/pvivax.chrom.sizes
  192. share/java/classes/igv/genomes/pvivax_alias.tab
  193. share/java/classes/igv/genomes/rheMac10.chrom.sizes
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  208. share/java/classes/igv/genomes/sclerotiorum.chrom.sizes
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  210. share/java/classes/igv/genomes/spombe_1.55.chrom.sizes
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  238. share/java/classes/igv/genomes/zebrafish.chrom.sizes
  239. share/java/classes/igv/gson-2.8.5.jar
  240. share/java/classes/igv/guava-27.0.1-jre.jar
  241. share/java/classes/igv/htsjdk-3.0.0.jar
  242. share/java/classes/igv/http-client-spi-2.16.7.jar
  243. share/java/classes/igv/httpclient-4.5.13.jar
  244. share/java/classes/igv/httpcore-4.4.13.jar
  245. share/java/classes/igv/igv.jar
  246. share/java/classes/igv/j2objc-annotations-1.1.jar
  247. share/java/classes/igv/jackson-annotations-2.12.1.jar
  248. share/java/classes/igv/jackson-core-2.12.1.jar
  249. share/java/classes/igv/jackson-databind-2.12.1.jar
  250. share/java/classes/igv/jide-common-3.7.3.jar
  251. share/java/classes/igv/metrics-spi-2.16.7.jar
  252. share/java/classes/igv/mjson-1.4.1.jar
  253. share/java/classes/igv/netty-buffer-4.1.59.Final.jar
  254. share/java/classes/igv/netty-codec-4.1.59.Final.jar
  255. share/java/classes/igv/netty-codec-http-4.1.59.Final.jar
  256. share/java/classes/igv/netty-common-4.1.59.Final.jar
  257. share/java/classes/igv/netty-handler-4.1.59.Final.jar
  258. share/java/classes/igv/netty-nio-client-2.16.7.jar
  259. share/java/classes/igv/netty-reactive-streams-2.0.4.jar
  260. share/java/classes/igv/netty-reactive-streams-http-2.0.4.jar
  261. share/java/classes/igv/netty-resolver-4.1.59.Final.jar
  262. share/java/classes/igv/netty-transport-4.1.59.Final.jar
  263. share/java/classes/igv/netty-transport-native-epoll-4.1.59.Final-linux-x86_64.jar
  264. share/java/classes/igv/netty-transport-native-unix-common-4.1.59.Final.jar
  265. share/java/classes/igv/ngs-java-2.9.0.jar
  266. share/java/classes/igv/profiles-2.16.7.jar
  267. share/java/classes/igv/protocol-core-2.16.7.jar
  268. share/java/classes/igv/reactive-streams-1.0.3.jar
  269. share/java/classes/igv/regions-2.16.7.jar
  270. share/java/classes/igv/s3-2.16.7.jar
  271. share/java/classes/igv/sdk-core-2.16.7.jar
  272. share/java/classes/igv/slf4j-api-1.7.28.jar
  273. share/java/classes/igv/snappy-java-1.1.8.4.jar
  274. share/java/classes/igv/sts-2.16.7.jar
  275. share/java/classes/igv/swing-layout-1.0.3.jar
  276. share/java/classes/igv/utils-2.16.7.jar
  277. share/java/classes/igv/xmlgraphics-commons-2.3.jar
  278. share/pixmaps/igv.png
  279. @owner
  280. @group
  281. @mode
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Dependency lines:
  • igv>0:biology/igv
To install the port:
cd /usr/ports/biology/igv/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/igv
  • pkg install igv
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: igv
Flavors: there is no flavor information for this port.
distinfo:
TIMESTAMP = 1676844022 SHA256 (igv-2.16.0/tools.png) = 7a619d7770da008d1bc23a60a07f416625ba3a404a3656b8d1bda0de97415d1c SIZE (igv-2.16.0/tools.png) = 5139

Expand this list (4 items)

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SHA256 (igv-2.16.0/igv-2.16.0-deps.tar.gz) = 0d853bfafd5a2688f467b76a57bef2c40043f4f62f69f1c40acbe101ec98919f SIZE (igv-2.16.0/igv-2.16.0-deps.tar.gz) = 29906082 SHA256 (igv-2.16.0/igvteam-igv-v2.16.0_GH0.tar.gz) = 1f214e539f8efb726246d6e1f8c3dab9d8fcd8fbe36042f03f052ee73afac2cb SIZE (igv-2.16.0/igvteam-igv-v2.16.0_GH0.tar.gz) = 53395541

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Packages (timestamps in pop-ups are UTC):
igv
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest2.16.0_12.16.0_1--2.16.0_1---
FreeBSD:13:quarterly2.16.0_12.16.0_1--2.16.0_1-2.16.0_1-
FreeBSD:14:latest2.16.0_12.16.0_1--2.16.0_1--2.16.0_1
FreeBSD:14:quarterly2.16.0_12.16.0_1--2.16.0_1-2.16.0_1-
FreeBSD:15:latest2.16.0_12.16.0_1n/a-n/a---
FreeBSD:15:quarterly--n/a-n/a---
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. openjfx14>0 : java/openjfx14
  2. gradle : devel/gradle6
  3. java : java/openjdk11
Runtime dependencies:
  1. openjfx14>0 : java/openjfx14
  2. java : java/openjdk11
Library dependencies:
  1. libintl.so : devel/gettext-runtime
This port is required by:
for Run
  1. biology/biostar-tools

Configuration Options:
No options to configure
Options name:
biology_igv
USES:
gettext-runtime
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (1 items)
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  1. https://codeload.github.com/igvteam/igv/tar.gz/v2.16.0?dummy=/
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Number of commits found: 22

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
2.16.0_1
25 Apr 2023 15:17:15
commit hash: feb1fa34f58ea796656b86a81c2a2996b0b03c96commit hash: feb1fa34f58ea796656b86a81c2a2996b0b03c96commit hash: feb1fa34f58ea796656b86a81c2a2996b0b03c96commit hash: feb1fa34f58ea796656b86a81c2a2996b0b03c96 files touched by this commit
Christian Weisgerber (naddy) search for other commits by this committer
audio/opus: bump consumers after update to 1.4
2.16.0
20 Feb 2023 07:20:49
commit hash: b021237b2dda0a5c47aa770ea37bf8db96e4951bcommit hash: b021237b2dda0a5c47aa770ea37bf8db96e4951bcommit hash: b021237b2dda0a5c47aa770ea37bf8db96e4951bcommit hash: b021237b2dda0a5c47aa770ea37bf8db96e4951b files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
biology/igv: Update 2.9.4 → 2.16.0

PR:		269690
Reported by:	jwb@
07 Sep 2022 21:58:51
commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4commit hash: fb16dfecae4a6efac9f3a78e0b759fb7a3c53de4 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Remove WWW entries moved into port Makefiles

Commit b7f05445c00f has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
2.9.4
07 Sep 2022 21:10:59
commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 files touched by this commit
Stefan Eßer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
2.9.4
30 Sep 2021 21:23:30
commit hash: 620968a43a5f9bb3fa98ab20f257a4c0d864caa7commit hash: 620968a43a5f9bb3fa98ab20f257a4c0d864caa7commit hash: 620968a43a5f9bb3fa98ab20f257a4c0d864caa7commit hash: 620968a43a5f9bb3fa98ab20f257a4c0d864caa7 files touched by this commit
Rene Ladan (rene) search for other commits by this committer
cleanup: drop support for EOL FreeBSD 11.X

Search criteria used:
- 11.4
- OSREL*
- OSVER*
- *_FreeBSD_11

Input from:
- adridg: devel/qca-legacy
- jbeich: _WITH_DPRINTF, _WITH_GETLINE, GNU bfd workarounds
- sunpoet: security/p5-*OpenSSL*

Reviewed by:	doceng, kde, multimedia, perl, python, ruby, rust
Differential Revision: https://reviews.freebsd.org/D32008
Test Plan: make index
2.9.4
21 Aug 2021 19:08:05
commit hash: 70ea3d275664fd115f4480850009f75adc1dbf16commit hash: 70ea3d275664fd115f4480850009f75adc1dbf16commit hash: 70ea3d275664fd115f4480850009f75adc1dbf16commit hash: 70ea3d275664fd115f4480850009f75adc1dbf16 files touched by this commit
Yuri Victorovich (yuri) search for other commits by this committer
biology/igv: Broken on 11

Reported by:	fallout
2.9.4
27 Jun 2021 09:33:51
commit hash: 68a87e3c5a88c63e0c9db5e83d564ac8f5801df8commit hash: 68a87e3c5a88c63e0c9db5e83d564ac8f5801df8commit hash: 68a87e3c5a88c63e0c9db5e83d564ac8f5801df8commit hash: 68a87e3c5a88c63e0c9db5e83d564ac8f5801df8 files touched by this commit
Guangyuan Yang (ygy) search for other commits by this committer
biology/igv: Fix build

When switching the build dependency from devel/gradle to devel/gradle6,
the build is accidentally broken. This attempts to revert part of the
change and fix build.

Fixes:		55044a2200a4c42b6b653349f0a65dfca3f96f36
Approved by:	lwhsu (mentor, implicit), portmgr (fix build)
2.9.4
27 Jun 2021 01:51:07
commit hash: 55044a2200a4c42b6b653349f0a65dfca3f96f36commit hash: 55044a2200a4c42b6b653349f0a65dfca3f96f36commit hash: 55044a2200a4c42b6b653349f0a65dfca3f96f36commit hash: 55044a2200a4c42b6b653349f0a65dfca3f96f36 files touched by this commit
Guangyuan Yang (ygy) search for other commits by this committer
devel/gradle6: New port

devel/gradle needs to be updated to 7.x, while some ports build failed
under the newer version, including:

- biology/jalview
- biology/igv

Updated them to use this devel/gradle6 until they officially support 7.x.
No functional changes for these ports.

Approved by:	lwhsu (mentor)
2.9.4
07 Apr 2021 08:09:01
commit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455ccommit hash: cf118ccf875508b9a1c570044c93cfcc82bd455c files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
2.9.4
06 Apr 2021 14:31:07
commit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344ebcommit hash: 305f148f482daf30dcf728039d03d019f88344eb files touched by this commit
Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
2.9.4
28 Mar 2021 16:41:33
Revision:569400Original commit files touched by this commit
yuri search for other commits by this committer
biology/igv: Update 2.8.13 -> 2.9.4
2.8.13
30 Nov 2020 17:29:49
Revision:556663Original commit files touched by this commit
yuri search for other commits by this committer
biology/igv: Fix fetch by fixing a small left-over mistake

PR:		250980
Reported by:	jwb
2.8.13
30 Nov 2020 01:06:38
Revision:556609Original commit files touched by this commit
yuri search for other commits by this committer
biology/igv: 2.5.3 -> 2.8.13

PR:		250980
2.5.3
19 Mar 2020 09:33:13
Revision:528706Original commit files touched by this commit
tobik search for other commits by this committer
Deprecate java/openjfx8-devel consumers

Chase r527795 and put a deprecation notice on all openjfx8-devel
dependent ports too.

Also deprecate devel/gradle4 which is only needed to build igv and
openjfx8-devel.
2.5.3
01 Jun 2019 20:49:20
Revision:503255Original commit files touched by this commit
yuri search for other commits by this committer
biology/igv: Update 2.5.2 -> 2.5.3

Reported by:	portscout
2.5.2
11 May 2019 05:59:29
Revision:501223Original commit files touched by this commit
yuri search for other commits by this committer
biology/igv: Update 2.5.0 -> 2.5.2

Reported by:	portscout
2.5.0
04 Apr 2019 04:49:41
Revision:497786Original commit files touched by this commit
yuri search for other commits by this committer
biology/igv: Update 2.4.19 -> 2.5.0

Reported by:	portscout
2.4.19
23 Feb 2019 21:23:51
Revision:493730Original commit files touched by this commit
yuri search for other commits by this committer
biology/igv: Update 2.4.16 -> 2.4.19

Reported by:	portscout
2.4.16
04 Dec 2018 17:53:46
Revision:486619Original commit files touched by this commit
yuri search for other commits by this committer
devel/gradle: Update to 5.0

Change biology/igv and biology/gatk to gradle4 due to build failures with
gradle5.

PR:		233623
Approved by:	gasol.wu@gmail.com (maintainer)
2.4.16
18 Nov 2018 20:02:41
Revision:485255Original commit files touched by this commit
yuri search for other commits by this committer
biology/igv: Update 2.4.15 -> 2.4.16

Reported by:	portscout
2.4.15
04 Nov 2018 22:55:24
Revision:484156Original commit files touched by this commit
yuri search for other commits by this committer
biology/igv: Update 2.4.10 -> 2.4.15

Port changes:
* Change to gradle, corresponding updates in build, install, environment, etc.

Reported by:	portscout
2.4.10
25 Jun 2018 23:56:01
Revision:473356Original commit files touched by this commit
yuri search for other commits by this committer
New port: biology/igv: Visualization tool for genomic datasets

Number of commits found: 22