mummer 3.20 biology =0

A modular system for rapid whole genome alignment
Maintained by: Anthony.Maher@uts.edu.au
Port Added: 14 Dec 2007 20:56:11

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MUMmer is a modular system for the rapid whole genome alignment of finished
or draft sequence. This package provides an efficient suffix tree library,
seed-and-extend alignment, SNP detection, repeat detection, and
visualization tools.

WWW:	http://mummer.sourceforge.net/

CVSWeb : Sources : Main Web Site : Distfiles Availability : PortsMon

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Required To Build: devel/gmake

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To install the port: cd /usr/ports/biology/mummer/ && make install clean
To add the package: pkg_add -r mummer

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Configuration Options

     No options to configure

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Master Sites:

http://heanet.dl.sourceforge.net/sourceforge/mummer/

http://nchc.dl.sourceforge.net/sourceforge/mummer/

http://kent.dl.sourceforge.net/sourceforge/mummer/

http://easynews.dl.sourceforge.net/sourceforge/mummer/

http://ufpr.dl.sourceforge.net/sourceforge/mummer/

http://umn.dl.sourceforge.net/sourceforge/mummer/

ftp://ftp.FreeBSD.org/pub/FreeBSD/ports/distfiles/

MUMmer is a modular system for the rapid whole genome alignment of finished
or draft sequence. This package provides an efficient suffix tree library,
seed-and-extend alignment, SNP detection, repeat detection, and
visualization tools.

WWW:    http://mummer.sourceforge.net/

PR:             ports/118142
Submitted by:   Tony Maher

10 vulnerabilities affecting 29 ports have been reported in the past 14 days

^* - modified, not new

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