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Port details
ncbi-blast NCBI implementation of Basic Local Alignment Search Tool
2.2.30 biology Deleted on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2.2.30Version of this port present on the latest quarterly branch.
Maintainer: jwbacon@tds.net search for ports maintained by this maintainer
Port Added: 2014-10-06 20:17:07
Last Update: 2014-12-30 20:03:14
SVN Revision: 375848
License: Public_domain
WWW:
http://blast.ncbi.nlm.nih.gov
Description:
The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infer functional and evolutionary relationships between sequences as well as help identify members of gene families. WWW: http://blast.ncbi.nlm.nih.gov
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pkg-plist: as obtained via: make generate-plist
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Dependency lines:
  • ncbiblast>0:biology/ncbi-blast
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This port has been deleted.
PKGNAME: ncbiblast
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Dependencies
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Build dependencies:
  1. gmake : devel/gmake
  2. python2.7 : lang/python27
  3. gcc48 : lang/gcc
  4. as : devel/binutils
  5. perl5.16.3 : lang/perl5.16
Runtime dependencies:
  1. python2.7 : lang/python27
  2. gcc48 : lang/gcc
  3. perl5.16.3 : lang/perl5.16
Library dependencies:
  1. libpcre.so : devel/pcre
  2. libbz2.so : archivers/bzip2
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Master Sites:
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  1. http://distcache.FreeBSD.org/ports-distfiles/
  2. http://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.30/
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Number of commits found: 2

Commit History - (may be incomplete: for full details, see links to repositories near top of page)
CommitCreditsLog message
2.2.30
30 Dec 2014 20:03:14
Revision:375848Original commit files touched by this commit
grembo search for other commits by this committer
Rename biology/ncbi-blast to biology/ncbi-blast+

Approved by:	mentors (implicit)
2.2.30
06 Oct 2014 20:16:35
Revision:370220Original commit files touched by this commit
marino search for other commits by this committer
Add new port biology/ncbi-blast

PR:		190854
Submitted by:	Jason Bacon

The Basic Local Alignment Search Tool (BLAST) finds regions of local
similarity between sequences. The program compares nucleotide or protein
sequences to sequence databases and calculates the statistical
significance of matches. BLAST can be used to infer functional and
evolutionary relationships between sequences as well as help identify
members of gene families.

Number of commits found: 2