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non port: biology/njplot/Makefile

Number of commits found: 15

Monday, 28 Nov 2016
15:19 jrm search for other commits by this committer
biology/njplot: Add site in MASTER_SITES because package builders are
timing out during fetch.

Approved by:	AMDmi3 (mentor)
Differential Revision:	https://reviews.freebsd.org/D8651
Original commitRevision:427329 
Wednesday, 16 Nov 2016
14:52 jrm search for other commits by this committer
biology/njplot: Revive and update to version 2.4

Approved by:	AMDmi3 (mentor)
Differential Revision:	https://reviews.freebsd.org/D8518
Original commitRevision:426241 
Sunday, 25 Oct 2015
19:35 antoine search for other commits by this committer
Deprecate ports broken for more than 6 months
Original commitRevision:400160 
Sunday, 5 Apr 2015
17:55 bapt search for other commits by this committer
Mark as broken unfetchable ports
Original commitRevision:383309 
Sunday, 1 Jun 2014
11:26 ohauer search for other commits by this committer
- add stage support
- add OPTION for X11
- bump PORTREVISION
Original commitRevision:356098 
Friday, 21 Feb 2014
13:35 ehaupt search for other commits by this committer
Remove trailing whitespaces from category biology
Original commitRevision:345397 
Monday, 10 Feb 2014
13:54 ehaupt search for other commits by this committer
According to the Porter's Handbook (5.12.2.3.) default options must be added to
OPTIONS_DEFINE. This policy has been implemented only recently that's why we
have many ports violating this policy.

This patch adds the default options specified in the Porter's Handbook to
OPTIONS_DEFINE where they are being used. Ports maintained by
gnome@FreeBSD.org, kde@FreeBSD.org and x11@FreeBSD.org have been excluded.

Approved by:    portmgr (bapt)
Original commitRevision:343634 
Friday, 3 Jan 2014
15:46 adamw search for other commits by this committer
Convert biology to MDOCS and MEXAMPLES
Original commitRevision:338550 
Sunday, 22 Sep 2013
18:05 bapt search for other commits by this committer
Fix NO_STAGE attribution
Original commitRevision:327888 
Friday, 20 Sep 2013
15:55 bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Original commitRevision:327709 
Wednesday, 10 Jul 2013
07:33 bapt search for other commits by this committer
Convert from USE_MOTIF to USES=motif
Original commitRevision:322624 
Monday, 2 May 2011
12:44 makc search for other commits by this committer
Bump PORTREVISION after open-mofit update
Original commit
Tuesday, 9 Jun 2009
15:33 amdmi3 search for other commits by this committer
Convert most of remaining ports that depend on xorg-libraries to
modular xorg.

- supply corresponding USE_XORG for all imake-using ports that need it
- USE_IMAKE no longer implies USE_XLIB in absence of USE_XORG
- retire USE_X_PREFIX which is not really used anywhere after the
  above change
- a few minor nits like whitespace and SF macro

Tested by:      2 tinderbox runs by pav
Approved by:    portmgr (pav)
Original commit
Saturday, 17 May 2008
16:52 pav search for other commits by this committer
- Update maintainer's email address

Submitted by:   Motomichi Matsuzaki <mzaki@m.u-tokyo.ac.jp> (maintainer)
Original commit
Wednesday, 14 May 2008
14:07 pav search for other commits by this committer
NJplot is a tree drawing program able to draw any phylogenetic tree expressed
in the Newick phylogenetic tree format (e.g., the format used by the PHYLIP
package). NJplot is especially convenient for rooting the unrooted trees
obtained from parsimony, distance or maximum likelihood tree-building methods.

The package contains the following programs:
njplot      - draw phylogenetic trees and interactively modify them
newicktops  - non-interactive version rendering into a PostScript file
newicktotxt - non-interactive version rendering into a text file
unrooted    - draw unrooted circular trees

If you use NJplot in a published work, please cite the following reference:

Perriere, G. and Gouy, M. (1996) WWW-Query: An on-line retrieval system for
biological sequence banks. Biochimie, 78, 364-369.

WWW: http://pbil.univ-lyon1.fr/software/njplot.html

PR:             ports/118438
Submitted by:   Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp>
Original commit

Number of commits found: 15