FreshPorts -- The Place For Ports If you buy from Amazon USA, please support us by using this link.
Follow us
Blog
Twitter

Please give me your LTO-4 or better tape library and I'll put it to good use.
found something from the cache
non port: head/biology/p5-Bio-Glite/Makefile
SVNWeb

Number of commits found: 10

Wed, 26 Nov 2014
[ 13:08 mat ] Original commit 
373448 CHANGES
373448 Mk/Uses/perl5.mk
373448 Mk/bsd.default-versions.mk
373448 Mk/bsd.port.mk
373448 UPDATING
373448 archivers/dpkg/Makefile
373448 archivers/p5-Archive-Any-Lite/Makefile
373448 archivers/p5-Archive-Any-Lite/pkg-plist
373448 archivers/p5-Archive-Any-Plugin-Rar/Makefile
373448 archivers/p5-Archive-Any-Plugin-Rar/pkg-plist

(Only the first 10 of 10077 ports in this commit are shown above. View all ports for this commit)
Change the way Perl modules are installed, update the default Perl to 5.18.

Before, we had:

  site_perl :           lib/perl5/site_perl/5.18
  site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
  perl_man3 :           lib/perl5/5.18/man/man3

Now we have:

  site_perl : lib/perl5/site_perl
  site_arch : lib/perl5/site_perl/mach/5.18
  perl_man3 : lib/perl5/site_perl/man/man3

Modules without any .so will be installed at the same place regardless of the
(Only the first 15 lines of the commit message are shown above View all of this commit message)
Sun, 5 Jan 2014
[ 12:07 az ] Original commit 
338751 biology/p5-Bio-Das/Makefile
338751 biology/p5-Bio-Das/pkg-plist
338751 biology/p5-Bio-Glite/Makefile
338751 biology/p5-Bio-Glite/pkg-plist
338751 biology/p5-Bio-Phylo/Makefile
338751 biology/p5-Bio-Phylo/pkg-plist
338751 devel/p5-Algorithm-SVM/Makefile
338751 devel/p5-Algorithm-SVM/pkg-plist
338751 devel/p5-VCP-Source-cvsbk/Makefile
338751 devel/p5-VCP-Source-cvsbk/pkg-plist

(Only the first 10 of 22 ports in this commit are shown above. View all ports for this commit)
- support stage
Fri, 20 Sep 2013
[ 15:55 bapt ] Original commit 
327709 biology/ariadne/Makefile
327709 biology/artemis/Makefile
327709 biology/avida/Makefile
327709 biology/babel/Makefile
327709 biology/biococoa/Makefile
327709 biology/biojava/Makefile
327709 biology/blast/Makefile
327709 biology/blat/Makefile
327709 biology/boinc-simap/Makefile
327709 biology/chemeq/Makefile

(Only the first 10 of 94 ports in this commit are shown above. View all ports for this commit)
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Fri, 2 Aug 2013
[ 18:52 mat ] Original commit 
324174 archivers/p5-Archive-Any/Makefile
324174 archivers/p5-Archive-Extract/Makefile
324174 archivers/p5-Archive-Rar/Makefile
324174 archivers/p5-Archive-SimpleExtractor/Makefile
324174 archivers/p5-Archive-Zip/Makefile
324174 archivers/p5-Compress-LZF/Makefile
324174 archivers/p5-Compress-LZO/Makefile
324174 archivers/p5-Compress-LZW/Makefile
324174 archivers/p5-Mac-Macbinary/Makefile
324174 archivers/p5-POE-Filter-Bzip2/Makefile

(Only the first 10 of 1871 ports in this commit are shown above. View all ports for this commit)
- Convert to new perl framework
- Trim Makefile header
- Remove MAKE_JOBS_SAFE=yes, it's the default.
Fri, 29 Mar 2013
[ 00:44 eadler ] Original commit 
315509 astro/p5-Astro-ADS/Makefile
315509 astro/p5-Astro-Catalog/Makefile
315509 astro/p5-Astro-DSS/Makefile
315509 astro/p5-Astro-SIMBAD-Client/Makefile
315509 astro/p5-Astro-SIMBAD/Makefile
315509 astro/p5-Astro/Makefile
315509 astro/p5-Geo-METAR/Makefile
315509 audio/p5-CDDB/Makefile
315509 audio/p5-CDDB_get/Makefile
315509 audio/p5-Test-Corpus-Audio-MPD/Makefile

(Only the first 10 of 303 ports in this commit are shown above. View all ports for this commit)
For perl@ owned ports:

- Fix COMMENT
- Trim header
Tue, 30 Oct 2012
[ 02:03 wen ] Original commit 
306655 astro/p5-GPS-Babel/Makefile
306655 biology/p5-Bio-Glite/Makefile
306655 databases/p5-DBD-Google/Makefile
306655 devel/p5-Algorithm-Dependency/Makefile
- Reset maintainer to perl@

Feature safe:	yes
[ 01:47 wen ] Original commit 
306652 astro/p5-GPS-Babel/Makefile
306652 biology/p5-Bio-Glite/Makefile
306652 databases/p5-DBD-Google/Makefile
306652 devel/p5-Algorithm-Dependency/Makefile
- Trim Makefile headers
- Reset maintainer to perl@

Feature safe:	yes
Sat, 21 Jan 2012
[ 17:40 eadler ] Original commit 
1.13 astro/p5-Astro-Catalog/Makefile
1.11 astro/p5-Astro-SunTime/Makefile
1.7 astro/py-RO/Makefile
1.10 astro/py-aipy/Makefile
1.3 astro/py-pyfits/Makefile
1.8 audio/calf/Makefile
1.30 audio/gnupod/Makefile
1.3 audio/jack_mixer/Makefile
1.61 audio/muine/Makefile
1.8 audio/p5-Audio-Scrobbler/Makefile

(Only the first 10 of 1326 ports in this commit are shown above. View all ports for this commit)
At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450
ports use BUILD_DEPENDS:= ${RUN_DEPENDS}. This patch fixes ports that are
currently broken. This is a temporary measure until we organically stop using
:= or someone(s) spend a lot of time changing all the ports over.

Explicit duplication > := > = and this just moves ports one step to the left

Approved by:    portmgr
Fri, 29 Jan 2010
[ 14:52 kuriyama ] Original commit 
1.2 astro/p5-Astro-SIMBAD-Client/Makefile
1.27 audio/gnupod/Makefile
1.5 audio/p5-Audio-Scrobbler/Makefile
1.7 audio/p5-Net-DAAP-Client/Makefile
1.8 audio/p5-Net-FreeDB/Makefile
1.17 audio/p5-Xmms/Makefile
1.66 audio/squeezeboxserver/Makefile
1.26 biology/p5-AcePerl/Makefile
1.2 biology/p5-Bio-Glite/Makefile
1.14 biology/p5-Bio-Graphics/Makefile

(Only the first 10 of 11 ports in this commit are shown above. View all ports for this commit)
- Remove unneeded dependencies which is in perl-5.8.9 dist
  (part 19; last!).

Approved by:    portmgr (itetcu)
Thu, 2 Apr 2009
[ 18:24 miwi ] Original commit 
1.105 biology/Makefile
1.1 biology/p5-Bio-Glite/Makefile
1.1 biology/p5-Bio-Glite/distinfo
1.1 biology/p5-Bio-Glite/pkg-descr
1.1 biology/p5-Bio-Glite/pkg-plist
Bio::Glite is an interface to G-language Genome Analysis Environment
through its REST web service (http://www.g-language.org). This module
allows almost everything G-language GAE can do, without installing
all necessary tookits and modules.

Advantage of this module over the standard installation of
G-language GAE package is:
   1. Easy installation from CPAN
   2. Extremely light-weight (less than 1000 lines of code)
   3. Does not require much CPU/RAM (all calculation is done on
the cloud)

Disadvantages includes:
   1. Slower analysis speed
   2. Internet connection is required
   3. No other software interfaces such as the G-language Shell

WWW: http://search.cpan.org/dist/Bio-Glite/

PR:             ports/133273
Submitted by:   Wen Heping <wenheping at gmail.com>

Number of commits found: 10

Login
User Login
Create account

Servers and bandwidth provided by
New York Internet, SuperNews, and RootBSD

This site
What is FreshPorts?
About the authors
FAQ
How big is it?
The latest upgrade!
Privacy
Forums
Blog
Contact

Search
Enter Keywords:
 
more...

Latest Vulnerabilities
cups-filtersJul 03
libressl*Jul 03
linux-c6-openssl*Jul 03
mingw32-openssl*Jul 03
openssl*Jul 03
cinepaint*Jul 01
darktable*Jul 01
dcraw*Jul 01
dcraw-m*Jul 01
exact-image*Jul 01
flphoto*Jul 01
freeimage*Jul 01
kodi*Jul 01
libraw*Jul 01
libxml2Jul 01

26 vulnerabilities affecting 52 ports have been reported in the past 14 days

* - modified, not new

All vulnerabilities


Ports
Home
Categories
Deleted ports
Sanity Test Failures
Newsfeeds

Statistics
Graphs
NEW Graphs (Javascript)
Traffic

Calculated hourly:
Port count 24978
Broken 208
Deprecated 48
Ignore 505
Forbidden 1
Restricted 204
No CDROM 94
Vulnerable 31
Expired 1
Set to expire 36
Interactive 0
new 24 hours 5
new 48 hours16
new 7 days61
new fortnight113
new month194

Servers and bandwidth provided by
New York Internet, SuperNews, and RootBSD
Valid HTML, CSS, and RSS.
Copyright © 2000-2014 Dan Langille. All rights reserved.