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non port: head/biology/p5-Bio-Glite/Makefile
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Number of commits found: 11

Fri, 1 Apr 2016
[ 13:29 mat ] Original commit 
412344 Mk/Uses/gecko.mk
412344 Mk/bsd.fpc.mk
412344 Mk/bsd.gecko.mk
412344 Mk/bsd.port.mk
412344 accessibility/accerciser/Makefile
412344 accessibility/at-spi/Makefile
412344 accessibility/at-spi2-atk/Makefile
412344 accessibility/at-spi2-core/Makefile
412344 accessibility/caribou/Makefile
412344 accessibility/dasher/Makefile

(Only the first 10 of 1009 ports in this commit are shown above. View all ports for this commit)
Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.

With hat:	portmgr
Sponsored by:	Absolight
Wed, 26 Nov 2014
[ 13:08 mat ] Original commit 
373448 CHANGES
373448 Mk/Uses/perl5.mk
373448 Mk/bsd.default-versions.mk
373448 Mk/bsd.port.mk
373448 UPDATING
373448 archivers/dpkg/Makefile
373448 archivers/p5-Archive-Any-Lite/Makefile
373448 archivers/p5-Archive-Any-Lite/pkg-plist
373448 archivers/p5-Archive-Any-Plugin-Rar/Makefile
373448 archivers/p5-Archive-Any-Plugin-Rar/pkg-plist

(Only the first 10 of 10077 ports in this commit are shown above. View all ports for this commit)
Change the way Perl modules are installed, update the default Perl to 5.18.

Before, we had:

  site_perl :           lib/perl5/site_perl/5.18
  site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
  perl_man3 :           lib/perl5/5.18/man/man3

Now we have:

  site_perl : lib/perl5/site_perl
  site_arch : lib/perl5/site_perl/mach/5.18
  perl_man3 : lib/perl5/site_perl/man/man3

Modules without any .so will be installed at the same place regardless of the
(Only the first 15 lines of the commit message are shown above View all of this commit message)
Sun, 5 Jan 2014
[ 12:07 az ] Original commit 
338751 biology/p5-Bio-Das/Makefile
338751 biology/p5-Bio-Das/pkg-plist
338751 biology/p5-Bio-Glite/Makefile
338751 biology/p5-Bio-Glite/pkg-plist
338751 biology/p5-Bio-Phylo/Makefile
338751 biology/p5-Bio-Phylo/pkg-plist
338751 devel/p5-Algorithm-SVM/Makefile
338751 devel/p5-Algorithm-SVM/pkg-plist
338751 devel/p5-VCP-Source-cvsbk/Makefile
338751 devel/p5-VCP-Source-cvsbk/pkg-plist

(Only the first 10 of 22 ports in this commit are shown above. View all ports for this commit)
- support stage
Fri, 20 Sep 2013
[ 15:55 bapt ] Original commit 
327709 biology/ariadne/Makefile
327709 biology/artemis/Makefile
327709 biology/avida/Makefile
327709 biology/babel/Makefile
327709 biology/biococoa/Makefile
327709 biology/biojava/Makefile
327709 biology/blast/Makefile
327709 biology/blat/Makefile
327709 biology/boinc-simap/Makefile
327709 biology/chemeq/Makefile

(Only the first 10 of 94 ports in this commit are shown above. View all ports for this commit)
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Fri, 2 Aug 2013
[ 18:52 mat ] Original commit 
324174 archivers/p5-Archive-Any/Makefile
324174 archivers/p5-Archive-Extract/Makefile
324174 archivers/p5-Archive-Rar/Makefile
324174 archivers/p5-Archive-SimpleExtractor/Makefile
324174 archivers/p5-Archive-Zip/Makefile
324174 archivers/p5-Compress-LZF/Makefile
324174 archivers/p5-Compress-LZO/Makefile
324174 archivers/p5-Compress-LZW/Makefile
324174 archivers/p5-Mac-Macbinary/Makefile
324174 archivers/p5-POE-Filter-Bzip2/Makefile

(Only the first 10 of 1871 ports in this commit are shown above. View all ports for this commit)
- Convert to new perl framework
- Trim Makefile header
- Remove MAKE_JOBS_SAFE=yes, it's the default.
Fri, 29 Mar 2013
[ 00:44 eadler ] Original commit 
315509 astro/p5-Astro-ADS/Makefile
315509 astro/p5-Astro-Catalog/Makefile
315509 astro/p5-Astro-DSS/Makefile
315509 astro/p5-Astro-SIMBAD-Client/Makefile
315509 astro/p5-Astro-SIMBAD/Makefile
315509 astro/p5-Astro/Makefile
315509 astro/p5-Geo-METAR/Makefile
315509 audio/p5-CDDB/Makefile
315509 audio/p5-CDDB_get/Makefile
315509 audio/p5-Test-Corpus-Audio-MPD/Makefile

(Only the first 10 of 303 ports in this commit are shown above. View all ports for this commit)
For perl@ owned ports:

- Fix COMMENT
- Trim header
Tue, 30 Oct 2012
[ 02:03 wen ] Original commit 
306655 astro/p5-GPS-Babel/Makefile
306655 biology/p5-Bio-Glite/Makefile
306655 databases/p5-DBD-Google/Makefile
306655 devel/p5-Algorithm-Dependency/Makefile
- Reset maintainer to perl@

Feature safe:	yes
[ 01:47 wen ] Original commit 
306652 astro/p5-GPS-Babel/Makefile
306652 biology/p5-Bio-Glite/Makefile
306652 databases/p5-DBD-Google/Makefile
306652 devel/p5-Algorithm-Dependency/Makefile
- Trim Makefile headers
- Reset maintainer to perl@

Feature safe:	yes
Sat, 21 Jan 2012
[ 17:40 eadler ] Original commit 
1.13 astro/p5-Astro-Catalog/Makefile
1.11 astro/p5-Astro-SunTime/Makefile
1.7 astro/py-RO/Makefile
1.10 astro/py-aipy/Makefile
1.3 astro/py-pyfits/Makefile
1.8 audio/calf/Makefile
1.30 audio/gnupod/Makefile
1.3 audio/jack_mixer/Makefile
1.61 audio/muine/Makefile
1.8 audio/p5-Audio-Scrobbler/Makefile

(Only the first 10 of 1326 ports in this commit are shown above. View all ports for this commit)
At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450
ports use BUILD_DEPENDS:= ${RUN_DEPENDS}. This patch fixes ports that are
currently broken. This is a temporary measure until we organically stop using
:= or someone(s) spend a lot of time changing all the ports over.

Explicit duplication > := > = and this just moves ports one step to the left

Approved by:    portmgr
Fri, 29 Jan 2010
[ 14:52 kuriyama ] Original commit 
1.2 astro/p5-Astro-SIMBAD-Client/Makefile
1.27 audio/gnupod/Makefile
1.5 audio/p5-Audio-Scrobbler/Makefile
1.7 audio/p5-Net-DAAP-Client/Makefile
1.8 audio/p5-Net-FreeDB/Makefile
1.17 audio/p5-Xmms/Makefile
1.66 audio/squeezeboxserver/Makefile
1.26 biology/p5-AcePerl/Makefile
1.2 biology/p5-Bio-Glite/Makefile
1.14 biology/p5-Bio-Graphics/Makefile

(Only the first 10 of 11 ports in this commit are shown above. View all ports for this commit)
- Remove unneeded dependencies which is in perl-5.8.9 dist
  (part 19; last!).

Approved by:    portmgr (itetcu)
Thu, 2 Apr 2009
[ 18:24 miwi ] Original commit 
1.105 biology/Makefile
1.1 biology/p5-Bio-Glite/Makefile
1.1 biology/p5-Bio-Glite/distinfo
1.1 biology/p5-Bio-Glite/pkg-descr
1.1 biology/p5-Bio-Glite/pkg-plist
Bio::Glite is an interface to G-language Genome Analysis Environment
through its REST web service (http://www.g-language.org). This module
allows almost everything G-language GAE can do, without installing
all necessary tookits and modules.

Advantage of this module over the standard installation of
G-language GAE package is:
   1. Easy installation from CPAN
   2. Extremely light-weight (less than 1000 lines of code)
   3. Does not require much CPU/RAM (all calculation is done on
the cloud)

Disadvantages includes:
   1. Slower analysis speed
   2. Internet connection is required
   3. No other software interfaces such as the G-language Shell

WWW: http://search.cpan.org/dist/Bio-Glite/

PR:             ports/133273
Submitted by:   Wen Heping <wenheping at gmail.com>

Number of commits found: 11

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