FreshPorts -- The Place For Ports If you buy from Amazon USA, please support us by using this link.
Follow us
Blog
Twitter

I am looking for an LTO tape library. Do you have one to spare?
Port details
p5-Bio-Graphics Generate GD Images of Bio::Seq Objects
2.39 biology on this many watch lists=1 search for ports that depend on this port Find issues related to this port Report an issue related to this port
Maintainer: perl@FreeBSD.org search for ports maintained by this maintainer
Port Added: 10 Mar 2009 18:52:27
Also Listed In: perl5
License: ART10 GPLv1
p5-Bio-Graphics is a simple GD-based renderer (diagram drawer)
for DNA and protein sequences.

WWW: http://search.cpan.org/dist/Bio-Graphics/
SVNWeb : Homepage : Distfiles Availability : PortsMon

NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Build dependencies:
  1. p5-Bio-SCF>=1.01 : biology/p5-Bio-SCF
  2. p5-GD>=2.30 : graphics/p5-GD
  3. p5-GD-SVG>=0.32 : graphics/p5-GD-SVG
  4. p5-Statistics-Descriptive>=2.6 : math/p5-Statistics-Descriptive
  5. p5-bioperl>=1.6.0 : biology/p5-bioperl
  6. p5-Module-Build>=0.4206 : devel/p5-Module-Build
  7. /usr/local/bin/perl5.18.4 : lang/perl5.18
Runtime dependencies:
  1. p5-Bio-SCF>=1.01 : biology/p5-Bio-SCF
  2. p5-GD>=2.30 : graphics/p5-GD
  3. p5-GD-SVG>=0.32 : graphics/p5-GD-SVG
  4. p5-Statistics-Descriptive>=2.6 : math/p5-Statistics-Descriptive
  5. p5-bioperl>=1.6.0 : biology/p5-bioperl
  6. /usr/local/bin/perl5.18.4 : lang/perl5.18
There are no ports dependent upon this port

To install the port: cd /usr/ports/biology/p5-Bio-Graphics/ && make install clean
To add the package: pkg install biology/p5-Bio-Graphics


Configuration Options
     No options to configure

Master Sites:
  1. ftp://ftp.auckland.ac.nz/pub/perl/CPAN/modules/by-module/Bio/
  2. ftp://ftp.cpan.org/pub/CPAN/modules/by-module/Bio/
  3. ftp://ftp.cpan.org/pub/CPAN/modules/by-module/Bio/
  4. ftp://ftp.funet.fi/pub/languages/perl/CPAN/modules/by-module/Bio/
  5. ftp://ftp.kddlabs.co.jp/lang/perl/CPAN/modules/by-module/Bio/
  6. ftp://ftp.mirrorservice.org/sites/cpan.perl.org/CPAN/modules/by-module/Bio/
  7. ftp://ftp.sunet.se/pub/lang/perl/CPAN/modules/by-module/Bio/
  8. http://backpan.perl.org/modules/by-module/Bio/
  9. http://cpan.metacpan.org/modules/by-module/Bio/
  10. http://distcache.FreeBSD.org/ports-distfiles/
  11. http://ftp.jaist.ac.jp/pub/CPAN/modules/by-module/Bio/
  12. http://ftp.twaren.net/Unix/Lang/CPAN/modules/by-module/Bio/
  13. http://www.cpan.dk/modules/by-module/Bio/
  14. http://www.cpan.dk/modules/by-module/Bio/
  15. http://www.cpan.org/modules/by-module/Bio/

Number of commits found: 51

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
07 Dec 2014 07:44:06
Original commit files touched by this commit  2.39
Revision:374175
wen search for other commits by this committer
- Update to 2.39
Changes: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.39/Changes
26 Nov 2014 13:08:38
Original commit files touched by this commit  2.38_1
Revision:373448
mat search for other commits by this committer
Change the way Perl modules are installed, update the default Perl to 5.18.

Before, we had:

  site_perl :           lib/perl5/site_perl/5.18
  site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
  perl_man3 :           lib/perl5/5.18/man/man3

Now we have:

  site_perl : lib/perl5/site_perl
  site_arch : lib/perl5/site_perl/mach/5.18
  perl_man3 : lib/perl5/site_perl/man/man3

Modules without any .so will be installed at the same place regardless of the
(Only the first 15 lines of the commit message are shown above View all of this commit message)
20 Oct 2014 07:10:48
Original commit files touched by this commit  2.38
Revision:371237
bapt search for other commits by this committer
Cleanup plist
25 Jul 2014 23:08:59
Original commit files touched by this commit  2.38
Revision:362941
mat search for other commits by this committer
Really fix.

Sponsored by:	Absolight
25 Jul 2014 15:06:46
Original commit files touched by this commit  2.38
Revision:362915
mat search for other commits by this committer
Fix build.

Sponsored by:	Absolight
24 Jul 2014 09:48:04
Original commit files touched by this commit  2.38
Revision:362773
pi search for other commits by this committer
biology/p5-Bio-Graphics: 2.37 -> 2.38
07 Jun 2014 01:54:42
Original commit files touched by this commit  2.37
Revision:356870
vanilla search for other commits by this committer
Stagify, remove BROKEN.
09 Apr 2014 09:49:03
Original commit files touched by this commit  2.37
Revision:350675
bapt search for other commits by this committer
Mark as broken unstaged perl ports

With hat:	portmgr
20 Sep 2013 15:55:44
Original commit files touched by this commit  2.37
Revision:327709
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
02 Aug 2013 18:52:11
Original commit files touched by this commit  2.37
Revision:324174
mat search for other commits by this committer
- Convert to new perl framework
- Trim Makefile header
- Remove MAKE_JOBS_SAFE=yes, it's the default.
20 Jul 2013 10:03:10
Original commit files touched by this commit  2.37
Revision:323339
wen search for other commits by this committer
- Update to 2.37
Changes: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.37/Changes
03 Mar 2013 15:22:43
Original commit files touched by this commit  2.33
Revision:313360
eadler search for other commits by this committer
Add missing item to pkg-plist reported by QAT but not reported by poudriere.
03 Mar 2013 01:45:01
Original commit files touched by this commit  2.33
Revision:313319
eadler search for other commits by this committer
Update to 2.33
24 Jan 2013 14:36:56
Original commit files touched by this commit  2.32
Revision:310932
jadawin search for other commits by this committer
- Update to 2.32
- Changelog: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.32/Changes
07 Dec 2012 13:49:15
Original commit files touched by this commit  2.31
Revision:308423
tobez search for other commits by this committer
Update to 2.31.

Changes: http://search.cpan.org/dist/Bio-Graphics/Changes

Feature safe:	yes
18 Jun 2012 09:30:35
Original commit files touched by this commit  2.29
sunpoet search for other commits by this committer
- Update to 2.29

Changes:        http://search.cpan.org/dist/Bio-Graphics/Changes
01 Jun 2012 05:26:28
Original commit files touched by this commit  2.28_1
dinoex search for other commits by this committer
- update png to 1.5.10
17 Apr 2012 13:03:00
Original commit files touched by this commit  2.28
wen search for other commits by this committer
- Update to 2.28
ChangeLog: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.28/Changes
11 Feb 2012 02:04:24
Original commit files touched by this commit  2.26
sunpoet search for other commits by this committer
- Update to 2.26

Changes:        http://search.cpan.org/dist/Bio-Graphics/Changes
07 Oct 2011 11:22:46
Original commit files touched by this commit  2.25
culot search for other commits by this committer
- Fix LICENSE (Artistic 1 instead of Artistic 2)
- Pet portlint(1)

PR:             ports/161336
Submitted by:   Simon Olofsson <simon@olofsson.de>
02 Oct 2011 17:03:33
Original commit files touched by this commit  2.25
sunpoet search for other commits by this committer
- Update to 2.25
- Sort MAN3 and PLIST
- Pet portlint

Changes:        http://search.cpan.org/dist/Bio-Graphics/Changes
01 Jun 2011 20:21:51
Original commit files touched by this commit  2.24
bapt search for other commits by this committer
- update to 2.24
- add licenses
- changes: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.24/Changes
23 Dec 2010 06:37:08
Original commit files touched by this commit  2.18
wen search for other commits by this committer
- Update to 2.18
ChangeLog: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.18/Changes
24 Nov 2010 06:19:46
Original commit files touched by this commit  2.15
pgollucci search for other commits by this committer
- Also remove them from pkg-plist lists not from me that crept in
16 Nov 2010 08:07:27
Original commit files touched by this commit  2.15
wen search for other commits by this committer
- Update to 2.15
Changelog: http://search.cpan.org/src/LDS/Bio-Graphics-2.15/Changes

PR:             ports/152189
Submitted by:   Gea-Suan Lin <gslin@gslin.org>
19 Oct 2010 10:42:43
Original commit files touched by this commit  2.14
wen search for other commits by this committer
- Update to 2.14
ChangeLog: http://search.cpan.org/src/LDS/Bio-Graphics-2.14/Changes
26 Sep 2010 08:32:26
Original commit files touched by this commit  2.13
wen search for other commits by this committer
- Update to 2.13
30 Jun 2010 07:41:07
Original commit files touched by this commit  2.11
wen search for other commits by this committer
- Update to 2.11

Feature safe:   yes
18 May 2010 08:27:03
Original commit files touched by this commit  2.09
wen search for other commits by this committer
- Update to 2.09
14 May 2010 13:05:15
Original commit files touched by this commit  2.08
wen search for other commits by this committer
- Update to 2.0.8
10 May 2010 02:36:58
Original commit files touched by this commit  2.07
wen search for other commits by this committer
- Update to 2.0.7
- Set maintainer to perl@
20 Apr 2010 08:48:47
Original commit files touched by this commit  2.04
wen search for other commits by this committer
- Update to 2.04
30 Mar 2010 01:22:56
Original commit files touched by this commit  2.02
wen search for other commits by this committer
- Update to 2.02
28 Mar 2010 06:47:48
Original commit files touched by this commit  2.01_1
dinoex search for other commits by this committer
- update to 1.4.1
Reviewed by:    exp8 run on pointyhat
Supported by:   miwi
10 Mar 2010 01:35:57
Original commit files touched by this commit  2.01
wen search for other commits by this committer
- Update to 2.01
10 Feb 2010 06:10:33
Original commit files touched by this commit  2.00
wen search for other commits by this committer
- Update to 2.00
05 Feb 2010 11:46:55
Original commit files touched by this commit  1.995_3
dinoex search for other commits by this committer
- update to jpeg-8
29 Jan 2010 14:52:21
Original commit files touched by this commit  1.995_2
kuriyama search for other commits by this committer
- Remove unneeded dependencies which is in perl-5.8.9 dist
  (part 19; last!).

Approved by:    portmgr (itetcu)
07 Jan 2010 02:27:20
Original commit files touched by this commit  1.995
wen search for other commits by this committer
- Update to 1.995
11 Dec 2009 08:02:53
Original commit files touched by this commit  1.994
wen search for other commits by this committer
- Update to 1.994
04 Dec 2009 11:53:48
Original commit files touched by this commit  1.993
wen search for other commits by this committer
- Update to 1.993
20 Nov 2009 05:10:17
Original commit files touched by this commit  1.992
wen search for other commits by this committer
- Update to 1.992
- Update my mail address to FreeBSD
28 Aug 2009 23:36:45
Original commit files touched by this commit  1.982
miwi search for other commits by this committer
- Update to 0.982

PR:             138264
Submitted by:   Wen Heping <wenheping@gmail.com> (maintainer)
31 Jul 2009 13:57:52
Original commit files touched by this commit  1.97_1
dinoex search for other commits by this committer
- bump all port that indirectly depends on libjpeg and have not yet been bumped
or updated
Requested by:   edwin
05 Jul 2009 22:24:00
Original commit files touched by this commit  1.97
miwi search for other commits by this committer
- Update to 1.97

PR:             136310
Submitted by:   Wen Heping <wenheping@gmail.com> (maintainer)
02 Jun 2009 21:34:06
Original commit files touched by this commit  1.95
miwi search for other commits by this committer
- Update to 1.95

PR:             135141
Submitted by:   Wen Heping <wenheping@gmail.com> (maintainer)
01 May 2009 14:54:31
Original commit files touched by this commit  1.94
miwi search for other commits by this committer
- Update to 1.94

Approved by:    maintainer implicit
04 Apr 2009 17:45:12
Original commit files touched by this commit  1.93
miwi search for other commits by this committer
- Update to 1.93

PR:             133342
Submitted by:   Wen Heping <wenheping@gmail.com> (maintainer)
25 Mar 2009 17:38:35
Original commit files touched by this commit  1.91
miwi search for other commits by this committer
- Update to 1.91

PR:             133065
Submitted by:   Wen Heping <wenheping@gmail.com> (maintainer)
19 Mar 2009 16:34:47
Original commit files touched by this commit  1.90
miwi search for other commits by this committer
- Update to 1.90

PR:             132659
Submitted by:   Wen heping <wenheping@gmail.com> (maintainer)
10 Mar 2009 18:50:49
Original commit files touched by this commit  1.84
miwi search for other commits by this committer
p5-Bio-Graphics is a simple GD-based renderer (diagram drawer)
for DNA and protein sequences.

WWW: http://search.cpan.org/dist/Bio-Graphics/

PR:             ports/132088
Submitted by:   Wen Heping <wenheping at gmail.com>

Number of commits found: 51

Login
User Login
Create account

Servers and bandwidth provided by
New York Internet, SuperNews, and RootBSD

This site
What is FreshPorts?
About the authors
FAQ
How big is it?
The latest upgrade!
Privacy
Forums
Blog
Contact

Search
Enter Keywords:
 
more...

Latest Vulnerabilities
muttDec 23
muttDec 23
ntpDec 20
ntp-develDec 20
gitDec 19
otrsDec 16
mod_dav_svnDec 15
subversionDec 15
subversion16Dec 15
subversion17Dec 15
nvidia-driverDec 14
nvidia-driver-173Dec 14
nvidia-driver-304Dec 14
asterisk11Dec 11
bind99Dec 11

10 vulnerabilities affecting 28 ports have been reported in the past 14 days

* - modified, not new

All vulnerabilities


Ports
Home
Categories
Deleted ports
Sanity Test Failures
Newsfeeds

Statistics
Graphs
NEW Graphs (Javascript)
Traffic

Calculated hourly:
Port count 24439
Broken 148
Deprecated 75
Ignore 399
Forbidden 2
Restricted 207
No CDROM 93
Vulnerable 20
Expired 0
Set to expire 70
Interactive 0
new 24 hours 6
new 48 hours7
new 7 days21
new fortnight43
new month99

Servers and bandwidth provided by
New York Internet, SuperNews, and RootBSD
Valid HTML, CSS, and RSS.
Copyright © 2000-2014 Dan Langille. All rights reserved.