FreshPorts -- The Place For Ports If you buy from Amazon USA, please support us by using this link.
Follow us
Blog
Twitter

non port: head/biology/plinkseq/Makefile
SVNWeb

Number of commits found: 12

Fri, 11 Nov 2016
[ 09:31 linimon ] Original commit   Revision:425879
425879 benchmarks/libmicro/Makefile
425879 benchmarks/nosqlbench/Makefile
425879 biology/jellyfish/Makefile
425879 biology/muscle/Makefile
425879 biology/p5-AcePerl/Makefile
425879 biology/plinkseq/Makefile
425879 science/gchemutils/Makefile
425879 science/simlib/Makefile
Mark various leaf ports broken on aarch64, and, where appropriate, other
tier-2 archs.

Approved by:	portmgr (tier-2 blanket)
Thu, 21 Apr 2016
[ 16:43 swills ] Original commit   Revision:413746
413746 archivers/innoextract/Makefile
413746 archivers/pecl-phk/Makefile
413746 archivers/php55-phar/Makefile
413746 archivers/php56-phar/Makefile
413746 audio/xmms-volnorm/Makefile
413746 benchmarks/smhasher/Makefile
413746 biology/plinkseq/Makefile
413746 chinese/wordpress-zh_CN/Makefile
413746 chinese/wordpress-zh_TW/Makefile
413746 comms/atslog/Makefile

(Only the first 10 of 419 ports in this commit are shown above. View all ports for this commit)
many ports: mark broken on powerpc64
Fri, 11 Dec 2015
[ 08:48 miwi ] Original commit   Revision:403506
403506 audio/praat/Makefile
403506 biology/bwa/Makefile
403506 biology/cd-hit/Makefile
403506 biology/cdbfasta/Makefile
403506 biology/fastool/Makefile
403506 biology/fasttree/Makefile
403506 biology/fastx-toolkit/Makefile
403506 biology/gmap/Makefile
403506 biology/hmmer/Makefile
403506 biology/libgtextutils/Makefile

(Only the first 10 of 54 ports in this commit are shown above. View all ports for this commit)
- Update maintainer mail address
- Update/Remove MASTER_SITE

PR:		204755
Submitted by:	 jwbacon@tds.net (maintainer)
Approved by:	mat (mentor)
Differential Revision:	D4493
Sun, 12 Oct 2014
[ 03:16 wen ] Original commit   Revision:370680
370680 biology/plinkseq/Makefile
370680 biology/plinkseq/distinfo
370680 biology/plinkseq/files
370680 biology/plinkseq/pkg-plist
- Update to 0.10

PR:		194309
Submitted by:	jwbacon@tds.net(maintainer)
Sat, 4 Oct 2014
[ 15:12 sunpoet ] Original commit   Revision:369969
369969 astro/libosmpbf/Makefile
369969 astro/osmium/Makefile
369969 audio/clementine-player/Makefile
369969 audio/mixxx/Makefile
369969 audio/mumble/Makefile
369969 audio/murmur/Makefile
369969 biology/plinkseq/Makefile
369969 devel/php5-pinba/Makefile
369969 devel/pinba_engine/Makefile
369969 devel/protobuf-c/Makefile

(Only the first 10 of 23 ports in this commit are shown above. View all ports for this commit)
- Update to 2.6.0
- Update MASTER_SITES
- Add my LOCAL to MASTER_SITES
- Use USE_CSTD
- Use MAKE_CMD
- Reformat pkg-descr
- Update WWW
- Take maintainership
- Bump PORTREVISION for devel/protobuf shlib change

Changes:	https://code.google.com/p/protobuf/source/browse/trunk/CHANGES.txt
Tue, 22 Jul 2014
[ 22:12 amdmi3 ] Original commit   Revision:362596
362596 biology/plinkseq/Makefile
362596 biology/plinkseq/pkg-plist
- Switch to USES=libtool, drop .la files
- Fix shebangs

Approved by:	portmgr blanket
Fri, 7 Mar 2014
[ 11:37 bapt ] Original commit   Revision:347367
347367 biology/plinkseq/Makefile
Convert to dos2unix
Fri, 31 Jan 2014
[ 12:33 miwi ] Original commit   Revision:341988
341988 biology/plinkseq/Makefile
- Stage support
Wed, 11 Dec 2013
[ 14:43 bapt ] Original commit   Revision:336171
336171 biology/crux/Makefile
336171 biology/embassy/Makefile
336171 biology/emboss/Makefile
336171 biology/iolib/Makefile
336171 biology/libsbml/Makefile
336171 biology/mopac/Makefile
336171 biology/ortep3/Makefile
336171 biology/plink/Makefile
336171 biology/plinkseq/Makefile
336171 biology/protomol/Makefile

(Only the first 10 of 12 ports in this commit are shown above. View all ports for this commit)
In preparation for making libtool generate libraries with a sane name, fix all
LIB_DEPENDS in biology
Fri, 20 Sep 2013
[ 15:55 bapt ] Original commit   Revision:327709
327709 biology/ariadne/Makefile
327709 biology/artemis/Makefile
327709 biology/avida/Makefile
327709 biology/babel/Makefile
327709 biology/biococoa/Makefile
327709 biology/biojava/Makefile
327709 biology/blast/Makefile
327709 biology/blat/Makefile
327709 biology/boinc-simap/Makefile
327709 biology/chemeq/Makefile

(Only the first 10 of 94 ports in this commit are shown above. View all ports for this commit)
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Mon, 18 Mar 2013
[ 15:14 vanilla ] Original commit   Revision:314580
314580 UPDATING
314580 audio/clementine-player/Makefile
314580 audio/mumble/Makefile
314580 audio/murmur/Makefile
314580 audio/umurmur/Makefile
314580 biology/plinkseq/Makefile
314580 converters/osm2pgsql/Makefile
314580 devel/gjstest/Makefile
314580 devel/php5-pinba/Makefile
314580 devel/pinba_engine/Makefile

(Only the first 10 of 22 ports in this commit are shown above. View all ports for this commit)
1: Upgrade protobuf to 2.5.0.
2: bump revision.
3: document UPDATING.
Thu, 27 Sep 2012
[ 09:59 makc ] Original commit   Revision:304954
304954 biology/Makefile
304954 biology/plink
304954 biology/plink/Makefile
304954 biology/plink/distinfo
304954 biology/plink/files
304954 biology/plink/files/patch-Makefile
304954 biology/plink/pkg-descr
304954 biology/plinkseq
304954 biology/plinkseq/Makefile
304954 biology/plinkseq/distinfo

(Only the first 10 of 12 ports in this commit are shown above. View all ports for this commit)
Add new ports biology/plink [1] and biology/plinkseq [2]:

PLINK is a free, open-source whole genome association analysis toolset.
PLINK/SEQ is an open-source C/C++ library for working with human
genetic variation data.

PR:		ports/171918 [1]
PR:		ports/171922 [2]
Submitted by:	Jason Bacon <jwbacon at tds.net>

Number of commits found: 12

Login
User Login
Create account

Servers and bandwidth provided by
New York Internet, SuperNews, and RootBSD

This site
What is FreshPorts?
About the authors
Issues
FAQ
How big is it?
The latest upgrade!
Privacy
Forums
Blog
Contact

Search
Enter Keywords:
 
more...

Latest Vulnerabilities
curlFeb 22
linux-c6-openssl*Feb 22
linux-c6-openssl*Feb 22
linux-c7-openssl*Feb 22
linux-c7-openssl*Feb 22
openssl*Feb 22
openssl*Feb 22
openssl-devel*Feb 22
openssl-devel*Feb 22
xen-toolsFeb 22
fbsdmonFeb 21
libevent*Feb 20
wavpackFeb 18
openssl-develFeb 16
optipngFeb 16

13 vulnerabilities affecting 24 ports have been reported in the past 14 days

* - modified, not new

All vulnerabilities


Ports
Home
Categories
Deleted ports
Sanity Test Failures
Newsfeeds

Statistics
Graphs
NEW Graphs (Javascript)
Traffic

Calculated hourly:
Port count 28204
Broken 281
Deprecated 109
Ignore 547
Forbidden 1
Restricted 205
No CDROM 83
Vulnerable 86
Expired 13
Set to expire 99
Interactive 0
new 24 hours 11
new 48 hours16
new 7 days208
new fortnight256
new month476

Servers and bandwidth provided by
New York Internet, SuperNews, and RootBSD
Valid HTML, CSS, and RSS.
Copyright © 2000-2014 Dan Langille. All rights reserved.