| non port: biology/py-bx-python/distinfo |
Number of commits found: 12 |
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Monday, 12 Feb 2024
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23:07 Yuri Victorovich (yuri) 
biology/py-bx-python: update 0.10.0 → 0.11.0
Reported by: portscout
    3fad843 |
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Sunday, 28 Jan 2024
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22:08 Ruslan Makhmatkhanov (rm)
biology/py-bx-python: update to 0.10.0
Update to 0.10.0. This release adds support for python 3.11
Changes: https://github.com/bxlab/bx-python/releases/tag/v0.10.0
PR: 276683
PR: 275494
Approved by: yuri (maintainer)
3dae35c |
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Tuesday, 21 Dec 2021
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09:03 Yuri Victorovich (yuri)
biology/py-bx-python: Update 0.8.11-6 -> 0.8.13
Reported by: portscout
7697bf3 |
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Tuesday, 17 Aug 2021
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19:10 Yuri Victorovich (yuri)
biology/py-bx-python: Update 0.8.10 -> 0.8.11-6
640855add |
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Saturday, 27 Feb 2021
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03:55 yuri
biology/py-bx-python: Update 0.8.9 -> 0.8.10
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Friday, 26 Jun 2020
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04:17 yuri
biology/py-bx-python: Update 0.8.8 -> 0.8.9
Reported by: portscout
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Saturday, 15 Feb 2020
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20:08 yuri
biology/py-bx-python: Update 0.8.6 -> 0.8.8
Reported by: portscout
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Saturday, 23 Nov 2019
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05:53 yuri
biology/py-bx-python: Update 0.8.4 -> 0.8.6
Reported by: portscout
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Wednesday, 19 Jun 2019
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08:08 yuri
biology/py-bx-python: Update 0.8.2 -> 0.8.4
Reported by: pirtscout
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Sunday, 26 Aug 2018
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09:50 yuri
biology/py-bx-python: Update 0.8.1 -> 0.8.2
Reported by: portscout
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Saturday, 10 Feb 2018
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00:09 yuri
biology/py-bx-python: Update to 0.8.1
Additional port changes:
* Changed to DISTVERSION.
* Added USE_PYTHON=cython.
* Added stripping.
* Updated maintainer e-mail.
Reported compiler warnings to the upstream.
Reported by: portscout
Approved by: tcberner (mentor)
Differential Revision: https://reviews.freebsd.org/D14283
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Saturday, 6 May 2017
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06:07 miwi
bx-python is a python library and associated set of scripts to allow for rapid
implementation of genome scale analyses. The library contains a variety of
useful modules, but the particular strengths are:
Classes for reading and working with genome-scale multiple local alignments
(in MAF, AXT, and LAV formats). Generic data structure for indexing on disk
files that contain blocks of data associated with intervals on various
sequences (used, for example, to provide random access to individual
alignments in huge files; optomized for use over network filesystems).
Data structures for working with intervals on sequences:
* "Binned bitsets" which act just like chromosome sized bit arrays,
but lazily allocate regions and allow large blocks of all set or
all unset bits to be stored compactly
* "Intersecter" for performing fast intersection tests that preserve
both query and target intervals and associated annotation
WWW: https://github.com/bxlab/bx-python
PR: 218757
Submitted by: Yuri Victorovich <yuri@rawbw.com>
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Number of commits found: 12 |
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