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Port details
seaview 4.5.2_1,1 biology on this many watch lists=0 search for ports that depend on this port
Multiple DNA/protein sequence alignment editor
Maintained by: 5u623l20@gmail.com search for ports maintained by this maintainer
Port Added: unknown
License: not specified in port


SeaView is a multiple sequence alignment editor.

You can align DNA/protein sequences from several organisms, and find
out their relative postions in phylogenic tree.

Once SeaView is installed, you can open the on-line help window through
the 'Help' button to learn how to use SeaView.

Example mase files can be found at:

	ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/

WWW: http://doua.prabi.fr/software/seaview
SVNWeb : Main Web Site : Distfiles Availability : PortsMon

NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Required To Build:
  1. devel/gmake
  2. x11/libXext
  3. x11-fonts/libXft
  4. x11/libXinerama
Required To Run:
  1. x11/libXext
  2. x11-fonts/libXft
  3. x11/libXinerama
Required Libraries:
  1. x11-toolkits/fltk
  2. print/pdflib
There are no ports dependent upon this port

To install the port: cd /usr/ports/biology/seaview/ && make install clean
To add the package: pkg install biology/seaview


Configuration Options
===> The following configuration options are available for seaview-4.5.2_1,1:
     PDFLIB=on: PDFlib support
===> Use 'make config' to modify these settings

Master Sites:
  1. ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/
  2. http://distcache.FreeBSD.org/ports-distfiles/
  3. http://doua.prabi.fr/software/seaview_data/

Number of commits found: 48

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
10 Sep 2014 20:50:37
Original commit files touched by this commit  4.5.2_1,1
Revision:367888
gerald search for other commits by this committer
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
04 Jun 2014 06:28:56
Original commit files touched by this commit  4.5.2,1
Revision:356437
miwi search for other commits by this committer
- Update to 4.5.2
- Pass maintainership to submitter

PR:		190564
21 May 2014 05:40:54
Original commit files touched by this commit  4.5.1,1
Revision:354710
miwi search for other commits by this committer
- Update to 4.5.1

PR:		187975
Submitted by:	Ports Fury
27 Feb 2014 08:46:42
Original commit files touched by this commit  4.4.3,1
Revision:346262
miwi search for other commits by this committer
- Stage support
- Update to version 4.4.3

PR:		187041
Submitted by:	ports fury
11 Dec 2013 14:43:51
Original commit files touched by this commit  4.4.2,1
Revision:336171
bapt search for other commits by this committer
In preparation for making libtool generate libraries with a sane name, fix all
LIB_DEPENDS in biology
20 Sep 2013 15:55:44
Original commit files touched by this commit  4.4.2,1
Revision:327709
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
14 Aug 2013 22:35:54
Refresh Original commit files touched by this commit
Revision:324744  Sanity Test Failure
ak search for other commits by this committer
- Remove MAKE_JOBS_SAFE variable

Approved by:	portmgr (bdrewery)
15 Jul 2013 14:49:03
Original commit files touched by this commit  4.4.2,1
Revision:323044
miwi search for other commits by this committer
- Update to 4.4.2

PR:		180515
Submitted by:	Ports Fury
26 Mar 2013 01:08:40
Original commit files touched by this commit  4.4.1,1
Revision:315253
miwi search for other commits by this committer
- Update to 4.4.1

PR:		177257
Submitted by:	Ports Fury
23 Jan 2013 15:00:19
Original commit files touched by this commit  4.4.0_1,1
Revision:310871
makc search for other commits by this committer
Bump PORTREVISION after DESKTOP_ENTRIES update
07 Jan 2013 02:07:27
Original commit files touched by this commit  4.4.0,1
Revision:310020
makc search for other commits by this committer
- Update DESKTOP_ENTRIES:
  * rephrase Comment field or use port ${COMMENT} if appropriate
  * adjust Icon field according to the Desktop Entry Specification
  * update Categories field: remove deprecated category Application;
    set main category, if missing
- Remove indefinite article and/or rephrase COMMENT
- Trim Makefile header
- Other minor changes
30 Oct 2012 20:31:14
Original commit files touched by this commit  4.4.0,1
Revision:306709
pawel search for other commits by this committer
- Update to version 4.4.0
- Mark MAKE_JOBS_SAFE
- Make dependency on print/pdflib optional
- Switch to PLIST_FILES

While here:
- Add missing deps
- Add desktop entry

PR:		ports/172498
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
Feature safe:	yes
01 Oct 2012 14:45:17
Original commit files touched by this commit  2006.02.13_9
Revision:305130
tabthorpe search for other commits by this committer
- Reassign to the heap at maintainer's request
01 Jun 2012 05:26:28
Original commit files touched by this commit  2006.02.13_9
dinoex search for other commits by this committer
- update png to 1.5.10
10 Jan 2012 11:41:37
Original commit files touched by this commit  2006.02.13_8
ale search for other commits by this committer
Chase pdflib.so version and bump PORTREVISION accordingly.
17 Nov 2011 13:22:29
Original commit files touched by this commit  2006.02.13_7
gahr search for other commits by this committer
- unbreak

Feature safe:   yes
04 Nov 2011 22:14:54
Original commit files touched by this commit  2006.02.13_7
pav search for other commits by this committer
- Mark BROKEN: does not compile with new fltk

Reported by:    pointyhat
19 Mar 2011 12:38:54
Original commit files touched by this commit  2006.02.13_7
miwi search for other commits by this committer
- Get Rid MD5 support
28 Mar 2010 06:47:48
Original commit files touched by this commit  2006.02.13_7
dinoex search for other commits by this committer
- update to 1.4.1
Reviewed by:    exp8 run on pointyhat
Supported by:   miwi
23 Mar 2010 21:14:39
Original commit files touched by this commit  2006.02.13_6
gahr search for other commits by this committer
- Chase x11-toolkits/fltk update
05 Feb 2010 11:46:55
Original commit files touched by this commit  2006.02.13_5
dinoex search for other commits by this committer
- update to jpeg-8
31 Jul 2009 13:57:52
Original commit files touched by this commit  2006.02.13_4
dinoex search for other commits by this committer
- bump all port that indirectly depends on libjpeg and have not yet been bumped
or updated
Requested by:   edwin
19 Apr 2008 17:56:05
Original commit files touched by this commit  2006.02.13_3
  Sanity Test Failure
miwi search for other commits by this committer
- Remove unneeded dependency from gtk12/gtk20 [1]
- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Remove X11BASE support in favor of LOCALBASE or PREFIX
- Use USE_LDCONFIG instead of INSTALLS_SHLIB
- Remove unneeded USE_GCC 3.4+

Thanks to all Helpers:
        Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr,
        ehaupt, nox, itetcu, flz, pav

PR:             116263
Tested on:      pointyhat
Approved by:    portmgr (pav)
23 Mar 2008 16:44:09
Original commit files touched by this commit  2006.02.13_3
miwi search for other commits by this committer
- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Bump PORTREVISION

Approved by:    portmgr (xorg cleanup)
19 May 2007 20:32:57
Original commit files touched by this commit  2006.02.13_2
flz search for other commits by this committer
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
09 Oct 2006 08:18:35
Original commit files touched by this commit  2006.02.13_1
ale search for other commits by this committer
Chase pdf library and bump PORTREVISION.
05 Apr 2006 01:58:03
Original commit files touched by this commit  2006.02.13
mnag search for other commits by this committer
- Update to 2006.02.13

PR:             95281
Submitted by:   maintainer
09 Feb 2006 10:33:47
Original commit files touched by this commit  2006.01.25
lawrance search for other commits by this committer
Update to 2006.01.25.

PR:             ports/93051
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
10 Dec 2005 14:04:33
Original commit files touched by this commit  2006.01.01
tdb search for other commits by this committer
- New upstream version; two patches incorporated.

PR:             90140
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
Approved by:    clement (mentor)
06 Dec 2005 15:13:17
Original commit files touched by this commit  2005.13.07
tdb search for other commits by this committer
- Update to 2005.13.07 to make fetchable again

PR:             89976
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
Approved by:    clement (mentor)
16 Nov 2005 04:36:22
Original commit files touched by this commit  2004.12.16
kris search for other commits by this committer
BROKEN: Size mismatch
18 Dec 2004 15:14:42
Original commit files touched by this commit  2004.12.16
sem search for other commits by this committer
- Update to 2004.12.16

PR:             ports/75205
Submitted by:   maintainer
11 Dec 2004 03:58:19
Original commit files touched by this commit  2004.09.24
sem search for other commits by this committer
Not a real update with the last patch.
The real update here.
11 Dec 2004 03:49:29
Original commit files touched by this commit  2004.03.16
sem search for other commits by this committer
- This update brings seaview to the latest release (dated 09.24.04
in the FTP site).

- While here add a modeline for vi, and fix a tab (cosmetic)

- Make portlint happy.

PR:             ports/74897
Submitted by:   maintainer
18 May 2004 14:59:03
Original commit files touched by this commit  2004.03.16
eik search for other commits by this committer
unbreak, only minor changes in the distfiles (see PR)

Since the distfile has no version number, put it in
DIST_SUBDIR=    ${PORTNAME}-${PORTVERSION}

PR:             66817
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar> (new maintainer)
12 Apr 2004 03:37:14
Original commit files touched by this commit  2003.11.25
kris search for other commits by this committer
BROKEN: Checksum mismatch
29 Jan 2004 10:09:29
Original commit files touched by this commit  2003.11.25
krion search for other commits by this committer
- Update to version 2003.11.25
17 Nov 2003 13:36:41
Original commit files touched by this commit  2003.11.17
krion search for other commits by this committer
- Update to new version 2003.11.17
- Unbreak this port
06 Nov 2003 23:15:06
Original commit files touched by this commit  2003.01.21
anholt search for other commits by this committer
Mark BROKEN: distfile has changed.
22 May 2003 05:59:33
Original commit files touched by this commit  2003.01.21
hoek search for other commits by this committer
Upgrade to 2003.01.21.  Appears to only add some more file export/print
options.  Additional patches were necessary since the fltk port seems
to have been upgraded and thus also broken this port (which would
been already broken due to the checksum failure).
22 May 2003 02:44:05
Original commit files touched by this commit  2002.10.18
hoek search for other commits by this committer
Add back the WWW which was inexplicably deleted in a previous
revision.  Make a few organisational improvements.  However, be
too lazy to move to pkg-message a note that really shouldn't
be necessary for the end user at all.
20 Feb 2003 16:51:35
Original commit files touched by this commit  2002.10.18
knu search for other commits by this committer
De-pkg-comment.
20 Nov 2002 14:03:25
Original commit files touched by this commit  2002.10.18
ijliao search for other commits by this committer
unbroke by upgrade to 20021018
drop maintainership

PR:             45466
Submitted by:   old maintainer
07 Nov 2002 23:13:11
Original commit files touched by this commit  1.0
arved search for other commits by this committer
Update WWW
04 Jul 2002 09:20:30
Original commit files touched by this commit  1.0
mikeh search for other commits by this committer
Bump XForms lib. version.
18 May 2002 02:36:56
Original commit files touched by this commit  1.0
kris search for other commits by this committer
BROKEN: Checksum is incorrect
08 Oct 2000 11:23:49
files touched by this commit
asami search for other commits by this committer
Change PKGDIR from pkg/ to .  Also fix places where ${PKGDIR} is   spelled out
(many of which are ${PKGDIR}/MESSAGE -> ${PKGMESSAGE} type   fixes that
shouldn't have been necessary) and the string "/pkg/"   appear.    
08 Oct 2000 00:23:30
files touched by this commit
asami search for other commits by this committer
Convert category biology to new layout.  

Number of commits found: 48

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