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non port: head/biology/seqan/Makefile
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Number of commits found: 9

Mon, 10 Mar 2014
[ 20:55 gerald ] Original commit 
347809 archivers/hs-tar/Makefile
347809 archivers/hs-zip-archive/Makefile
347809 archivers/hs-zlib-bindings/Makefile
347809 archivers/hs-zlib-conduit/Makefile
347809 archivers/hs-zlib-enum/Makefile
347809 archivers/hs-zlib/Makefile
347809 astro/R-cran-maptools/Makefile
347809 astro/astrometry/Makefile
347809 astro/nightfall/Makefile
347809 astro/py-RO/Makefile

(Only the first 10 of 1081 ports in this commit are shown above. View all ports for this commit)
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
Fri, 7 Mar 2014
[ 15:52 bapt ] Original commit 
347402 benchmarks/netio/Makefile
347402 benchmarks/pybench/Makefile
347402 benchmarks/scimark2/Makefile
347402 benchmarks/scimark2c/Makefile
347402 biology/biojava/Makefile
347402 biology/blat/Makefile
347402 biology/libsbml/Makefile
347402 biology/plink/Makefile
347402 biology/seqan/Makefile
Convert b* to USES=zip
Sat, 26 Oct 2013
[ 00:52 gerald ] Original commit 
331644 archivers/hs-tar/Makefile
331644 archivers/hs-zip-archive/Makefile
331644 archivers/hs-zlib-bindings/Makefile
331644 archivers/hs-zlib-conduit/Makefile
331644 archivers/hs-zlib-enum/Makefile
331644 archivers/hs-zlib/Makefile
331644 astro/R-cran-maptools/Makefile
331644 astro/astrometry/Makefile
331644 astro/nightfall/Makefile
331644 astro/py-RO/Makefile

(Only the first 10 of 1147 ports in this commit are shown above. View all ports for this commit)
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
Fri, 20 Sep 2013
[ 15:55 bapt ] Original commit 
327709 biology/ariadne/Makefile
327709 biology/artemis/Makefile
327709 biology/avida/Makefile
327709 biology/babel/Makefile
327709 biology/biococoa/Makefile
327709 biology/biojava/Makefile
327709 biology/blast/Makefile
327709 biology/blat/Makefile
327709 biology/boinc-simap/Makefile
327709 biology/chemeq/Makefile

(Only the first 10 of 94 ports in this commit are shown above. View all ports for this commit)
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Sat, 17 Aug 2013
[ 16:27 gerald ] Original commit 
324851 archivers/rvm/Makefile
324851 audio/beast/Makefile
324851 audio/py-tagpy/Makefile
324851 biology/seqan/Makefile
324851 cad/calculix/Makefile
324851 cad/gspiceui/Makefile
324851 chinese/ibus-pinyin/Makefile
324851 comms/dabstick-radio/Makefile
324851 comms/efax-gtk/Makefile
324851 comms/ems-flasher/Makefile

(Only the first 10 of 93 ports in this commit are shown above. View all ports for this commit)
Replace USE_GCC=4.6+ and USE_GCC=4.4+ by USE_GCC=yes.

Right now this is a noop in the former case and a noop in the latter
case unless lang/gcc44 has been installed explicitly.

This puts a bit more emphasis on standardizing on a canonical version
"current" GCC and makes it easier to update that canonical version
by changing the default in Mk/bsd.gcc.mk and updating the lang/gcc port.

That is, USE_GCC=yes means "use a decent/modern version of GCC" without
having to worry about details.

Approved by:	portmgr (bdrewery)
Fri, 22 Mar 2013
[ 20:06 makc ] Original commit 
314960 archivers/laszip/Makefile
314960 astro/qlandkartegt/Makefile
314960 astro/stellarium/Makefile
314960 audio/acoustid-fingerprinter/Makefile
314960 audio/aften/Makefile
314960 audio/alure/Makefile
314960 audio/amarok-kde4/Makefile
314960 audio/arss/Makefile
314960 audio/audex/Makefile
314960 audio/ccaudio2/Makefile

(Only the first 10 of 464 ports in this commit are shown above. View all ports for this commit)
- convert USE_CMAKE to USES
- while here clean up some ports from CMAKE_VERBOSE, which is intended
  for users

Approved by:	portmgr (miwi)
Sat, 21 Jul 2012
[ 22:20 gerald ] Original commit 
301291 biology/seqan/Makefile
Replace USE_GCC=4.4+ by USE_GCC=4.6+ since GCC 4.4 is on its way out.

Approved by:	maintainer
Thu, 7 Jun 2012
[ 13:04 amdmi3 ] Original commit 
1.2 biology/seqan/Makefile
- Fix maintainer email

Submitted by:   maintainer via private email
Wed, 6 Jun 2012
[ 17:51 amdmi3 ] Original commit 
1.121 biology/Makefile
1.1 biology/seqan/Makefile
1.1 biology/seqan/distinfo
1.1 biology/seqan/files/patch-cmake-CMakeLists.txt
1.1 biology/seqan/files/patch-cmake-apps-CMakeLists.txt
1.1 biology/seqan/files/pkg-message.in
1.1 biology/seqan/pkg-descr
1.1 biology/seqan/pkg-plist
SeqAn is an open source C++ library of efficient algorithms
and data structures for the analysis of sequences with the
focus on biological data. The library is licensed under the
3-clause BSD license except the applications which are GPL.

WWW: http://www.seqan.de/

PR:             167571
Submitted by:   Hannes <h2+fbsdports@fsfe.org>

Number of commits found: 9

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