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Port details
seqio Set of C functions which can read/write biological sequence files
1.2.2_1 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port

There is no maintainer for this port.
Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org search for ports maintained by this maintainer
Port Added: 22 Aug 2001 09:07:26
License: not specified in port
"The SEQIO package is a set of C functions which can read and write
biological sequence files formatted using various file formats and which
can be used to perform database searches on biological databases."
- from the README file

WWW: http://www.cs.ucdavis.edu/~gusfield/seqio.html
SVNWeb : Homepage : PortsMon

To install the port: cd /usr/ports/biology/seqio/ && make install clean
To add the package: pkg install seqio

PKGNAME: seqio

distinfo:

SHA256 (seqio.tar.gz) = 0c1f8a55adeb900c749d1412aaa86b85ff3043b2db2dda3b884c101ea5e5d1fb
SIZE (seqio.tar.gz) = 360714

There are no ports dependent upon this port


Configuration Options
===> The following configuration options are available for seqio-1.2.2_1:
     DOCS=on: Build and/or install documentation
     EXAMPLES=on: Build and/or install examples
===> Use 'make config' to modify these settings

Master Sites:
  1. http://www.cs.ucdavis.edu/~gusfield/

Number of commits found: 17

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
16 Feb 2014 11:42:09
Original commit files touched by this commit  1.2.2_1
Revision:344538
ehaupt search for other commits by this committer
Support staging
20 Sep 2013 15:55:44
Original commit files touched by this commit  1.2.2_1
Revision:327709
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
19 Jun 2013 21:04:36
Original commit files touched by this commit  1.2.2_1
Revision:321327
bsam search for other commits by this committer
Remove stale (since r321246) pkg-plist file.
19 Jun 2013 13:30:50
Original commit files touched by this commit  1.2.2_1
Revision:321248
bsam search for other commits by this committer
Forced commit to show previous changes:
-----
. NOPORTDOCS -> PORT_OPTIONS:MDOCS;
. NOPORTEXAMPLES -> PORT_OPTIONS:MEXAMPLES;
. use PLIST_FILES, PORTEXAMPLES and PORTDOCS;
. get rid of pkg-plist;
. use plain install commands instead of .for loops;
. remove unnecessary mkdir command (the following one creates a subdirectory);
. mute mkdirs;
. trim Makefile headers;
. remove the indefinite article from COMMENT.
-----
19 Jun 2013 13:09:19
Original commit files touched by this commit  1.2.2_1
Revision:321246
bsam search for other commits by this committer
Index: Makefile
===================================================================
--- Makefile	(revision 321238)
+++ Makefile	(working copy)
@@ -1,9 +1,5 @@
-# New ports collection makefile for:	seqio
-# Date created:				17 August 2001
-# Whom:					Tony Maher
-#
+# Created by: Tony Maher
 # $FreeBSD$
-#

 PORTNAME=	seqio
 PORTVERSION=	1.2.2
(Only the first 15 lines of the commit message are shown above View all of this commit message)
19 Mar 2011 12:38:54
Original commit files touched by this commit  1.2.2_1
miwi search for other commits by this committer
- Get Rid MD5 support
21 Dec 2009 02:19:12
Original commit files touched by this commit  1.2.2_1
dougb search for other commits by this committer
For ports maintained by ports@FreeBSD.org, remove names and/or
e-mail addresses from the pkg-descr file that could reasonably
be mistaken for maintainer contact information in order to avoid
confusion on the part of users looking for support. As a pleasant
side effect this also avoids confusion and/or frustration for people
who are no longer maintaining those ports.
12 Jul 2008 06:28:25
Original commit files touched by this commit  1.2.2_1
itetcu search for other commits by this committer
- respect NOPORTEXAMPLES/NOPORTDOCS and fix plist
- bump PORTREVISION

Prompted by:    QA Tindy run
26 Dec 2006 12:46:34
Original commit files touched by this commit  1.2.2
linimon search for other commits by this committer
Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response
to email.

Hat:            portmgr
22 Jan 2006 08:20:34
Original commit files touched by this commit  1.2.2
edwin search for other commits by this committer
SHA256ify

Approved by:    krion@
09 Jan 2006 03:25:03
Original commit files touched by this commit  1.2.2
edwin search for other commits by this committer
Fix maintainer address

    From: Tony Maher <anthony.maher@uts.edu.au>
    To: Edwin Groothuis <edwin@FreeBSD.org>
    Subject: Re: ports/91537: maths/xgobi - download site moved/maintainer
addressupdate

    Actually I need  modify all my ports to use OptusNet rather than
    Biolateral.  Is there an easy way to do this or should I submit a
    separate 1-line patch and PR for each port?

    biology/crimap
    biology/dna-qc
    biology/flip
    biology/primer3
    biology/seqio
    biology/wise
    math/xgobi
    net/generic-nqs

Submitted by:   Tony Maher <anthony.maher@uts.edu.au>
31 Mar 2004 03:12:58
Original commit files touched by this commit  1.2.2
trevor search for other commits by this committer
SIZEify (maintainer timeout)
22 Oct 2003 23:44:05
Original commit files touched by this commit  1.2.2
kris search for other commits by this committer
Respect CC and CFLAGS
22 Oct 2003 09:29:55
Original commit files touched by this commit  1.2.2
osa search for other commits by this committer
Cosmetic fix: use %%DOCSDIR%% macro.
No functionally changes.

Submitted by:   Oleg Karachevtsev <ok@etrust.ru>
A part of PR:   57992
21 Feb 2003 11:01:38
Original commit files touched by this commit  1.2.2
knu search for other commits by this committer
De-pkg-comment.
21 Oct 2001 08:51:32
files touched by this commit
knu search for other commits by this committer
Remove a redundant trailing space.    
22 Aug 2001 13:07:26
files touched by this commit
wjv search for other commits by this committer
Add seqio 1.2.2, a set of C functions which can read/write   biological sequence
files.    

Number of commits found: 17

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