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non port: biology/ssaha/Makefile

Number of commits found: 14

Saturday, 5 May 2018
10:49 antoine search for other commits by this committer
Deprecate ports broken for more than 6 months
Original commitRevision:469100 
Saturday, 10 Mar 2018
17:46 gerald search for other commits by this committer
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).
Original commitRevision:464084 
Friday, 13 Oct 2017
11:14 bapt search for other commits by this committer
Mark as broken ports with no public distfiles
Original commitRevision:451982 
Sunday, 10 Sep 2017
20:55 gerald search for other commits by this committer
Bump PORTREVISION for ports depending on the canonical version of GCC
(via Mk/bsd.default-versions.mk and lang/gcc) which has moved from
GCC 5.4 to GCC 6.4 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++11-lang,
   c++14-lang, c++0x, c11, or gcc-c++11-lib.

PR:		219275
Original commitRevision:449591 
Saturday, 1 Apr 2017
15:23 gerald search for other commits by this committer
Bump PORTREVISIONs for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.9.4 to GCC 5.4 (at least under some
circumstances such as versions of FreeBSD or platforms).

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using using Mk/bsd.octave.mk which in turn has USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c++11-lib, c++14-lang,
   c++11-lang, c++0x, c11, or gcc-c++11-lib.

PR:		216707
Original commitRevision:437439 
Sunday, 20 Nov 2016
09:38 gerald search for other commits by this committer
Bump PORTREVISIONS for ports depending on the canonical version of GCC and
lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some
circumstances such as versions of FreeBSD or platforms).

In particular that is ports with USE_GCC=yes, USE_GCC=any, or one of
gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang,
c++11-lang, c++0x, c11 requested via USES=compiler.
Original commitRevision:426566 
Saturday, 20 Dec 2014
17:27 bapt search for other commits by this committer
Cleanup plist
Original commitRevision:375014 
Sunday, 9 Mar 2014
09:39 rene search for other commits by this committer
biology/ssaha: undeprecate, this port fetches and builds fine.

Submitted by:	Kurt Jaeger via private mail.
Original commitRevision:347560 
Friday, 7 Feb 2014
18:50 bapt search for other commits by this committer
Deprecate ports unmaintained for which distillator is not able to find public
distfiles

Reported by:	distilator
Original commitRevision:343287 
Saturday, 25 Jan 2014
16:48 miwi search for other commits by this committer
- Fix build on -current
- Update MASTER_SITES and WWW: line
- Support CXX/CXXFLAGS properly
- Support PLIST_FILES
- Stage support

PR:		184852
Submitted by:	Ports Fury
Original commitRevision:341053 
Friday, 20 Sep 2013
15:55 bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Original commitRevision:327709 
Monday, 1 Oct 2012
14:45 tabthorpe search for other commits by this committer
- Reassign to the heap at maintainer's request
Original commitRevision:305130 
Saturday, 21 Jun 2008
02:46 lippe search for other commits by this committer
- Fix plist files installation.
- Bump PORTREVISION.

Reported by:    QA Tindy
Approved by:    gabor (mentor, implicit)
Original commit
00:01 lippe search for other commits by this committer
SSAHA is a software tool for very fast matching and alignment of DNA
sequences. It stands for Sequence Search and Alignment by Hashing
Algorithm. It achieves its fast search speed by converting sequence
information into a `hash table' data structure, which can then be
searched very rapidly for matches.

WWW: http://www.sanger.ac.uk/Software/analysis/SSAHA/

PR:             ports/124525
Submitted by:   Fernan Aguero <fernan@iib.unsam.edu.ar>
Approved by:    gabor (mentor, implicit)
Original commit

Number of commits found: 14