2912 FreshPorts -- biology/ugene
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Port details
ugene 1.11.4 biology on this many watch lists=0 search for ports that depend on this port
Free, open-source, cross-platform bioinformatics toolkit
Maintained by: h2+fbsdports@fsfe.org search for ports maintained by this maintainer
Port Added: 23 Feb 2013 04:51:12
License: GPLv2
Unipro UGENE is a multiplatform open-source software with the main goal of
assisting molecular biologists without much expertise in bioinformatics to
manage, analyze and visualize their data.  UGENE integrates widely used
bioinformatics tools within a common user interface.

The toolkit supports multiple biological data formats and allows the
retrieval of data from remote data sources.  It provides visualization
modules for biological objects such as annotated genome sequences, Next
Generation Sequencing (NGS) assembly data, multiple sequence alignments,
phylogenetic trees and 3D structures.

WWW: http://ugene.unipro.ru/
SVNWeb : Main Web Site : Distfiles Availability : PortsMon

NOTE: FreshPorts displays only required dependencies information. Optional dependencies are not covered.

Required To Build:
  1. x11/libXtst
  2. x11-toolkits/qt4-gui
  3. devel/qt4-linguist
  4. devel/qt4-moc
  5. devel/qmake4
  6. devel/qt4-qtestlib
  7. devel/qt4-rcc
  8. graphics/qt4-svg
  9. devel/qt4-uic
  10. www/qt4-webkit
  11. textproc/qt4-xml
  12. devel/pkgconf
  13. graphics/gtk-update-icon-cache
Required To Run:
  1. shells/bash
  2. x11/libXtst
  3. x11-toolkits/qt4-gui
  4. graphics/qt4-imageformats
  5. graphics/qt4-svg
  6. www/qt4-webkit
  7. textproc/qt4-xml
  8. devel/pkgconf
  9. devel/gio-fam-backend
  10. graphics/gtk-update-icon-cache
Required Libraries:
  1. devel/libexecinfo
  2. graphics/libGLU
  3. accessibility/atk
  4. graphics/gdk-pixbuf2
  5. devel/glib20
  6. x11-toolkits/pango
There are no ports dependent upon this port

To install the port: cd /usr/ports/biology/ugene/ && make install clean
To add the package: pkg_add -r ugene

Configuration Options 
     No options to configure
Master Sites:
  1. ftp://ftp.FreeBSD.org/pub/FreeBSD/ports/distfiles/
  2. http://ugene.unipro.ru/downloads/

Number of commits found: 2

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
25 Feb 2013 13:00:16
Original commit files touched by this commit  1.11.4
 danfe search for other commits by this committer 
Unbreak on 7.X and i386 systems.

Reported by:	QAT
23 Feb 2013 04:50:48
Original commit files touched by this commit  1.11.4
 danfe search for other commits by this committer 
Add Unipro UGENE, a free open-source crowss-platform bioinformatics software.

PR:		ports/173387
Submitted by:	Hannes Hauswedell

Number of commits found: 2

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