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I am looking for an LTO tape library. Do you have one to spare?
Commit found by message id
Fri, 20 Sep 2013
[ 15:55:44 bapt ] Original commit   Revision:327709
ariadne biology files touched by this commit Programs to compare protein sequences and profiles
artemis biology files touched by this commit DNA sequence viewer and annotation tool
avida biology files touched by this commit Auto-adaptive genetic system designed for ALife research
babel biology files touched by this commit Converts among various molecular file formats
biococoa biology files touched by this commit Bioinformatics framework
biojava biology files touched by this commit Open-source Java tools for processing biological data
blast biology  Broken Deprecated Expiration Date Ignore files touched by this commit Restricted WU BLAST, a software package for sequence similarity searches
blat biology files touched by this commit Fast tool for local sequence similarity searches
boinc-simap biology files touched by this commit Similarity Matrix of Proteins project for BOINC
chemeq biology files touched by this commit Outputs LaTeX code for chemical reaction
clustalw biology files touched by this commit Restricted Multiple alignment program for DNA or proteins
consed biology  Deprecated Expiration Date files touched by this commit Restricted Graphical tool for editing Phrap assemblies
crux biology  Deprecated Expiration Date files touched by this commit Software toolkit for phylogenetic inference
dotter biology  Deleted Broken Deprecated Expired Ignore files touched by this commit Viewer for multiple sequence alignments
embassy biology  Broken Deprecated Expiration Date Ignore files touched by this commit Collection of contributed EMBOSS applications
emboss biology files touched by this commit Collection of open source tools for genetic sequence analysis
fasta biology files touched by this commit NO CDROM Collection of programs for searching DNA and protein databases
fasta3 biology files touched by this commit NO CDROM Collection of programs for searching DNA and protein databases
fastdnaml biology files touched by this commit Faster DNAML, makes phylogenetic trees using maximum likelihood
finchtv biology  Deleted Broken Deprecated Expired Ignore files touched by this commit A chromatogram trace viewer
fluctuate biology files touched by this commit Program to fit population models
garlic biology files touched by this commit Molecular viewer, editor, and visualization program
genpak biology  Deleted Deprecated Expired files touched by this commit Utilities to manipulate DNA sequences
gff2ps biology files touched by this commit Converts gff-formated genomic data-sets to PostScript
gmap biology files touched by this commit Genomic Mapping and Alignment Program for mRNA and EST Sequences
gperiodic biology files touched by this commit Displays a periodic table of the elements
grappa biology files touched by this commit Genome Rearrangements Analysis and Phylogeny Software
hmmer biology files touched by this commit Profile hidden Markov models for biological sequence analysis
iolib biology files touched by this commit General purpose trace file (and Experiment File) reading interface
jalview biology files touched by this commit Viewer and editor for multiple sequence alignments
lagan biology files touched by this commit Efficient tools for large-scale multiple alignments of genomic DNA
lamarc biology files touched by this commit Package of programs for computing population parameters
libgenome biology  Deleted Deprecated Expired files touched by this commit Toolkit for developing bioinformatic related software in C++
libsbml biology files touched by this commit API Library for Working with SBML File
linux-foldingathome biology files touched by this commit Distributed client for Protein Folding
mafft biology files touched by this commit Multiple alignment program for amino acid or nucleotide sequences
mapm3 biology files touched by this commit Constructs linkage maps of markers segregating in experimental crosses
migrate biology files touched by this commit Program to estimate population sizes and migration rates
molden biology files touched by this commit Restricted Display molecular orbitals and electron densities in 2D and 3D
mopac biology files touched by this commit Semi-empirical (MNDO, etc.) molecular orbital calculation
mrbayes biology files touched by this commit Bayesian inference of phylogeny
mummer biology files touched by this commit Modular system for rapid whole genome alignment
muscle biology files touched by this commit MUltiple Sequence Comparison by Log-Expectation
ncbi-toolkit biology files touched by this commit NCBI development toolkit, including BLAST 2 and GenBank/Entrez support
njplot biology files touched by this commit Phylogenetic tree drawing program capable of interactive manipulation
ortep3 biology files touched by this commit Oak Ridge Thermal Ellipsoid Plot Program for Crystal Structure
p5-AcePerl biology files touched by this commit Perl5 interface to the ACEDB genome database system
p5-Bio-ASN1-EntrezGene biology files touched by this commit Regular expression-based Perl Parser for NCBI Entrez Gene
p5-Bio-Das biology files touched by this commit Client-side library for Distributed Genome Annotation System
p5-Bio-Das-Lite biology files touched by this commit Perl extension for the DAS (HTTP+XML) Protocol
p5-Bio-GFF3 biology files touched by this commit Fast low-level functions for parsing and formatting GFF3
p5-Bio-Glite biology files touched by this commit Perl Interface to G-language
p5-Bio-Graphics biology files touched by this commit Generate GD Images of Bio::Seq Objects
p5-Bio-MAGETAB biology files touched by this commit Data model and utility API for the MAGE-TAB format
p5-Bio-NEXUS biology files touched by this commit Object-oriented Perl API for the NEXUS file format
p5-Bio-Phylo biology files touched by this commit Phylogenetic analysis using Perl
p5-Bio-SCF biology files touched by this commit Read and Update SCF Chromatographic Sequence Files
p5-bioperl biology files touched by this commit Collection of Perl modules for bioinformatics
p5-bioperl-run biology  Broken Deprecated Expiration Date Ignore files touched by this commit Wrapper modules for common bioinformatics tools
paml biology files touched by this commit Phylogenetic Analysis by Maximum Likelihood (PAML)
phd2fasta biology  Deprecated Expiration Date Ignore files touched by this commit Restricted Converter from output files of Phred/Consed to FASTA files
phrap biology  Ignore files touched by this commit Restricted Phrap is a program for assembling shotgun DNA sequence data
phred biology files touched by this commit Restricted Base calling and quality value assignment on DNA sequencing
phylip biology files touched by this commit Phylogeny Inference Package
phyml biology files touched by this commit Simple, fast, and accurate algorithm to estimate large phylogenies
platon biology files touched by this commit Restricted Tool for viewing molecular/crystallographic structures
plink biology files touched by this commit Whole genome association analysis toolset
plinkseq biology files touched by this commit Toolset for working with human genetic variation data
povchem biology files touched by this commit Simple yet powerful tool to generate POV from a PDB file
primer3 biology files touched by this commit Primer3 helps to choose primers for PCR reactions
protomol biology  Deprecated Expiration Date files touched by this commit OO, component based, framework for molecular dynamics (MD) simulations
psi88 biology files touched by this commit Plotting wavefunctions (molecular orbitals) in 3D
py-biopython biology files touched by this commit Collection of Python modules for bioinformatics
pycogent biology files touched by this commit Toolkit for statistical analysis of biological sequences
pyfasta biology files touched by this commit Fast, memory-efficient, pythonic access to fasta sequence files
pymol biology  Deprecated Expiration Date files touched by this commit Free and Open-Source molecular modeling system
python-nexus biology files touched by this commit Generic nexus file format reader for python
rasmol biology  Deleted Deprecated Expired files touched by this commit Fast Molecular Visualization Program
recombine biology files touched by this commit Program to fit population models across sites
ruby-bio biology files touched by this commit Integrated environment for Bioinformatics written in Ruby
seaview biology files touched by this commit Multiple DNA/protein sequence alignment editor
seqan biology files touched by this commit C++ Sequence Analysis Library
seqio biology files touched by this commit Set of C functions which can read/write biological sequence files
sim4 biology files touched by this commit Algorithm for aligning expressed DNA with genomic sequences
ssaha biology files touched by this commit Very fast matching and alignment of DNA sequences
tRNAscan-SE biology files touched by this commit Improved tool for transfer RNA detection
t_coffee biology files touched by this commit Multiple DNA or protein sequence alignment package
tinker biology files touched by this commit Restricted General purpose molecular modelling package
treepuzzle biology files touched by this commit Maximum likelihood phylogeny reconstruction using quartets
treeviewx biology files touched by this commit Phylogenetic tree viewer
ugene biology files touched by this commit Free, open-source, cross-platform bioinformatics toolkit
velvet biology files touched by this commit Sequence assembler for very short reads
wise biology files touched by this commit Intelligent algorithms for DNA searches
xmolwt biology files touched by this commit Calculate atom weight and percent of each element for a given formula
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)

Number of ports [& non-ports] in this commit: 94

Showing files for just one port: biology/libgenome

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modify 327709 View diff View revision /ports/head/biology/libgenome/Makefile
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