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Port details
R-cran-car 2.0.21_1 math on this many watch lists=0 search for ports that depend on this port
Companion to Applied Regression for R
Maintained by: dbn@FreeBSD.org search for ports maintained by this maintainer
Port Added: 02 May 2009 17:34:13
License: GPLv2


This package accompanies J. Fox, An R and S-PLUS Companion to Applied
Regression, Sage, 2002. The package contains mostly functions for applied
regression, linear models, and generalized linear models, with an emphasis on
regression diagnostics, particularly graphical diagnostic methods. There are
also some utility functions. With some exceptions, I have tried not to duplicate
capabilities in the basic distribution of R, nor in widely used packages. Where
relevant, the functions in car are consistent with na.action = na.omit or
na.exclude.

WWW:	http://cran.r-project.org/web/packages/car/index.html
SVNWeb : Main Web Site : Distfiles Availability : PortsMon

NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Required To Build:
  1. math/R
Required To Run:
  1. math/R

This port is required by:

for Run * - deleted ports are only shown under the This port is required by section. It was harder to do for the Required section. Perhaps later...

To install the port: cd /usr/ports/math/R-cran-car/ && make install clean
To add the package: pkg install math/R-cran-car


Configuration Options
     No options to configure

Master Sites:
  1. http://cran.cnr.berkeley.edu/src/contrib/
  2. http://cran.cnr.berkeley.edu/src/contrib/Archive/car/
  3. http://cran.md.tsukuba.ac.jp/src/contrib/
  4. http://cran.md.tsukuba.ac.jp/src/contrib/Archive/car/
  5. http://cran.ms.unimelb.edu.au/src/contrib/
  6. http://cran.ms.unimelb.edu.au/src/contrib/Archive/car/
  7. http://cran.rakanu.com/src/contrib/
  8. http://cran.rakanu.com/src/contrib/Archive/car/
  9. http://cran.stat.unipd.it/src/contrib/
  10. http://cran.stat.unipd.it/src/contrib/Archive/car/
  11. http://cran.univ-lyon1.fr/src/contrib/
  12. http://cran.univ-lyon1.fr/src/contrib/Archive/car/
  13. http://distcache.FreeBSD.org/ports-distfiles/
  14. http://ftp.ctex.org/mirrors/CRAN/src/contrib/
  15. http://ftp.ctex.org/mirrors/CRAN/src/contrib/Archive/car/
  16. http://ftp5.gwdg.de/pub/misc/cran/src/contrib/
  17. http://ftp5.gwdg.de/pub/misc/cran/src/contrib/Archive/car/
  18. http://mirror.its.dal.ca/cran/src/contrib/
  19. http://mirror.its.dal.ca/cran/src/contrib/Archive/car/
  20. http://mirrors.dotsrc.org/cran/src/contrib/
  21. http://mirrors.dotsrc.org/cran/src/contrib/Archive/car/
  22. http://mirrors.ibiblio.org/pub/mirrors/CRAN/src/contrib/
  23. http://mirrors.ibiblio.org/pub/mirrors/CRAN/src/contrib/Archive/car/

Number of commits found: 44

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
10 Sep 2014 20:50:37
Original commit files touched by this commit  2.0.21_1
Revision:367888
gerald search for other commits by this committer
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
23 Aug 2014 17:30:43
Original commit files touched by this commit  2.0.21
Revision:365761
dbn search for other commits by this committer
Update math/R-cran-car to 2.0-21.

ChangeLog:
 * residualPlot error when using 'type="rstudent" has been fixed.
 * Minor change to "recode" documentation; improved error checking in
    recode().
 * Fixed a bug in gamLine with non-canonical links. (Thanks to Hani Christoph)
 * Added has.intercept.multinom() to make Anova() work with multinom objects
    fit to a dichotomous response (after bug report by Kristian Hovde Liland).
 * Replaced vif.lm() with vif.default() to cover wider variety of models
    (after question by Laura Rigg about gls models).
 * Diagonal panels in scatterplotMatrix() (except for histograms) show
     groups separately when plotted by groups (suggestion by Erich Neuwirth).
 * Added vcov. argument to Anova.lm().
03 May 2014 09:41:29
Original commit files touched by this commit  2.0.20
Revision:352896
dbn search for other commits by this committer
Update math/R-cran-car to 2.0-20.

ChangeLog:
 o Added new id.method="r" to showLabels for labeling plots of residuals;
   default id.method changed in residualPlots.
 o Fixed handling of labels argument to outlierTest()
   (bug report by Stephane Laurent).
 o Accommodate numeric variables consisting entirely of NAs in recode()
   (suggestion of Karl Ove Hufthammer).
 o Prevent dataEllipse() from opening a graphics device when draw=FALSE
   (fixing bug reported by Rafael Laboissiere).
 o The functions makeHypothesis() and printHypothesis(), intended for
   internal use, are exported so that they can be used in other packages
   (request of Arne Henningsen).
 o Small fixes.
10 Mar 2014 20:55:22
Original commit files touched by this commit  2.0.19_3
Revision:347809
gerald search for other commits by this committer
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
28 Dec 2013 10:28:41
Original commit files touched by this commit  2.0.19_2
Revision:337846
dbn search for other commits by this committer
Convert Mk/bsd.cran.mk to the Uses framework.

PR:		ports/184699
Reviewed by:	bapt
Approved by:	portmgr (bdrewery), wen (maintainer, timeout > 2 weeks)
27 Nov 2013 18:56:44
Original commit files touched by this commit  2.0.19_2
Revision:335044
dbn search for other commits by this committer
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).

Since this patch converts all affected ports, bsd.cran.mk no longer supports
NO_STAGE and errors out if NO_STAGE is set.

Exp-run:	ports/184216
Reviewed by:	bdrewery
Approved by:	portsmgr, wen
13 Nov 2013 08:19:35
Original commit files touched by this commit  2.0.19_2
Revision:333659
bf search for other commits by this committer
Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;
adjust dependent ports

Reviewed by:	pfg, thierry, tota
26 Oct 2013 00:52:36
Original commit files touched by this commit  2.0.19_1
Revision:331644
gerald search for other commits by this committer
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
06 Oct 2013 17:32:54
Original commit files touched by this commit  2.0.19
Revision:329606
dbn search for other commits by this committer
Update math/R-cran-car to 2.0.19.

ChangeLog:
 * fixed scoping problems in Boot, bootCase, and ncvTest
 * added an argument to deltaMethod for passing arguments to get scoping right
when calling linearHypothesis in another function; other deltaMethod bugs fixed
 * slight modification to documentation of Boot
 * summary() method for "Anova.mlm" objects now returns an object, printed by a
corresponding print() method (adapting code contributed by Gabriel Baud-Bovy).
 * added .merMod methods to Anova(), deltaMethod(), linearHypothesis(),
matchCoefs(), and unexported utilities df.residual() and has.intercept();
insured compatibility with nlme and CRAN and developments versions of lme4.
 * added use argument to scatterplotMatrix() (suggstion of Antoine Lizee).
 * export linearHypothesis.default() for use in other packages (suggestion of
Achim Zeileis).
 * small changes and fixes.
20 Sep 2013 20:55:06
Original commit files touched by this commit  2.0.18
Revision:327746
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
math)
17 Jun 2013 11:50:39
Original commit files touched by this commit  2.0.18
Revision:321100
dbn search for other commits by this committer
Update math/R-cran-car to 2.0-18.

ChangeLog:
 o Bug fix to boot with type="residual"
 o Added densityPlot() function.

Approved by:	eadler,bdrewery (mentors, implicit)
28 May 2013 15:15:06
Original commit files touched by this commit  2.0.17_1
Revision:319316
bf search for other commits by this committer
Update math/R to 3.0.1-patched, and adjust dependent ports;
synchronize math/rpy with upstream repository

Reviewed by:	wen
Approved by:	wen, tota
06 May 2013 18:10:36
Original commit files touched by this commit  2.0.17
Revision:317535
dbn search for other commits by this committer
Update math/R-cran-car to 2.0-17.

ChangeLog:
    o Add a variable to AMSsurvey.
    o Fix to residualPlots to compute lack of fit tests with missing values and
      glms.
    o Fix to residualPlots with a 0/1 variable not declared a factor.
    o Boxplot() now works properly with at argument passed to boxplot() via ...
      (contribution of Steve Ellison).
    o qqPlot.lm() now works with "aov" objects (fixing problem reported by
      Thomas Burk).
    o Small fixes to code and docs.

Approved by:	eadler,bdrewery (mentors, implicit)
07 Mar 2013 04:21:35
Original commit files touched by this commit  2.0.16_2
Revision:313562
bf search for other commits by this committer
update math/R to 2.15.3, and adjust dependent ports
20 Feb 2013 17:49:00
Original commit files touched by this commit  2.0.16_1
Revision:312635
dbn search for other commits by this committer
Update math/R-cran-car to 2.0-16.

Changes to Version 2.0-16

    o Fixed bug in printing of hypotheses by linearHypothesis(), where numeric
constants of the form 1.* or -1.* were printed incorrectly (reported by
Johannes Kutsam).

    o Fixed a bug in showLabels() with multiple groups in the scatterplot() and
scatterplotMatrix() function

    o linearHypothesisTest() now tolerates newlines and tabs in hypotheses
(suggestion of David Hugh-Jones).

    o two bugs fixed in Boot() (found by David Pain) changed argument f to f.
in bootCase().

    o summary.Boot(), confint.Boot() and hist.Boot() handle aliases correctly.

    o Boxplot.formula() now accepts more than one conditioning variable
(suggestion of Christina Yassouridis).

    o Small fixes.

Approved by:	bdrewery (mentor)
16 Jan 2013 20:15:07
Original commit files touched by this commit  2.0.15_1
Revision:310522
dbn search for other commits by this committer
 - Update to my new FreeBSD address
 - Trim header
 - Add myself as creator of devel/svn2git (see r272261)

Approved by:	eadler|bdrewery (mentor)
04 Jan 2013 17:51:39
Original commit files touched by this commit  2.0.15_1
Revision:309935
bf search for other commits by this committer
update the R base ports to 2.15.2 and adjust dependent ports

Reviewed by:	thierry, tota, wen
20 Oct 2012 16:19:21
Original commit files touched by this commit  2.0.15
Revision:306202
rakuco search for other commits by this committer
Update to 2.0-15.

PR:		ports/172776
Submitted by:	David Naylor <naylor.b.david@gmail.com> (maintainer)
Feature safe:	yes
01 Oct 2012 09:51:16
Original commit files touched by this commit  2.0.14
Revision:305102
wen search for other commits by this committer
- Update to 2.0-14 [1]
- Convert to new Makefile format

PR:		172136 [1]
Submitted by:	David Naylor <naylor.b.david@gmail.com> (maintainer) [1]
26 Jun 2012 23:57:00
Original commit files touched by this commit  2.0.12_2
bf search for other commits by this committer
update math/R to 2.15.1, switch to the new options format, and
adjust dependent ports
04 May 2012 20:56:15
Original commit files touched by this commit  2.0.12_1
bf search for other commits by this committer
- update math/R-cran-psych to 1.2.1 [1]
- update math/R to 2.15.0, and adjust dependent ports
- minor changes to bsd.cran.mk [2]: rename MASTER_CRAN_SITES to
  MASTER_SITE_CRAN, as in bsd.sites.mk; make the install target more
  flexible and allow CRAN ports to override it; add a regression-test
  target; set USE_FORTRAN to match math/R; remove some of the
  redundant checks of USE_R_MOD; honor NOPORTDATA and NOPORTDOCS

Reviewed by:    thierry, tota, wen
Approved by:    D. Rue (maintainer) [1], wen [2]
27 Mar 2012 20:08:25
Original commit files touched by this commit  2.0.12
rm search for other commits by this committer
- update to 2.0-12

PR:             166437
Submitted by:   David Naylor <naylor.b.david at gmail dot com> (maintainer)
Feature safe:   yes
03 Mar 2012 16:59:36
Original commit files touched by this commit  2.0.11_3
bf search for other commits by this committer
update math/R to 2.14.2, and adjust dependent ports
18 Jan 2012 23:04:08
Original commit files touched by this commit  2.0.11_2
bf search for other commits by this committer
update math/R to 2.14.1, and adjust dependent ports
27 Nov 2011 07:02:15
Original commit files touched by this commit  2.0.11_1
bf search for other commits by this committer
update math/R to 2.14.0, math/R-cran-sp to 0.9-91, and adjust
dependent ports

Approved by:    linimon (portmgr), thierry, tota, wen
Feature safe:   yes
15 Nov 2011 20:09:02
Original commit files touched by this commit  2.0.11
tota search for other commits by this committer
- Move PKGNAMEPREFIX defined in each R-cran- related ports Makefile
  to Mk/bsd.cran.mk

PR:             ports/162238
Submitted by:   tota (myself)
Approved by:    wen (maintainer of Mk/bsd.cran.mk and many related ports),
                David Naylor <naylor_DOT_b_DOT_david_AT_gmail_DOT_com>
                  (maintainer of math/R-cran-RSvgDevice and math/R-cran-car),
                Dan Rue <drue_AT_therub_DOT_org>
                  (maintainer of math/R-cran-psych, timeout > 2 weeks)
Feature safe:   yes
29 Oct 2011 18:20:43
Original commit files touched by this commit  2.0.11
tota search for other commits by this committer
- Update to 2.0-11

PR:             ports/161918
Submitted by:   David Naylor (maintainer)
11 Oct 2011 14:19:46
Original commit files touched by this commit  2.0.10_2
bf search for other commits by this committer
update math/R to 2.13.2, and adjust dependent ports
28 Jul 2011 04:19:58
Original commit files touched by this commit  2.0.10_1
bf search for other commits by this committer
update R to 2.13.1 [1], and adjust dependent ports (this
includes workarounds intended to fix the broken sparc64
build, and fixes to the static libR, which is now in a
separate slave port, math/libR)

PR:             158947 [1]
Submitted by:   wen ([1], independently)
08 May 2011 05:11:41
Original commit files touched by this commit  2.0.10
bf search for other commits by this committer
update to 2.0-10

PR:             156858
Submitted by:   David Naylor (maintainer)
07 May 2011 03:29:59
Original commit files touched by this commit  1.2.16_3
bf search for other commits by this committer
- update to 2.13.0
- switch to the bundled Rblas and Rlapack by default (this
  can be changed by setting BLAS and LAPACK) which favors
  correctness in some corner cases over a slight performance
  penalty; this will be revisited after the blas and lapack
  updates
- replace the STATIC_LIBR option with a LIBR option (on
  by default): if on, libR.a and libR.so are installed,
  and R is linked to libR.so. Otherwise, R is static, and
  no libRs are installed.
- remove the superfluous copy of libR.so in ${LOCALBASE}/lib [1]
- enable the cairo and pango elements in the X11() graphics
  device by default, controlled by new PANGOCAIRO option
- add a few small patches to dependent ports, bumping
  PORTREVISION where necessary

PR:             153309 [1]
Approved by:    thierry (rkward*), wen (rpy*, R-cran-*)
30 Apr 2011 07:59:13
Original commit files touched by this commit  1.2.16_2
bf search for other commits by this committer
Use DISTVERSION for CRAN ports with hyphenated versions

Approved by:    wen
20 Mar 2011 12:54:45
Original commit files touched by this commit  1.2.16_2
miwi search for other commits by this committer
- Get Rid MD5 support
28 Feb 2011 16:03:13
Original commit files touched by this commit  1.2.16_2
bf search for other commits by this committer
- Update R to 2.12.2, a bugfix release
- Bump PORTREVISION of dependent ports,
  where necessary

Approved by:    makc, miwi (mentors, implicit)
29 Jan 2011 16:53:21
Original commit files touched by this commit  1.2.16_1
bf search for other commits by this committer
- Update R to 2.12.1
- Bump PORTREVISION of
  dependent ports

Approved by:    makc, miwi (mentors, implicit)
                pav (portmgr)
Feature safe:   yes
26 Sep 2010 07:59:14
Original commit files touched by this commit  1.2.16
tota search for other commits by this committer
- Add CRAN_Include_MAINTAINER tag to Mk/bsd.cran.mk
- Rename R_MOD to USE_R_MOD to be suitable for bsd.port.mk
- Remove math/R-cran-sm/files/bsd.cran.mk to complete the moving

Approved by:    wen (via e-mail)
15 Aug 2010 02:48:05
Original commit files touched by this commit  1.2.16
tota search for other commits by this committer
- Use R_MOD_AUTOPLIST instead of pkg-plist

Approved by:    wen
24 Apr 2010 07:35:44
Original commit files touched by this commit  1.2.16
wen search for other commits by this committer
- Update to 1.2.16

Approved by:    maintainer(implicit)
28 Mar 2010 06:47:48
Original commit files touched by this commit  1.2.13_4
dinoex search for other commits by this committer
- update to 1.4.1
Reviewed by:    exp8 run on pointyhat
Supported by:   miwi
05 Feb 2010 11:46:55
Original commit files touched by this commit  1.2.13_3
dinoex search for other commits by this committer
- update to jpeg-8
25 Dec 2009 14:35:38
Original commit files touched by this commit  1.2.13_2
miwi search for other commits by this committer
- Fix build after math/R update

Submitted by:   wen@, "b. f." <bf1783@googlemail.com>
16 Oct 2009 14:00:34
Original commit files touched by this commit  1.2.13_1
wen search for other commits by this committer
- Change maintainer's email address

PR:             ports/139655
Submitted by:   David Naylor <naylor.b.david@gmail.com> (maintainer)
Approved by:    miwi(mentor)
31 Jul 2009 13:57:52
Original commit files touched by this commit  1.2.13_1
dinoex search for other commits by this committer
- bump all port that indirectly depends on libjpeg and have not yet been bumped
or updated
Requested by:   edwin
02 May 2009 17:33:29
Original commit files touched by this commit  1.2.13
wxs search for other commits by this committer
This package accompanies J. Fox, An R and S-PLUS Companion to Applied
Regression, Sage, 2002. The package contains mostly functions for applied
regression, linear models, and generalized linear models, with an emphasis on
regression diagnostics, particularly graphical diagnostic methods. There are
also some utility functions. With some exceptions, I have tried not to duplicate
capabilities in the basic distribution of R, nor in widely used packages. Where
relevant, the functions in car are consistent with na.action = na.omit or
na.exclude.

WWW:    http://cran.r-project.org/web/packages/car/index.html

PR:             ports/133708
Submitted by:   David Naylor <naylor.b.david@gmail.com>

Number of commits found: 44

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