| Category listing - science |
Scientific software.- Number of ports in this category: 230
Ports marked with a * actually reside within another category but
have science listed as a secondary category.
|
- 2d-rewriter 1.4

- Cellular automata simulator
Maintained by: iserikov@acm.org  Port Added: 24 May 2008 06:51:55
License: not specified in port
- 2dhf 2005.05_4

- A Numerical Hartree-Fock Program for Diatomic Molecules
Maintained by: maho@FreeBSD.org  Port Added: 24 Jul 2003 09:50:58
License: not specified in port
- InsightToolkit 2.8.1_2

- Insight Toolkit
Maintained by: jwbacon@tds.net  Port Added: 07 Sep 2006 03:14:06
Also Listed In: biology
License: not specified in port
- R-cran-AMORE 0.2.12_5

- A MORE flexible neural network package
Maintained by: wen@FreeBSD.org  Port Added: 07 Mar 2011 10:57:29
License: not specified in port
- R-cran-DCluster 0.2.3_3

- Functions for the detection of spatial clusters of diseases
Maintained by: tota@FreeBSD.org  Port Added: 18 Sep 2011 02:48:14
License: GPLv2
- R-cran-Epi 1.1.33

- A package for statistical analysis in epidemiology
Maintained by: tota@FreeBSD.org  Port Added: 17 Sep 2011 07:00:53
License: GPLv2
- R-cran-bayesm 2.2.4_5

- Bayesian Inference for Marketing/Micro-econometrics
Maintained by: wen@FreeBSD.org  Port Added: 07 Mar 2011 12:05:11
License: not specified in port
- R-cran-e1071 1.6

- Misc Functions of the Department of Statistics (e1071), TU Wien
Maintained by: tota@FreeBSD.org  Port Added: 11 Feb 2012 02:26:45
License: GPLv2
- R-cran-eco 3.1.5_3

- R Package for Ecological Inference in 2x2 Tables
Maintained by: wen@FreeBSD.org  Port Added: 28 Sep 2011 07:33:28
License: not specified in port
- R-cran-epicalc 2.14.1.0

- Epidemiological calculator
Maintained by: wen@FreeBSD.org  Port Added: 15 Dec 2011 01:21:12
License: not specified in port
- R-cran-psych 1.0.94_5*

- Psych package for the R project
Maintained by: drue@therub.org  Port Added: 16 Sep 2010 10:39:05
Also Listed In: math
License: not specified in port
- R-cran-snow 0.3.8

- Support for simple parallel computing in R
Maintained by: tota@FreeBSD.org  Port Added: 31 Jan 2012 13:14:46
License: not specified in port
- abinit 5.7.3_9

- Abinit calculates electronic structure of systems
Maintained by: maho@FreeBSD.org  Port Added: 14 Aug 2004 01:47:33
License: not specified in port
- afni 2008.01.02.1043_6

- Advanced Functional Neuro Imaging
Maintained by: jwbacon@tds.net  Port Added: 25 Jan 2006 17:37:44
Also Listed In: biology graphics
License: not specified in port
- ann 1.1.2*

- A Library for Approximate Nearest Neighbor Searching
Maintained by: tzhuan@csie.org  Port Added: 06 May 2010 08:15:12
Also Listed In: math
License: not specified in port
- avogadro 1.0.1_1

- An advanced molecular editor and viewer
Maintained by: tkjacobsen@gmail.com  Port Added: 22 May 2009 22:17:07
License: not specified in port
- bamg 1.01*

RESTRICTED: No resale, contact author for commercial usage Bidimensional Anisotropic Mesh Generator
Maintained by: stephen@FreeBSD.org  Port Added: 02 Jan 2004 21:57:44
Also Listed In: math
License: not specified in port
- bddsolve 1.02

- BDD-based satisfiability and reachability solver
Maintained by: ed@FreeBSD.org  Port Added: 12 May 2010 13:26:00
License: not specified in port
- bft 1.0.8

- Code_Saturne Base Functions and Types library
Maintained by: thierry@FreeBSD.org  Port Added: 17 Jun 2007 21:06:27
Also Listed In: parallel
License: not specified in port
- bodr 9

- Chemistry data like element and isotope properties, atomic radii, etc
Maintained by: pav@FreeBSD.org  Port Added: 24 May 2007 22:17:29
License: not specified in port
- brian 1.3.1

- A clock-driven simulator for spiking neural networks
Maintained by: wen@FreeBSD.org  Port Added: 16 Mar 2009 06:08:12
Also Listed In: python
License: not specified in port
- buddy 2.4_1

- A Binary Decision Diagram library
Maintained by: llwang@infor.org  Port Added: 22 Jan 2005 15:02:04
License: not specified in port
- cdcl 5.3.3_6

RESTRICTED: No commercial use Scientific graphic library for geoscience
Maintained by: murashin@gfd-dennou.org  Port Added: 27 Feb 2004 22:36:22
Also Listed In: graphics
License: not specified in port
- cdf 3.3.0

- Device independent view of the CDF data model
Maintained by: stephen@FreeBSD.org  Port Added: 28 Jan 2006 20:45:09
License: not specified in port
- cdo 1.5.3

- Climate Data Operators
Maintained by: sunpoet@FreeBSD.org  Port Added: 11 Jun 2006 08:44:05
License: not specified in port
- cgnslib 2.5.5_1

- CFD General Notation System library code
Maintained by: thierry@FreeBSD.org  Port Added: 01 Apr 2007 09:00:41
License: AS-IS
- checkmol 0.4a_3

- Analyze molecules for the presence of functional groups
Maintained by: fernan@iib.unsam.edu.ar  Port Added: 19 Sep 2009 09:54:11
License: not specified in port
- chemical-mime-data 0.1.94_4

- A collection of chemical MIME types for UNIX desktops
Maintained by: pav@FreeBSD.org  Port Added: 24 May 2007 22:19:57
License: not specified in port
- chemtool 1.6.11_3

- Draw organic molecules easily and store them
Maintained by: maho@FreeBSD.org  Port Added: 30 Mar 2001 16:23:00
License: not specified in port
- chemtool-devel 1.7.20050716_6

- Drawing organic molecules easily and store them (developer version)
Maintained by: maho@FreeBSD.org  Port Added: 10 May 2003 01:29:41
License: not specified in port
- clhep 2.1.0.1

- Object-oriented toolkit for particle physics applications by CERN
Maintained by: dhn@FreeBSD.org  Port Added: 07 May 2001 21:02:21
License: not specified in port
- colt 1.2.0_1

- Java package for scalable scientific and technical computing
Maintained by: wenheping@gmail.com  Port Added: 01 May 2008 21:05:30
Also Listed In: java
License: not specified in port
- crf++ 0.54

- Yet Another CRF toolkit
Maintained by: clsung@FreeBSD.org  Port Added: 28 Jul 2006 03:39:46
Also Listed In: math
License: not specified in port
- crp 20031012*

- Automates the process of being the program chair of a conference
Maintained by: lars.eggert@gmx.net  Port Added: 01 Jun 2004 18:15:15
Also Listed In: www
License: not specified in port
- dcl 5.3.3_4

RESTRICTED: No commercial use Scientific graphic library for geoscience
Maintained by: murashin@gfd-dennou.org  Port Added: 24 Feb 2005 20:27:12
Also Listed In: graphics
License: not specified in port
- devisor 2.1_2

- Design and Visualization Software Resource for FeatFlow
There is no maintainer for this port. Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org  Port Added: 21 Jan 2005 19:05:12
Also Listed In: java
License: not specified in port
- dtiquery 1.1_5

IGNORE: you must manually fetch dtiquery-1.1.tar.gz from http://graphics.stanford.edu/projects/dti/, place it in /usr/ports/distfiles, and then run make again
RESTRICTED: Must register to download at http://graphics.stanford.edu/projects/dti/ Stanford DTI Visualization tool
Maintained by: jwbacon@tds.net  Port Added: 25 Feb 2008 12:56:30
Also Listed In: biology
License: not specified in port
- ecs 1.3.3_6

- Code_Saturne Preprocessor
Maintained by: thierry@FreeBSD.org  Port Added: 17 Jun 2007 21:06:27
License: not specified in port
- elmer-eio 5.4.0_3

- ELMER FEM Package Data base Interface
Maintained by: sylvio@FreeBSD.org  Port Added: 24 Apr 2006 19:50:37
License: not specified in port
- elmer-hutiter 5.4.0_4

- HUTIter library for use in the ELMER FEM package
Maintained by: sylvio@FreeBSD.org  Port Added: 24 Apr 2006 19:54:01
License: not specified in port
- elmer-matc 5.4.0_4

- MatC language library used by ELMER FEM package
Maintained by: sylvio@FreeBSD.org  Port Added: 24 Apr 2006 19:51:26
License: not specified in port
- elmer-meshgen2d 5.0.0_5

- A Mesh Generation Utility for use with the ELMER FEM package
Maintained by: sylvio@FreeBSD.org  Port Added: 24 Apr 2006 19:46:44
License: not specified in port
- elmergrid 5.4.0_2

- A Mesh Manipulation Utility for use with the ELMER FEM package
Maintained by: sylvio@FreeBSD.org  Port Added: 24 Apr 2006 19:49:55
License: not specified in port
- elmerpost 5.4.0_6

BROKEN: Does not compile on amd64
IGNORE: is marked as broken: Does not compile on amd64 Visualization of Numerical Results in the ELMER FEM package
Maintained by: sylvio@FreeBSD.org  Port Added: 24 Apr 2006 19:56:17
License: not specified in port
- emc2 2.16.c*

RESTRICTED: No resale, contact author for commercial usage A graphical editor of two-dimensional mesh geometries
There is no maintainer for this port. Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org  Port Added: 02 Jan 2004 22:04:37
Also Listed In: math
License: INRIA
- epte 2.0.7

- Electronic Periodic Table of the Elements
Maintained by: culot@FreeBSD.org  Port Added: 08 Sep 2010 03:09:56
License: not specified in port
- euler 1.61.0_5

- A program computes with real and complex numbers and matrices
There is no maintainer for this port. Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org  Port Added: 14 May 2002 03:59:45
License: not specified in port
- fann 2.1.0b*

- A free open source neural network library
Maintained by: tzhuan@csie.org  Port Added: 06 Mar 2007 19:16:27
Also Listed In: math
License: not specified in port
- fastcap 2.0.w.011109

- A three-dimensional capacitance extraction program
Maintained by: bf@FreeBSD.org  Port Added: 15 Mar 2006 10:37:13
Also Listed In: cad
License: not specified in port
- fasthenry 3.0.w.011109

- A multipole-accelerated inductance analysis program
Maintained by: bf@FreeBSD.org  Port Added: 15 Mar 2006 10:38:22
Also Listed In: cad
License: not specified in port
- feappv 2.2*

- Finite Element Analysis Program "personal version"
There is no maintainer for this port. Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org  Port Added: 03 Apr 2006 19:57:51
Also Listed In: cad
License: not specified in port
- felt 3.06_3

- A system for Finite Element Analysis
There is no maintainer for this port. Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org  Port Added: 08 Nov 2003 09:10:11
License: not specified in port
- flounder 0.40_11

- A quick way to visualize regularly spaced 4D data
There is no maintainer for this port. Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org  Port Added: 14 Oct 2002 20:11:36
License: not specified in port
- freefem 3.5.8_1*

- A language for the Finite Element Method
There is no maintainer for this port. Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org  Port Added: unknown
Also Listed In: math
License: not specified in port
- freemat 4.0_2*

- An environment for rapid engineering and scientific processing
Maintained by: glarkin@FreeBSD.org  Port Added: 02 Apr 2005 21:13:42
Also Listed In: math
License: GPLv2
- freemat-mpi 4.0_2*

IGNORE: no MPI support at the moment An environment for rapid engineering and scientific processing
Maintained by: glarkin@FreeBSD.org  Port Added: 02 Apr 2005 21:15:32
Also Listed In: math
License: GPLv2
- fvm 0.12.0_5

- Code_Saturne Finite Volume Mesh
Maintained by: thierry@FreeBSD.org  Port Added: 17 Jun 2007 21:06:27
Also Listed In: parallel
License: not specified in port
- g3data 1.5.3_3

- Utility for extracting data from graphs
Maintained by: bf@FreeBSD.org  Port Added: 02 Oct 2006 08:59:46
License: not specified in port
- gamess 20090112.3_2

RESTRICTED: NOT DISTRIBUTED FREELY. BUT YOU CAN OBTAIN SOURCE CODE FREELY. A freely obtainable ab-initio molecular orbital calculation program
Maintained by: maho@FreeBSD.org  Port Added: 13 Mar 2007 00:41:26
License: not specified in port
- gchemutils 0.12.10

- C++ classes and Gtk2 widgets related to chemistry
Maintained by: kwm@FreeBSD.org  Port Added: 08 Apr 2003 00:05:51
License: not specified in port
- gdis 0.89_5

- Display and manipulation of isolated molecules and periodic systems
There is no maintainer for this port. Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org  Port Added: 05 Mar 2002 00:36:20
License: not specified in port
- getdp 1.2.1_15

- A rather general finite element solver using mixed finite elements
Maintained by: stephen@FreeBSD.org  Port Added: 15 Nov 2004 22:31:16
License: not specified in port
- ghemical 2.99.2_2

- Ghemical is a computational chemistry software package
Maintained by: maho@FreeBSD.org  Port Added: 04 May 2003 02:34:18
License: not specified in port
- ghmm 0.7.0b

- General Hidden Markov Model Library in C
Maintained by: clsung@FreeBSD.org  Port Added: 28 Jul 2006 03:37:20
Also Listed In: math
License: not specified in port
- gnudatalanguage 0.9.2_1

- GDL, a free IDL compatible incremental compiler
Maintained by: thierry@FreeBSD.org  Port Added: 31 Oct 2005 18:49:27
Also Listed In: lang
License: GPLv2
- grads 1.9b4_4*

- The Grid Analysis and Display System
Maintained by: glewis@FreeBSD.org  Port Added: 07 Apr 2005 21:49:30
Also Listed In: graphics math
License: not specified in port
- gramps 3.3.0

- A GTK/GNOME-based genealogy program
Maintained by: freebsd@troback.com  Port Added: 01 Feb 2004 03:10:44
Also Listed In: gnome python
License: GPLv2
- gromacs 4.5.5_1

- Compute molecular dynamics
Maintained by: flo@FreeBSD.org  Port Added: 19 Oct 2004 01:46:50
License: not specified in port
- gsmc 1.1_3

- Smith chart program for impedance matching
Maintained by: db@FreeBSD.org  Port Added: 19 Mar 2006 20:51:41
Also Listed In: hamradio
License: not specified in port
- gsystem 0.5.1_6

- A multi-user virtual reality evolution and life simulation framework
Maintained by: raphael-langerhorst@gmx.at  Port Added: 28 Dec 2004 23:36:57
Also Listed In: devel games ipv6
License: not specified in port
- gtamsanalyzer 0.42_2

- Qualitative Research Software for the Free World for GNUstep
Maintained by: dinoex@FreeBSD.org  Port Added: 27 Sep 2006 20:00:29
Also Listed In: gnustep
License: GPLv2
- gwyddion 2.16_4

- A gtk2 based SPM data visualization and analysis tool
Maintained by: yeti@gwyddion.net  Port Added: 12 Aug 2006 22:35:24
Also Listed In: graphics
License: not specified in port
- h5utils 1.12.1

- A set of utilities for visualization and conversion of HDF5 format
Maintained by: aehlig@linta.de  Port Added: 18 Mar 2011 19:43:05
License: MIT GPLv2
- harminv 1.3.1_1

- Solver of harmonic inversion
Maintained by: devel@stasyan.com  Port Added: 02 Jan 2010 02:54:49
License: not specified in port
- hdf 4.2r3_6

BROKEN: Does not fetch
IGNORE: is marked as broken: Does not fetch Hierarchical Data Format library (from NCSA)
There is no maintainer for this port. Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org  Port Added: 29 Feb 2004 09:10:58
Also Listed In: archivers graphics
License: not specified in port
- hdf-java 2.7_1

- Java interface to HDF5
Maintained by: rfarmer@predatorlabs.net  Port Added: 13 Feb 2010 11:22:34
Also Listed In: java
License: not specified in port
- hdf5 1.6.9_1

- Hierarchical Data Format library (from NCSA)
Maintained by: koziol@hdfgroup.org  Port Added: 25 Feb 2004 22:55:51
Also Listed In: archivers graphics
License: not specified in port
- hdf5-18 1.8.7

- Hierarchical Data Format library (from NCSA)
Maintained by: koziol@hdfgroup.org  Port Added: 24 Nov 2008 05:26:03
Also Listed In: archivers graphics
License: not specified in port
- hs-bio 0.5.0.1

- A Haskell bioinformatics library
Maintained by: haskell@FreeBSD.org  Port Added: 03 Jan 2010 05:02:40
Also Listed In: haskell
License: LGPL21
- ics 1.3.3_3

- Code_Saturne Graphical User Interface
Maintained by: thierry@FreeBSD.org  Port Added: 17 Jun 2007 21:06:27
License: not specified in port
- isaac-cfd 4.2_4

- Integrated Solution Algorithm for Arbitrary Configuration
There is no maintainer for this port. Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org  Port Added: 29 Dec 2004 20:53:20
License: not specified in port
- jmol 11.8.24

- An Open-Source Java Viewer for Chemical Structures in 3D
Maintained by: wen@FreeBSD.org  Port Added: 17 May 2008 23:04:58
Also Listed In: java
License: not specified in port
- jstrack 3.1.0

- A freeware hurricane tracking program
There is no maintainer for this port. Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org  Port Added: 29 Jun 2010 01:26:21
License: JStrack
- kalzium 4.7.4

- Periodic table of elements for KDE 4
Maintained by: kde@FreeBSD.org  Port Added: 17 Oct 2011 00:10:04
Also Listed In: kde
License: not specified in port
- kmovisto 0.7.0_7

- A real 3-D molecule viewer
There is no maintainer for this port. Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org  Port Added: 24 Oct 2003 04:23:06
License: not specified in port
- kst 1.9.1_4

- Data viewing program for KDE
There is no maintainer for this port. Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org  Port Added: 30 Apr 2004 15:45:13
Also Listed In: kde ipv6
License: not specified in port
- kst2 2.0.4

- Data viewing and plotting tool
Maintained by: makc@FreeBSD.org  Port Added: 23 Aug 2010 18:56:32
Also Listed In: kde
License: not specified in port
- lamprop 1.3.3

- Calculates properties of fiber reinforced composites
Maintained by: rsmith@xs4all.nl  Port Added: 15 May 2005 21:46:26
License: BSD
- latex-aa 6.1_3*

- LaTeX class for submission to "Astronomy and Astrophysics"
Maintained by: yokota@res.otaru-uc.ac.jp  Port Added: 16 Jun 2008 21:24:42
Also Listed In: print astro
License: not specified in port
- latex-aastex 5.2_3*

- LaTeX class for American Astronomical Society (AAS) journals
Maintained by: yokota@res.otaru-uc.ac.jp  Port Added: 16 Jun 2008 21:30:03
Also Listed In: print astro
License: not specified in port
- lensnns 2.63_1*

- Light Efficient Neural Network Simulator
Maintained by: jwbacon@tds.net  Port Added: 04 Jun 2007 21:16:31
Also Listed In: math
License: not specified in port
- libctl 3.1_1

- Control Language Library
Maintained by: devel@stasyan.com  Port Added: 04 Apr 2003 07:57:01
Also Listed In: math
License: not specified in port
- libghemical 2.99.1_2

- Support libraries of science/ghemical port
Maintained by: maho@FreeBSD.org  Port Added: 03 Jul 2006 08:09:17
License: not specified in port
- libint 1.1.4

- Evaluate the integrals in modern atomic and molecular theory
Maintained by: maho@FreeBSD.org  Port Added: 29 Dec 2006 11:50:35
License: not specified in port
- libkml 1.0.1

- Library for parse, generate and operate on KML
Maintained by: wen@FreeBSD.org  Port Added: 07 Oct 2009 11:11:59
License: not specified in port
- liblinear 1.80

- A library for Large Linear Classification
Maintained by: rafan@FreeBSD.org  Port Added: 28 Jul 2007 06:57:30
Also Listed In: math
License: BSD
- liboglappth 0.98_3

- Support libraries of science/ghemical port
Maintained by: maho@FreeBSD.org  Port Added: 20 Aug 2008 22:36:00
License: not specified in port
- libquantum 1.1.0

- C library for quantum computing and quantum simulation
Maintained by: wenheping@gmail.com  Port Added: 14 Aug 2009 20:02:38
License: not specified in port
- libsvm 3.10,1

- A library for Support Vector Machines
Maintained by: rafan@FreeBSD.org  Port Added: 19 Dec 2001 00:44:59
Also Listed In: math
License: BSD
- libsvm-python 3.10,1

- A library for Support Vector Machines
Maintained by: rafan@FreeBSD.org  Port Added: 11 Dec 2004 04:56:09
Also Listed In: math python
License: BSD
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| Latest Vulnerabilities |
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15 vulnerabilities affecting 34 ports have been reported in the past 14 days
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* - modified, not new All vulnerabilities
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