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Port details
R-cran-DCluster 0.2.6_6 science on this many watch lists=0 search for ports that depend on this port
Functions for the detection of spatial clusters of diseases
Maintained by: tota@FreeBSD.org search for ports maintained by this maintainer
Port Added: 18 Sep 2011 02:48:14
License: GPLv2 GPLv3


A set of functions for the detection of spatial clusters of disease
using count data. Bootstrap is used to estimate sampling distributions
of statistics.

WWW:	http://cran.r-project.org/web/packages/DCluster/
SVNWeb : Main Web Site : Distfiles Availability : PortsMon

NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.

Required To Build:
  1. math/R
Required To Run:
  1. math/R-cran-spdep
  2. math/R
There are no ports dependent upon this port

To install the port: cd /usr/ports/science/R-cran-DCluster/ && make install clean
To add the package: pkg install science/R-cran-DCluster


Configuration Options
     No options to configure

Master Sites:
  1. http://cran.cnr.berkeley.edu/src/contrib/
  2. http://cran.cnr.berkeley.edu/src/contrib/Archive/DCluster/
  3. http://cran.md.tsukuba.ac.jp/src/contrib/
  4. http://cran.md.tsukuba.ac.jp/src/contrib/Archive/DCluster/
  5. http://cran.ms.unimelb.edu.au/src/contrib/
  6. http://cran.ms.unimelb.edu.au/src/contrib/Archive/DCluster/
  7. http://cran.rakanu.com/src/contrib/
  8. http://cran.rakanu.com/src/contrib/Archive/DCluster/
  9. http://cran.stat.unipd.it/src/contrib/
  10. http://cran.stat.unipd.it/src/contrib/Archive/DCluster/
  11. http://cran.univ-lyon1.fr/src/contrib/
  12. http://cran.univ-lyon1.fr/src/contrib/Archive/DCluster/
  13. http://distcache.FreeBSD.org/ports-distfiles/
  14. http://ftp.ctex.org/mirrors/CRAN/src/contrib/
  15. http://ftp.ctex.org/mirrors/CRAN/src/contrib/Archive/DCluster/
  16. http://ftp5.gwdg.de/pub/misc/cran/src/contrib/
  17. http://ftp5.gwdg.de/pub/misc/cran/src/contrib/Archive/DCluster/
  18. http://mirror.its.dal.ca/cran/src/contrib/
  19. http://mirror.its.dal.ca/cran/src/contrib/Archive/DCluster/
  20. http://mirrors.dotsrc.org/cran/src/contrib/
  21. http://mirrors.dotsrc.org/cran/src/contrib/Archive/DCluster/
  22. http://mirrors.ibiblio.org/pub/mirrors/CRAN/src/contrib/
  23. http://mirrors.ibiblio.org/pub/mirrors/CRAN/src/contrib/Archive/DCluster/

Number of commits found: 20

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
10 Sep 2014 20:50:37
Original commit files touched by this commit  0.2.6_6
Revision:367888
gerald search for other commits by this committer
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
10 Mar 2014 20:55:22
Original commit files touched by this commit  0.2.6_5
Revision:347809
gerald search for other commits by this committer
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
28 Dec 2013 10:28:41
Original commit files touched by this commit  0.2.6_4
Revision:337846
dbn search for other commits by this committer
Convert Mk/bsd.cran.mk to the Uses framework.

PR:		ports/184699
Reviewed by:	bapt
Approved by:	portmgr (bdrewery), wen (maintainer, timeout > 2 weeks)
27 Nov 2013 18:56:44
Original commit files touched by this commit  0.2.6_4
Revision:335044
dbn search for other commits by this committer
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).

Since this patch converts all affected ports, bsd.cran.mk no longer supports
NO_STAGE and errors out if NO_STAGE is set.

Exp-run:	ports/184216
Reviewed by:	bdrewery
Approved by:	portsmgr, wen
13 Nov 2013 08:19:35
Original commit files touched by this commit  0.2.6_4
Revision:333659
bf search for other commits by this committer
Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;
adjust dependent ports

Reviewed by:	pfg, thierry, tota
26 Oct 2013 00:52:36
Original commit files touched by this commit  0.2.6_3
Revision:331644
gerald search for other commits by this committer
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
20 Sep 2013 22:48:31
Original commit files touched by this commit  0.2.6_2
Revision:327767
bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
science)
28 May 2013 15:15:06
Original commit files touched by this commit  0.2.6_2
Revision:319316
bf search for other commits by this committer
Update math/R to 3.0.1-patched, and adjust dependent ports;
synchronize math/rpy with upstream repository

Reviewed by:	wen
Approved by:	wen, tota
07 Mar 2013 04:21:35
Original commit files touched by this commit  0.2.6_1
Revision:313562
bf search for other commits by this committer
update math/R to 2.15.3, and adjust dependent ports
08 Jan 2013 12:39:31
Original commit files touched by this commit  0.2.6
Revision:310087
tota search for other commits by this committer
- Update to 0.2-6
04 Jan 2013 17:51:39
Original commit files touched by this commit  0.2.5_3
Revision:309935
bf search for other commits by this committer
update the R base ports to 2.15.2 and adjust dependent ports

Reviewed by:	thierry, tota, wen
26 Jun 2012 23:57:00
Original commit files touched by this commit  0.2.5_2
bf search for other commits by this committer
update math/R to 2.15.1, switch to the new options format, and
adjust dependent ports
04 May 2012 20:56:15
Original commit files touched by this commit  0.2.5_1
bf search for other commits by this committer
- update math/R-cran-psych to 1.2.1 [1]
- update math/R to 2.15.0, and adjust dependent ports
- minor changes to bsd.cran.mk [2]: rename MASTER_CRAN_SITES to
  MASTER_SITE_CRAN, as in bsd.sites.mk; make the install target more
  flexible and allow CRAN ports to override it; add a regression-test
  target; set USE_FORTRAN to match math/R; remove some of the
  redundant checks of USE_R_MOD; honor NOPORTDATA and NOPORTDOCS

Reviewed by:    thierry, tota, wen
Approved by:    D. Rue (maintainer) [1], wen [2]
05 Mar 2012 12:47:37
Original commit files touched by this commit  0.2.5
tota search for other commits by this committer
- Update to 0.2-5
- Fix LICENSE section
03 Mar 2012 16:59:36
Original commit files touched by this commit  0.2.3_4
bf search for other commits by this committer
update math/R to 2.14.2, and adjust dependent ports
18 Jan 2012 23:04:08
Original commit files touched by this commit  0.2.3_3
bf search for other commits by this committer
update math/R to 2.14.1, and adjust dependent ports
27 Nov 2011 07:02:15
Original commit files touched by this commit  0.2.3_2
bf search for other commits by this committer
update math/R to 2.14.0, math/R-cran-sp to 0.9-91, and adjust
dependent ports

Approved by:    linimon (portmgr), thierry, tota, wen
Feature safe:   yes
15 Nov 2011 20:09:02
Original commit files touched by this commit  0.2.3_1
tota search for other commits by this committer
- Move PKGNAMEPREFIX defined in each R-cran- related ports Makefile
  to Mk/bsd.cran.mk

PR:             ports/162238
Submitted by:   tota (myself)
Approved by:    wen (maintainer of Mk/bsd.cran.mk and many related ports),
                David Naylor <naylor_DOT_b_DOT_david_AT_gmail_DOT_com>
                  (maintainer of math/R-cran-RSvgDevice and math/R-cran-car),
                Dan Rue <drue_AT_therub_DOT_org>
                  (maintainer of math/R-cran-psych, timeout > 2 weeks)
Feature safe:   yes
11 Oct 2011 14:19:46
Original commit files touched by this commit  0.2.3_1
bf search for other commits by this committer
update math/R to 2.13.2, and adjust dependent ports
18 Sep 2011 02:47:50
Original commit files touched by this commit  0.2.3
tota search for other commits by this committer
- Add a new port: science/R-cran-DCluster

  A set of functions for the detection of spatial clusters of disease
  using count data. Bootstrap is used to estimate sampling distributions
  of statistics.

  WWW:  http://cran.r-project.org/web/packages/DCluster/

Number of commits found: 20

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