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non port: head/science/R-cran-Epi/Makefile
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Number of commits found: 23

Mon, 10 Mar 2014
[ 20:55 gerald ] Original commit 
347809 archivers/hs-tar/Makefile
347809 archivers/hs-zip-archive/Makefile
347809 archivers/hs-zlib-bindings/Makefile
347809 archivers/hs-zlib-conduit/Makefile
347809 archivers/hs-zlib-enum/Makefile
347809 archivers/hs-zlib/Makefile
347809 astro/R-cran-maptools/Makefile
347809 astro/astrometry/Makefile
347809 astro/nightfall/Makefile
347809 astro/py-RO/Makefile

(Only the first 10 of 1081 ports in this commit are shown above. View all ports for this commit)
Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
Sat, 28 Dec 2013
[ 10:28 dbn ] Original commit 
337846 Mk/Uses/cran.mk
337846 Mk/bsd.cran.mk
337846 Mk/bsd.port.mk
337846 astro/R-cran-maptools/Makefile
337846 converters/R-cran-RJSONIO/Makefile
337846 converters/R-cran-rjson/Makefile
337846 databases/R-cran-DBI/Makefile
337846 databases/R-cran-RMySQL/Makefile
337846 databases/R-cran-RSQLite.extfuns/Makefile
337846 databases/R-cran-RSQLite/Makefile

(Only the first 10 of 121 ports in this commit are shown above. View all ports for this commit)
Convert Mk/bsd.cran.mk to the Uses framework.

PR:		ports/184699
Reviewed by:	bapt
Approved by:	portmgr (bdrewery), wen (maintainer, timeout > 2 weeks)
Wed, 27 Nov 2013
[ 18:56 dbn ] Original commit 
335044 Mk/bsd.cran.mk
335044 astro/R-cran-maptools/Makefile
335044 converters/R-cran-RJSONIO/Makefile
335044 converters/R-cran-rjson/Makefile
335044 databases/R-cran-DBI/Makefile
335044 databases/R-cran-RMySQL/Makefile
335044 databases/R-cran-RSQLite.extfuns/Makefile
335044 databases/R-cran-RSQLite/Makefile
335044 databases/R-cran-sqldf/Makefile
335044 devel/R-cran-Defaults/Makefile

(Only the first 10 of 119 ports in this commit are shown above. View all ports for this commit)
Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).

Since this patch converts all affected ports, bsd.cran.mk no longer supports
NO_STAGE and errors out if NO_STAGE is set.

Exp-run:	ports/184216
Reviewed by:	bdrewery
Approved by:	portsmgr, wen
Wed, 13 Nov 2013
[ 08:19 bf ] Original commit 
333659 astro/R-cran-maptools/Makefile
333659 converters/R-cran-RJSONIO/Makefile
333659 converters/R-cran-rjson/Makefile
333659 databases/R-cran-DBI/Makefile
333659 databases/R-cran-RMySQL/Makefile
333659 databases/R-cran-RSQLite.extfuns/Makefile
333659 databases/R-cran-RSQLite/Makefile
333659 databases/R-cran-sqldf/Makefile
333659 devel/R-cran-Defaults/Makefile
333659 devel/R-cran-Hmisc/Makefile

(Only the first 10 of 130 ports in this commit are shown above. View all ports for this commit)
Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;
adjust dependent ports

Reviewed by:	pfg, thierry, tota
Sat, 26 Oct 2013
[ 00:52 gerald ] Original commit 
331644 archivers/hs-tar/Makefile
331644 archivers/hs-zip-archive/Makefile
331644 archivers/hs-zlib-bindings/Makefile
331644 archivers/hs-zlib-conduit/Makefile
331644 archivers/hs-zlib-enum/Makefile
331644 archivers/hs-zlib/Makefile
331644 astro/R-cran-maptools/Makefile
331644 astro/astrometry/Makefile
331644 astro/nightfall/Makefile
331644 astro/py-RO/Makefile

(Only the first 10 of 1147 ports in this commit are shown above. View all ports for this commit)
Update to libmpc version 1.0.1 which brings the following fixes:

 - Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
(Only the first 15 lines of the commit message are shown above View all of this commit message)
Fri, 20 Sep 2013
[ 22:48 bapt ] Original commit 
327767 science/2d-rewriter/Makefile
327767 science/2dhf/Makefile
327767 science/InsightToolkit/Makefile
327767 science/R-cran-AMORE/Makefile
327767 science/R-cran-DCluster/Makefile
327767 science/R-cran-Epi/Makefile
327767 science/R-cran-bayesm/Makefile
327767 science/R-cran-e1071/Makefile
327767 science/R-cran-eco/Makefile
327767 science/R-cran-epicalc/Makefile

(Only the first 10 of 185 ports in this commit are shown above. View all ports for this commit)
Add NO_STAGE all over the place in preparation for the staging support (cat:
science)
Tue, 28 May 2013
[ 15:15 bf ] Original commit 
319316 astro/R-cran-maptools/Makefile
319316 converters/R-cran-RJSONIO/Makefile
319316 converters/R-cran-rjson/Makefile
319316 databases/R-cran-DBI/Makefile
319316 databases/R-cran-RMySQL/Makefile
319316 databases/R-cran-RSQLite.extfuns/Makefile
319316 databases/R-cran-RSQLite/Makefile
319316 databases/R-cran-sqldf/Makefile
319316 devel/R-cran-Defaults/Makefile
319316 devel/R-cran-Hmisc/Makefile

(Only the first 10 of 140 ports in this commit are shown above. View all ports for this commit)
Update math/R to 3.0.1-patched, and adjust dependent ports;
synchronize math/rpy with upstream repository

Reviewed by:	wen
Approved by:	wen, tota
Sat, 18 May 2013
[ 22:32 tota ] Original commit 
318460 science/R-cran-Epi/Makefile
318460 science/R-cran-Epi/distinfo
- Update to 1.1.49
Thu, 7 Mar 2013
[ 04:21 bf ] Original commit 
313562 astro/R-cran-maptools/Makefile
313562 converters/R-cran-RJSONIO/Makefile
313562 converters/R-cran-rjson/Makefile
313562 databases/R-cran-DBI/Makefile
313562 databases/R-cran-RMySQL/Makefile
313562 databases/R-cran-RSQLite.extfuns/Makefile
313562 databases/R-cran-RSQLite/Makefile
313562 databases/R-cran-sqldf/Makefile
313562 devel/R-cran-Defaults/Makefile
313562 devel/R-cran-Hmisc/Makefile

(Only the first 10 of 116 ports in this commit are shown above. View all ports for this commit)
update math/R to 2.15.3, and adjust dependent ports
Sat, 9 Feb 2013
[ 01:30 tota ] Original commit 
311958 science/R-cran-Epi/Makefile
311958 science/R-cran-Epi/distinfo
- Update to 1.1.44
- Remove indefinite article from COMMENT
Fri, 4 Jan 2013
[ 17:51 bf ] Original commit 
309935 astro/R-cran-maptools/Makefile
309935 converters/R-cran-RJSONIO/Makefile
309935 converters/R-cran-rjson/Makefile
309935 databases/R-cran-DBI/Makefile
309935 databases/R-cran-RMySQL/Makefile
309935 databases/R-cran-RSQLite.extfuns/Makefile
309935 databases/R-cran-RSQLite/Makefile
309935 databases/R-cran-sqldf/Makefile
309935 devel/R-cran-Defaults/Makefile
309935 devel/R-cran-Hmisc/Makefile

(Only the first 10 of 116 ports in this commit are shown above. View all ports for this commit)
update the R base ports to 2.15.2 and adjust dependent ports

Reviewed by:	thierry, tota, wen
Tue, 6 Nov 2012
[ 22:51 tota ] Original commit 
307105 science/R-cran-Epi/Makefile
307105 science/R-cran-Epi/distinfo
307105 science/R-cran-Epi/pkg-descr
- Update to 1.1.40
- Convert to new Makefile header
- Trim WWW: line in pkg-descr

Feature safe:	yes
Sat, 30 Jun 2012
[ 03:31 tota ] Original commit 
1.11 science/R-cran-Epi/Makefile
1.4 science/R-cran-Epi/distinfo
- Update to 1.1.36
Tue, 26 Jun 2012
[ 23:57 bf ] Original commit 
1.10 astro/R-cran-maptools/Makefile
1.12 converters/R-cran-RJSONIO/Makefile
1.6 converters/R-cran-rjson/Makefile
1.8 databases/R-cran-DBI/Makefile
1.9 databases/R-cran-RMySQL/Makefile
1.3 devel/R-cran-Defaults/Makefile
1.8 devel/R-cran-bitops/Makefile
1.23 devel/R-cran-caret/Makefile
1.12 devel/R-cran-foreach/Makefile
1.10 devel/R-cran-iterators/Makefile

(Only the first 10 of 87 ports in this commit are shown above. View all ports for this commit)
update math/R to 2.15.1, switch to the new options format, and
adjust dependent ports
Fri, 4 May 2012
[ 20:56 bf ] Original commit 
1.12 Mk/bsd.cran.mk
1.9 astro/R-cran-maptools/Makefile
1.11 converters/R-cran-RJSONIO/Makefile
1.5 converters/R-cran-rjson/Makefile
1.7 databases/R-cran-DBI/Makefile
1.8 databases/R-cran-RMySQL/Makefile
1.2 devel/R-cran-Defaults/Makefile
1.7 devel/R-cran-bitops/Makefile
1.22 devel/R-cran-caret/Makefile
1.11 devel/R-cran-foreach/Makefile

(Only the first 10 of 89 ports in this commit are shown above. View all ports for this commit)
- update math/R-cran-psych to 1.2.1 [1]
- update math/R to 2.15.0, and adjust dependent ports
- minor changes to bsd.cran.mk [2]: rename MASTER_CRAN_SITES to
  MASTER_SITE_CRAN, as in bsd.sites.mk; make the install target more
  flexible and allow CRAN ports to override it; add a regression-test
  target; set USE_FORTRAN to match math/R; remove some of the
  redundant checks of USE_R_MOD; honor NOPORTDATA and NOPORTDOCS

Reviewed by:    thierry, tota, wen
Approved by:    D. Rue (maintainer) [1], wen [2]
Sat, 31 Mar 2012
[ 05:51 tota ] Original commit 
1.8 science/R-cran-Epi/Makefile
1.3 science/R-cran-Epi/distinfo
- Update to 1.1.34

Feature safe:   yes
Sat, 3 Mar 2012
[ 16:59 bf ] Original commit 
1.8 astro/R-cran-maptools/Makefile
1.10 converters/R-cran-RJSONIO/Makefile
1.2 converters/R-cran-rjson/Makefile
1.6 databases/R-cran-DBI/Makefile
1.7 databases/R-cran-RMySQL/Makefile
1.6 devel/R-cran-bitops/Makefile
1.20 devel/R-cran-caret/Makefile
1.7 devel/R-cran-foreach/Makefile
1.7 devel/R-cran-iterators/Makefile
1.6 devel/R-cran-itertools/Makefile

(Only the first 10 of 80 ports in this commit are shown above. View all ports for this commit)
update math/R to 2.14.2, and adjust dependent ports
Thu, 26 Jan 2012
[ 11:34 tota ] Original commit 
1.6 science/R-cran-Epi/Makefile
1.2 science/R-cran-Epi/distinfo
- Update to 1.1.33
- Add LICENSE
Wed, 18 Jan 2012
[ 23:04 bf ] Original commit 
1.6 astro/R-cran-maptools/Makefile
1.7 converters/R-cran-RJSONIO/Makefile
1.5 databases/R-cran-DBI/Makefile
1.5 databases/R-cran-RMySQL/Makefile
1.5 devel/R-cran-bitops/Makefile
1.16 devel/R-cran-caret/Makefile
1.6 devel/R-cran-foreach/Makefile
1.6 devel/R-cran-iterators/Makefile
1.5 devel/R-cran-itertools/Makefile
1.5 devel/R-cran-plyr/Makefile

(Only the first 10 of 58 ports in this commit are shown above. View all ports for this commit)
update math/R to 2.14.1, and adjust dependent ports
Sun, 27 Nov 2011
[ 07:02 bf ] Original commit 
1.4 astro/R-cran-maptools/Makefile
1.6 converters/R-cran-RJSONIO/Makefile
1.4 databases/R-cran-DBI/Makefile
1.4 databases/R-cran-RMySQL/Makefile
1.4 devel/R-cran-bitops/Makefile
1.13 devel/R-cran-caret/Makefile
1.4 devel/R-cran-foreach/Makefile
1.4 devel/R-cran-iterators/Makefile
1.4 devel/R-cran-itertools/Makefile
1.4 devel/R-cran-plyr/Makefile

(Only the first 10 of 62 ports in this commit are shown above. View all ports for this commit)
update math/R to 2.14.0, math/R-cran-sp to 0.9-91, and adjust
dependent ports

Approved by:    linimon (portmgr), thierry, tota, wen
Feature safe:   yes
Tue, 15 Nov 2011
[ 20:09 tota ] Original commit 
1.10 Mk/bsd.cran.mk
1.3 astro/R-cran-maptools/Makefile
1.5 converters/R-cran-RJSONIO/Makefile
1.3 databases/R-cran-DBI/Makefile
1.3 databases/R-cran-RMySQL/Makefile
1.3 devel/R-cran-bitops/Makefile
1.10 devel/R-cran-caret/Makefile
1.3 devel/R-cran-foreach/Makefile
1.3 devel/R-cran-iterators/Makefile
1.3 devel/R-cran-itertools/Makefile

(Only the first 10 of 49 ports in this commit are shown above. View all ports for this commit)
- Move PKGNAMEPREFIX defined in each R-cran- related ports Makefile
  to Mk/bsd.cran.mk

PR:             ports/162238
Submitted by:   tota (myself)
Approved by:    wen (maintainer of Mk/bsd.cran.mk and many related ports),
                David Naylor <naylor_DOT_b_DOT_david_AT_gmail_DOT_com>
                  (maintainer of math/R-cran-RSvgDevice and math/R-cran-car),
                Dan Rue <drue_AT_therub_DOT_org>
                  (maintainer of math/R-cran-psych, timeout > 2 weeks)
Feature safe:   yes
Tue, 11 Oct 2011
[ 14:19 bf ] Original commit 
1.2 astro/R-cran-maptools/Makefile
1.3 converters/R-cran-RJSONIO/Makefile
1.2 databases/R-cran-DBI/Makefile
1.2 databases/R-cran-RMySQL/Makefile
1.2 devel/R-cran-bitops/Makefile
1.6 devel/R-cran-caret/Makefile
1.2 devel/R-cran-foreach/Makefile
1.2 devel/R-cran-iterators/Makefile
1.2 devel/R-cran-itertools/Makefile
1.2 devel/R-cran-plyr/Makefile

(Only the first 10 of 58 ports in this commit are shown above. View all ports for this commit)
update math/R to 2.13.2, and adjust dependent ports
Sat, 17 Sep 2011
[ 06:55 tota ] Original commit 
1.221 science/Makefile
1.1 science/R-cran-Epi/Makefile
1.1 science/R-cran-Epi/distinfo
1.1 science/R-cran-Epi/pkg-descr
- Add a new port: science/R-cran-Epi

  Functions for demographic and epidemiological analysis in the Lexis
  diagram, i.e. register and cohort follow-up data, including interval
  censored data and representation of multistate data. Also some
  useful functions for tabulation and plotting. Contains some
  epidemiological datasets.

  WWW:  http://www.pubhealth.ku.dk/~bxc/Epi/

Number of commits found: 23

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