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non port: biology/avida/Makefile

Number of commits found: 60

Sunday, 31 Dec 2023
00:37 Muhammad Moinur Rahman (bofh) search for other commits by this committer
*/*: Sunset 12.4-RELEASE/12-STABLE from ports tree

- Remove all references to defunct ARCH arm
- Remove all references to defunct ARCH sparc64
- Remove x11-drivers/xf86-video-sunffb which requires defunct sparc64
  ARCH
- Remove sysutils/afbinit requires defunct sparc64 ARCH
- Remove all references to bktr driver
- Remove all references to defunct FreeBSD_12
- Remove all references to OSVERSION/OSREL corresponding to 12
- Remove conditionals in Mk/Uses/cabal.mk
- Remove sparc reference from Mk/Uses/qt-dist.mk
- Remove BROKEN_sparc64/NOT_FOR_ARCH=sparc64
- Remove BROKEN_FreeBSD_12* from:
- Remove OpenSSL patches from:
- Remove conditional flags for OSVERSION >= 1300000 to fixed flags.
  Also move conditional flags for non sparc64/arm ARCH to fixed flags.

Reviewed by:	brooks, jbeich, rene, salvadore
Differential Revision: https://reviews.freebsd.org/D42068
commit hash: bbab7f59e9630416397189df70ec133bdd690e38 commit hash: bbab7f59e9630416397189df70ec133bdd690e38 commit hash: bbab7f59e9630416397189df70ec133bdd690e38 commit hash: bbab7f59e9630416397189df70ec133bdd690e38 bbab7f5
Wednesday, 7 Sep 2022
21:10 Stefan E├čer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.

This commit implements such a proposal and moves one of the WWW: entries
of each pkg-descr file into the respective port's Makefile. A heuristic
attempts to identify the most relevant URL in case there is more than
one WWW: entry in some pkg-descr file. URLs that are not moved into the
Makefile are prefixed with "See also:" instead of "WWW:" in the pkg-descr
files in order to preserve them.

There are 1256 ports that had no WWW: entries in pkg-descr files. These
ports will not be touched in this commit.

The portlint port has been adjusted to expect a WWW entry in each port
Makefile, and to flag any remaining "WWW:" lines in pkg-descr files as
deprecated.

Approved by:		portmgr (tcberner)
commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 b7f0544
Wednesday, 20 Jul 2022
14:20 Tobias C. Berner (tcberner) search for other commits by this committer
biology: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  Aaron Dalton <aaron@FreeBSD.org>
  *  Akinori MUSHA aka knu <knu@idaemons.org>
  *  Andrey Zakhvatov
  *  Bob Zimmermann <rpz@cse.wustl.edu>
  *  Camson Huynh <chuynh@biolateral.com.au>
  *  Dan Siercks <dsiercks@uwm.edu>
  *  Fernan Aguero <fernan@iib.unsam.edu.ar>
  *  Hannes Hauswedell <h2+fbsdports@fsfe.org>
  *  J. Bacon <jwb@FreeBSD.org>
  *  Jason Bacon <jwb@FreeBSD.org>
  *  Jeremy <karlj000@unbc.ca>
  *  Johann Visagie <johann@egenetics.com>
  *  Johann Visagie <wjv@FreeBSD.org>
  *  Mauricio Herrera Cuadra <mauricio@arareko.net>
  *  Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp>
  *  Motomichi Matsuzaki <mzaki@e-mail.ne.jp>
  *  Motomichi Matsuzaki <mzaki@m.u-tokyo.ac.jp>
  *  Motomichi Matsuzaki <mzaki@niid.go.jp>
  *  Po-Chuan Hsieh <sunpoet@FreeBSD.org>
  *  Razi Khaja <razi@genet.sickkids.on.ca>
  *  Reed A. Cartwright <cartwright@asu.edu>
  *  Ryo MIYAMOTO
  *  Ryo MIYAMOTO <rmiya@cc.hirosaki-u.ac.jp>
  *  Sangwoo Shim <sangwoos@gmail.com>
  *  Sunpoet Po-Chuan Hsieh <sunpoet@FreeBSD.org>
  *  Tassilo Philipp <tphilipp@potion-studios.com>
  *  Tony Maher
  *  Tony Maher <tonym@biolateral.com.au>
  *  Wen Heping <wen@FreeBSD.org>
  *  Wen Heping <wenheping@gmail.com>
  *  Yonatan <onatan@gmail.com>
  *  Yuri Victorovich <yuri@rawbw.com>
  *  ballen
  *  barnhart@genetics.wustl.edu
  *  camson@bilateral.com.au
  *  chuynh@biolateral.com.au
  *  dbader@eece.unm.edu
  *  frankch@waru.life.nthu.edu.tw
  *  h2
  *  lentferj
  *  maho@FreeBSD.org
  *  mzaki@biol.s.u-tokyo.ac.jp
  *  tonym
  *  wen@FreeBSD.org

With hat:	portmgr
commit hash: 37526bbd4e50616d87f70e1c788ae4895d88d671 commit hash: 37526bbd4e50616d87f70e1c788ae4895d88d671 commit hash: 37526bbd4e50616d87f70e1c788ae4895d88d671 commit hash: 37526bbd4e50616d87f70e1c788ae4895d88d671 37526bb
Tuesday, 6 Apr 2021
14:31 Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
commit hash: 305f148f482daf30dcf728039d03d019f88344eb commit hash: 305f148f482daf30dcf728039d03d019f88344eb commit hash: 305f148f482daf30dcf728039d03d019f88344eb commit hash: 305f148f482daf30dcf728039d03d019f88344eb 305f148
Saturday, 2 Jan 2021
01:46 linimon search for other commits by this committer
For ports on riscv64 that fail the same (or similar ways) to aarch64, mark
them BROKEN.

While here, pet portlint (Makevar order).

Approved by:	portmgr (tier-2 blanket)
Original commitRevision:559904 
Wednesday, 23 Oct 2019
16:25 pkubaj search for other commits by this committer
biology/avida: unbreak on powerpc64

Builds fine with GCC 9.

Approved by:	mentors (implicit approval)
Original commitRevision:515272 
Tuesday, 25 Dec 2018
20:25 tcberner search for other commits by this committer
Change cmake default behaviour to outsource.

Ports that build out of source now simply can use "USES=cmake"
instead of "USES=cmake:outsource". Ports that fail to build
out of source now need to specify "USES=cmake:insource".

I tried to only set insource where explictely needed.

PR:		232038
Exp-run by:	antoine
Original commitRevision:488341 
Saturday, 25 Aug 2018
03:22 tobik search for other commits by this committer
biology/avida: Fix build with Clang 6

avida-core/source/main/cPopulation.cc:2916:20: error: no matching member
function for call to 'push_back'
   
track_founders.push_back(make_pair(organism->GetBioGroup("genotype")->GetID(),
new_genome.AsString()));
    ~~~~~~~~~~~~~~~^~~~~~~~~
/usr/include/c++/v1/vector:688:36: note: candidate function not viable: no known
conversion from 'pair<[...], typename __make_pair_return<cString>::type>' to
'const pair<[...], std::__1::basic_string<char>>' for 1st argument
    _LIBCPP_INLINE_VISIBILITY void push_back(const_reference __x);
                                   ^
/usr/include/c++/v1/vector:691:36: note: candidate function not viable: no known
conversion from 'pair<[...], typename __make_pair_return<cString>::type>' to
'pair<[...], std::__1::basic_string<char>>' for 1st argument
    _LIBCPP_INLINE_VISIBILITY void push_back(value_type&& __x);
                                   ^

http://beefy11.nyi.freebsd.org/data/head-i386-default/p477696_s338122/logs/errors/avida-2.12.4.log

libs/tcmalloc-1.4/src/sysinfo.cc:832:88: error: invalid suffix on literal; C++11
requires a space between literal and identifier
[-Wreserved-user-defined-literal]
                          "%08"PRIx64"-%08"PRIx64" %c%c%c%c %08"PRIx64"
%02x:%02x %-11"PRId64" %s\n",
                                                                                
      ^
Original commitRevision:477993 
Thursday, 21 Dec 2017
10:23 linimon search for other commits by this committer
Try to bring some consistency to ports that have x86-specific pieces.

 - in general, if we think that the code is not architecture-specific,
   and instead just enables x86 assembler by default, those should
   use BROKEN rather than IGNORE.  This will allow them to be attempted
   with TRYBROKEN.
 - spell i386 as x86.
 - spell asm as assembler.
 - pet portlint.

These changes should have no effect on tier-1 builds.

Approved by:	portmgr (tier-2 blanket)
Original commitRevision:456901 
Friday, 8 Dec 2017
05:20 linimon search for other commits by this committer
Revert previous fat-fingered commit.  These are the error messages from
benchmarks/libmicro.

Pointy hat to:	self
Approved by:	portmgr (tier-2 blanket)
Original commitRevision:455771 
05:05 linimon search for other commits by this committer
Update errror message on armvX.
Original commitRevision:455769 
Thursday, 30 Nov 2017
06:13 linimon search for other commits by this committer
For ports that are marked BROKEN on armv6, and also fail to build on
armv7, mark them so.

This is part two of a multipart commit to bring armv7 ports to parity
with armv6.

Approved by:	portmgr (tier-2 blanket)
Obtained from:	lonesome.com -exp run
Original commitRevision:455167 
Saturday, 13 May 2017
03:35 linimon search for other commits by this committer
Mark some ports failing on power64.  In cases where the error message
was a stub, provide a real one.

While here, pet portlint.

Approved by:	portmgr (tier-2 blanket)
Original commitRevision:440746 
Sunday, 26 Feb 2017
12:56 linimon search for other commits by this committer
Mark various ports as broken on armv6: invokes x86 asm.

Approved by:	portmgr (tier-2 blanket)
Original commitRevision:434867 
Saturday, 19 Nov 2016
14:56 marino search for other commits by this committer
biology/avida: Fix ncurses from ports support
Original commitRevision:426378 
Tuesday, 8 Nov 2016
19:29 linimon search for other commits by this committer
The 64-bit arm arch is actually spelled 'aarch64', not 'arm64'.
Original commitRevision:425758 
02:48 linimon search for other commits by this committer
Mark broken on the rest of the tier-2 archs: invokes x86 asm.
Original commitRevision:425664 
Sunday, 13 Dec 2015
16:07 swills search for other commits by this committer
mark some of the ports that don't build on powerpc64 for me
Original commitRevision:403676 
Wednesday, 2 Sep 2015
12:29 danfe search for other commits by this committer
- Unbreak on PowerPC by using atomicops implementation for Linux and GCC
  __sync_* functions family
- Remove BROKEN_ia64: it never had been first-class architecture, killed
  officially in -CURRENT for a while now
- Sanitize installation commands and sort the knobs while I am here
Original commitRevision:395830 
Wednesday, 19 Aug 2015
13:30 mat search for other commits by this committer
Convert ports to use the options helpers in categories [abc]*, and minor fixes.

Sponsored by:	Absolight
Differential Revision:	https://reviews.freebsd.org/D3412?
Original commitRevision:394778 
Saturday, 27 Jun 2015
14:29 bapt search for other commits by this committer
Use BROKEN helpers
Original commitRevision:390710 
Saturday, 20 Dec 2014
17:27 bapt search for other commits by this committer
Cleanup plist
Original commitRevision:375014 
Wednesday, 27 Nov 2013
16:07 jadawin search for other commits by this committer
- Fix build with clang
- Support STAGEDIR

PR:		ports/184242
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
Original commitRevision:335028 
Friday, 20 Sep 2013
15:55 bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Original commitRevision:327709 
Wednesday, 14 Aug 2013
22:35 ak search for other commits by this committer
- Remove MAKE_JOBS_SAFE variable

Approved by:	portmgr (bdrewery)
Original commitRevision:324744 
Monday, 6 May 2013
15:34 bapt search for other commits by this committer
Convert USE_NCURSES by USES=ncurses
Convert USE_READLINE by USES=readline
Original commitRevision:317525 
Friday, 22 Mar 2013
20:06 makc search for other commits by this committer
- convert USE_CMAKE to USES
- while here clean up some ports from CMAKE_VERBOSE, which is intended
  for users

Approved by:	portmgr (miwi)
Original commitRevision:314960 
Tuesday, 30 Oct 2012
17:53 pawel search for other commits by this committer
Update to version 2.12.4

PR:		ports/172218
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
Feature safe:	yes
Original commitRevision:306688 
Sunday, 17 Jun 2012
20:04 sylvio search for other commits by this committer
- Update to version 2.12.3

PR:             ports/168993
Submitted by:   KATO Tsuguru <tkato432@yahoo.com>
Original commit
Sunday, 3 Jun 2012
12:14 cs search for other commits by this committer
Set maintainership back to ports@
Original commit
Thursday, 15 Sep 2011
12:33 cs search for other commits by this committer
Change maintainer address to my FreeBSD address

Approved by:    wen@ (mentor)
Original commit
Friday, 17 Sep 2010
09:17 linimon search for other commits by this committer
Also broken on sparc64 (and, by implication, ia64).

Hat:            portmgr
Original commit
Saturday, 21 Aug 2010
00:28 sahil search for other commits by this committer
- Update to 2.10.0
- Add LICENSE
- Mark MAKE_JOBS_SAFE
- Eliminate unnecessary patch
- Note new homepage in pkg-descr
- Pass maintainership to submitter

PR:             ports/149827
Submitted by:   C-S <c-s@c-s.li>
Original commit
Thursday, 1 Apr 2010
05:16 linimon search for other commits by this committer
Mark various ports as broken or ignore on powerpc.

While here, remove remnants of alpha.
Original commit
Saturday, 22 Aug 2009
00:15 amdmi3 search for other commits by this committer
- Switch SourceForge ports to the new File Release System: categories starting
with B,C
Original commit
Tuesday, 24 Mar 2009
19:13 makc search for other commits by this committer
bump PORTREVISION after cmake update
Original commit
Thursday, 23 Oct 2008
14:13 amdmi3 search for other commits by this committer
- Update to 2.8.1

PR:             128057
Submitted by:   Christian Sturm <athaba at inode dot at>
Original commit
Wednesday, 3 Sep 2008
02:57 linimon search for other commits by this committer
Reset sf@slappy.org due to maintainer-timeouts and no response to email.

Hat:    portmgr
Original commit
Wednesday, 2 May 2007
07:13 edwin search for other commits by this committer
[patch] cleanup non-supported FreeBSD versions

PR:             ports/111724
Submitted by:   Edwin Groothuis <edwin@mavetju.org>
Approved by:    maintainer timeout
Original commit
Thursday, 10 Aug 2006
23:02 edwin search for other commits by this committer
Mark as broken for i386 4.x

PR:             ports/101789
Submitted by:   Scott Flatman <sf@slappy.org>
Original commit
Saturday, 8 Jul 2006
03:36 rafan search for other commits by this committer
- Update to 2.4.3
- Pass maintainersip to submitter

PR:             99901
Submitted by:   Scott Flatman <sf slappy.org>
Approved by:    delphij (mentor, implicit)
Original commit
Wednesday, 3 May 2006
23:26 edwin search for other commits by this committer
Remove USE_REINPLACE from all categories starting with B
Original commit
Tuesday, 12 Apr 2005
03:26 obrien search for other commits by this committer
At Kris's request, back out the MACHINE_ARCH spelling correction until
after 5.4-RELEASE.
Original commit
Monday, 11 Apr 2005
08:04 obrien search for other commits by this committer
Assist getting more ports working on AMD64 by obeying the
Ports Collection documentation and use 'ARCH' rather than 'MACHINE_ARCH'.
Original commit
Thursday, 23 Sep 2004
07:10 danfe search for other commits by this committer
The build should be fixed now, so remove BROKEN mark.

Approved by:    portmgr (marcus), fjoe (mentor, implicit)
Original commit
Friday, 17 Sep 2004
22:47 kris search for other commits by this committer
BROKEN on 5.x: Does not compile

Approved by:    portmgr (self)
Original commit
Friday, 21 May 2004
13:24 thierry search for other commits by this committer
Add forgotten patches...
Original commit
05:29 kris search for other commits by this committer
BROKEN: Broken pkg-plist
Original commit
Tuesday, 11 May 2004
05:40 thierry search for other commits by this committer
Add a missing BUILD_DEPENDS.

Reported by:    Kris.
Original commit
Monday, 10 May 2004
19:26 thierry search for other commits by this committer
Upgrade to 2.0b7 and unbreak.
Original commit
Sunday, 9 May 2004
11:04 markus search for other commits by this committer
Fix MASTER_SITES
Original commit
Saturday, 10 Apr 2004
17:26 trevor search for other commits by this committer
Tidy up whitespace.
Original commit
Sunday, 7 Mar 2004
00:18 linimon search for other commits by this committer
Maintainer reports being unable to look after this port any longer.
Thanks for your efforts in the past.
Original commit
Wednesday, 4 Feb 2004
05:21 marcus search for other commits by this committer
Bump PORTREVISION on all ports that depend on gettext to aid with upgrading.

(Part 2)
Original commit
Wednesday, 4 Jun 2003
22:43 kris search for other commits by this committer
Move inclusion of bsd.port.pre.mk later in the file for conditional BROKEN
tag.  Early inclusion caused problems for some ports, so to be safe I'm
updating all of them.

Pointy hat to:  kris
Original commit
Sunday, 18 May 2003
09:28 kris search for other commits by this committer
BROKEN on 5.1: bad C++
Original commit
Friday, 21 Feb 2003
11:01 knu search for other commits by this committer
De-pkg-comment.
Original commit
Sunday, 3 Nov 2002
23:40 edwin search for other commits by this committer
Make biology/avida building on -current again

PR:             ports/44819
Submitted by:   Oliver Lehmann <lehmann@ans-netz.de>
Approved by:    Jeremy Karlson <karlj000@unbc.ca>
Original commit
Thursday, 19 Sep 2002
02:45 kris search for other commits by this committer
BROKEN: Does not build
Original commit
Saturday, 20 Apr 2002
15:17 ijliao search for other commits by this committer
add avida 1.6.0
Avida is an auto-adaptive genetic system designed for ALife research

PR:             37268
Submitted by:   Jeremy Karlson <karlj000@unbc.ca>
Original commit

Number of commits found: 60