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non port: biology/biococoa/Makefile
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Number of commits found: 19

Wed, 26 Sep 2018
[ 15:23 brooks ] Original commit   Revision:480741
480741 Mk/Uses/objc.mk
480741 archivers/freetar/Makefile
480741 archivers/unarchiver/Makefile
480741 archivers/zipper/Makefile
480741 audio/cddb-bundle/Makefile
480741 audio/gnustep-cdplayer/Makefile
480741 audio/mpdcon/Makefile
480741 biology/biococoa/Makefile
480741 databases/fortytwo-bdb/Makefile
480741 databases/sqlclient/Makefile

(Only the first 10 of 102 ports in this commit are shown above. View all ports for this commit)
Update Objective-C LLVM version to 6.0.

Fixes aarch64 build.  Reduces depends on obsolete LLVM 4.0.

PR:		230116
Submitted by:	mikael.urankar@gmail.com
Approved by:	theraven (prior version)
Sponsored by:	DARPA, AFRL
Sun, 3 Dec 2017
[ 12:23 theraven ] Original commit   Revision:455401
455401 archivers/freetar/Makefile
455401 archivers/unarchiver/Makefile
455401 archivers/zipper/Makefile
455401 audio/cddb-bundle/Makefile
455401 audio/gnustep-cdplayer/Makefile
455401 audio/mpdcon/Makefile
455401 biology/biococoa/Makefile
455401 databases/fortytwo-bdb/Makefile
455401 databases/sqlclient/Makefile
455401 deskutils/affiche/Makefile

(Only the first 10 of 96 ports in this commit are shown above. View all ports for this commit)
Fix configure options for gnustep-make

We were not setting the flag to select the GNUstep ABI, so were defaulting to
using the GCC-compatible version, which was likely to trigger a lot of subtle
bugs.  This was noticed when C++ exceptions thrown through Objective-C stack
frames caused segfaults.
Fri, 13 Oct 2017
[ 11:14 bapt ] Original commit   Revision:451982
451982 biology/ariadne/Makefile
451982 biology/biococoa/Makefile
451982 biology/crux/Makefile
451982 biology/plink/Makefile
451982 biology/ssaha/Makefile
451982 biology/tRNAscan-SE/Makefile
Mark as broken ports with no public distfiles
Mon, 21 Aug 2017
[ 13:26 theraven ] Original commit   Revision:448472
448472 Mk/Uses/gnustep.mk
448472 Mk/Uses/objc.mk
448472 archivers/freetar/Makefile
448472 archivers/unarchiver/Makefile
448472 archivers/zipper/Makefile
448472 audio/cddb-bundle/Makefile
448472 audio/gnustep-cdplayer/Makefile
448472 audio/mpdcon/Makefile
448472 biology/biococoa/Makefile
448472 databases/fortytwo-bdb/Makefile

(Only the first 10 of 156 ports in this commit are shown above. View all ports for this commit)
Update GNUstep core libraries.

Update the default Objective-C compiler.

Fix various build failures in GNUstep ports from newer versions of the GNUstep
core libraries and from changes to GNUstep Make.

Update various ports that use GNUstep and bump the portrevision of the ones
that haven't had a new release.
Sat, 19 Sep 2015
[ 10:33 theraven ] Original commit   Revision:397315
397315 Mk/Uses/gnustep.mk
397315 archivers/freetar/Makefile
397315 archivers/freetar/pkg-plist
397315 archivers/zipper/Makefile
397315 archivers/zipper/pkg-plist
397315 audio/cddb-bundle/Makefile
397315 audio/cddb-bundle/pkg-plist
397315 audio/gnustep-cdplayer/Makefile
397315 audio/gnustep-cdplayer/pkg-plist
397315 audio/mpdcon/Makefile

(Only the first 10 of 159 ports in this commit are shown above. View all ports for this commit)
Make all GNUstep ports install into the System domain so that the Local domain
is available for stuff built from source.

Some ports were already installing in the System domain, for these just remove
the Makefile lines explicitly specifying the install domain.

The rest are installed in the Local domain, remove any overrides, update their
pkg-plists and any explicit paths in the Makefiles and then bump port revision.

Approved by:	bapt (mentor)
Differential Revision:	https://reviews.freebsd.org/D2977
Thu, 14 May 2015
[ 10:15 mat ] Original commit   Revision:386312
386312 Mk/bsd.sites.mk
386312 accessibility/py-atspi/Makefile
386312 accessibility/py3-atspi/Makefile
386312 archivers/dpkg/Makefile
386312 archivers/fastjar/Makefile
386312 archivers/gcpio/Makefile
386312 archivers/lbrate/Makefile
386312 archivers/lha-ac/Makefile
386312 archivers/macutils/Makefile
386312 archivers/mscompress/Makefile

(Only the first 10 of 1814 ports in this commit are shown above. View all ports for this commit)
MASTER_SITES cleanup.

- Replace ${MASTER_SITE_FOO} with FOO.
- Merge MASTER_SITE_SUBDIR into MASTER_SITES when possible. (This means 99.9%
  of the time.)
- Remove occurrences of MASTER_SITE_LOCAL when no subdirectory was present and
  no hint of what it should be was present.
- Fix some logic.
- And generally, make things more simple and easy to understand.

While there, add magic values to the FESTIVAL, GENTOO, GIMP, GNUPG, QT and
SAMBA macros.

Also, replace some EXTRACT_SUFX occurences with USES=tar:*.

Checked by:	make fetch-urlall-list
With hat:	portmgr
Sponsored by:	Absolight
Thu, 9 Apr 2015
[ 07:44 bapt ] Original commit   Revision:383626
383626 CHANGES
383626 MOVED
383626 Mk/Uses/gnustep.mk
383626 Mk/bsd.gnustep.mk
383626 archivers/freetar/Makefile
383626 archivers/zipper/Makefile
383626 audio/cddb-bundle/Makefile
383626 audio/gnustep-cdplayer/Makefile
383626 audio/mpdcon/Makefile
383626 biology/biococoa/Makefile

(Only the first 10 of 91 ports in this commit are shown above. View all ports for this commit)
Convert bsd.gnustep.mk to USES=gnustep

Simplify gnustep ports
Hook into the regular ports framework:
- LIB_DEPENDS for library dependencies
- Use regular USE_LDCONFIG

Reuse USES=objc (automatic)
USE_GNUSTEP is now a macro to set the dependencies and build feature needed.
Accepted arguments: back base build gui

Merge deskutils/preferencepanes into deskutils/systempreferences
Wed, 10 Sep 2014
[ 20:50 gerald ] Original commit   Revision:367888
367888 accessibility/accerciser/Makefile
367888 accessibility/jovie/Makefile
367888 accessibility/kaccessible/Makefile
367888 accessibility/kdeaccessibility4/Makefile
367888 accessibility/kmag/Makefile
367888 accessibility/kmousetool/Makefile
367888 accessibility/kmouth/Makefile
367888 accessibility/orca/Makefile
367888 arabic/kde4-l10n/Makefile
367888 arabic/libreoffice/Makefile

(Only the first 10 of 3171 ports in this commit are shown above. View all ports for this commit)
Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
Tue, 8 Oct 2013
[ 18:34 theraven ] Original commit   Revision:329819
329819 biology/biococoa/Makefile
329819 biology/biococoa/distinfo
329819 biology/biococoa/pkg-plist
Update BioCocoa to the latest release.

Approved by:	bapt (mentor)
Fri, 20 Sep 2013
[ 15:55 bapt ] Original commit   Revision:327709
327709 biology/ariadne/Makefile
327709 biology/artemis/Makefile
327709 biology/avida/Makefile
327709 biology/babel/Makefile
327709 biology/biococoa/Makefile
327709 biology/biojava/Makefile
327709 biology/blast/Makefile
327709 biology/blat/Makefile
327709 biology/boinc-simap/Makefile
327709 biology/chemeq/Makefile

(Only the first 10 of 94 ports in this commit are shown above. View all ports for this commit)
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Wed, 28 Aug 2013
[ 18:26 theraven (src committer) ] Original commit   Revision:325546
325546 MOVED
325546 Mk/bsd.gnustep.mk
325546 audio/mp3towav-bundle
325546 biology/adun
325546 biology/biococoa/Makefile
325546 biology/biococoa/distinfo
325546 biology/biococoa/pkg-plist
325546 databases/gdl2
325546 databases/mylibrary
325546 deskutils/mywiki

(Only the first 10 of 76 ports in this commit are shown above. View all ports for this commit)
Update to latest GNUstep core libraries.
Update dependent packages with more recent releases.
Remove old and bit-rotted ones.
Switch to using clang 3.3 and libobjc2 1.7 by default, so modern Objective-C
features work out of the box and remove a lot of configurable options for
sub-optimal (and, often, unsupported / deprecated upstream) configurations.
Take maintainership of GNUstep-related ports.

Several of the ports left in have scary warnings which mean that they are likely
broken in lots of cases.  Future commits will fix them.

Approved by:	bapt
Sat, 13 Oct 2012
[ 13:39 dinoex ] Original commit   Revision:305832
305832 archivers/freetar/Makefile
305832 archivers/lha-ac/Makefile
305832 archivers/rubygem-archive-tar-minitar/Makefile
305832 astro/position/Makefile
305832 audio/cddb-bundle/Makefile
305832 audio/gnustep-cdplayer/Makefile
305832 audio/mp3towav-bundle/Makefile
305832 audio/mpdcon/Makefile
305832 benchmarks/gsbench/Makefile
305832 biology/biococoa/Makefile

(Only the first 10 of 174 ports in this commit are shown above. View all ports for this commit)
- cleanup comments
Feature safe: yes
Tue, 26 Jun 2012
[ 05:43 dinoex ] Original commit 
1.7 archivers/freetar/Makefile
1.14 archivers/zipper/Makefile
1.13 astro/position/Makefile
1.11 audio/cddb-bundle/Makefile
1.23 audio/cynthiune/Makefile
1.14 audio/gnustep-cdplayer/Makefile
1.11 audio/mp3towav-bundle/Makefile
1.9 audio/mpdcon/Makefile
1.14 audio/volumecontrol.app/Makefile
1.9 benchmarks/gsbench/Makefile

(Only the first 10 of 122 ports in this commit are shown above. View all ports for this commit)
- reset MAINTAINER
Sat, 5 Jun 2010
[ 06:14 dinoex ] Original commit 
1.15 audio/mp3gain/Makefile
1.6 biology/biococoa/Makefile
1.8 databases/fortytwo-bdb/Makefile
1.11 databases/sqlclient/Makefile
1.13 deskutils/etoile-systemconfig/Makefile
1.9 devel/fortytwo-encore/Makefile
1.10 devel/objectivelib/Makefile
1.8 graphics/fortytwo/Makefile
1.11 graphics/photoclip/Makefile
1.11 mail/addresses-goodies/Makefile

(Only the first 10 of 19 ports in this commit are shown above. View all ports for this commit)
LICENSE LGPL21
Sun, 30 May 2010
[ 12:28 dinoex ] Original commit 
1.5 archivers/freetar/Makefile
1.3 archivers/freetar/pkg-plist
1.11 archivers/zipper/Makefile
1.4 archivers/zipper/pkg-plist
1.9 astro/position/Makefile
1.3 astro/position/pkg-plist
1.8 audio/cddb-bundle/Makefile
1.2 audio/cddb-bundle/pkg-plist
1.19 audio/cynthiune/Makefile
1.5 audio/cynthiune/pkg-plist

(Only the first 10 of 371 ports in this commit are shown above. View all ports for this commit)
- drop USE_GNUSTEP_PREFIX
Fri, 6 Jun 2008
[ 13:08 edwin ] Original commit 
1.26 biology/L-Breeder/Makefile
1.16 biology/adun/Makefile
1.11 biology/artemis/Makefile
1.4 biology/biococoa/Makefile
1.16 biology/biojava/Makefile
1.8 biology/boinc-simap/Makefile
1.10 biology/gff2ps/Makefile
1.33 biology/gperiodic/Makefile
1.3 biology/jalview/Makefile
1.16 biology/lsysexp/Makefile

(Only the first 10 of 13 ports in this commit are shown above. View all ports for this commit)
Bump portrevision due to upgrade of devel/gettext.

The affected ports are the ones with gettext as a run-dependency
according to ports/INDEX-7 (5007 of them) and the ones with USE_GETTEXT
in Makefile (29 of them).

PR:             ports/124340
Submitted by:   edwin@
Approved by:    portmgr (pav)
Sat, 19 May 2007
[ 20:32 flz ] Original commit 
1.1364 MOVED
1.566 Mk/bsd.port.mk
1.1 Mk/bsd.xorg.mk
1.1 Tools/scripts/mergebase.sh
1.502 UPDATING
1.2 accessibility/at-poke/Makefile
1.60 accessibility/at-spi/Makefile
1.29 accessibility/at-spi/pkg-plist
1.51 accessibility/atk/Makefile
1.27 accessibility/atk/pkg-plist

(Only the first 10 of 7868 ports in this commit are shown above. View all ports for this commit)
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
Wed, 31 Jan 2007
[ 18:18 dinoex ] Original commit 
1.2 archivers/freetar/Makefile
1.5 archivers/zipper/Makefile
1.3 astro/position/Makefile
1.3 audio/cddb-bundle/Makefile
1.4 audio/cynthiune/Makefile
1.3 audio/gnustep-cdplayer/Makefile
1.2 audio/mp3towav-bundle/Makefile
1.3 audio/mpdcon/Makefile
1.5 audio/volumecontrol.app/Makefile
1.3 benchmarks/gsbench/Makefile

(Only the first 10 of 160 ports in this commit are shown above. View all ports for this commit)
- add category gnustep
PR:             103931
Approved by:    pav
Sat, 30 Dec 2006
[ 09:20 dinoex ] Original commit 
1.90 biology/Makefile
1.1 biology/biococoa/Makefile
1.1 biology/biococoa/distinfo
1.1 biology/biococoa/pkg-descr
1.1 biology/biococoa/pkg-plist
The BioCocoa framework provides developers with the opportunity to add
support for reading and writing BEAST, Clustal, EMBL, Fasta, GCG-MSF, GDE,
Hennig86, NCBI, NEXUS, NONA, PDB, Phylip, PIR, Plain/Raw, Swiss-Prot and
TNT files by writing only three lines of code.
The framework is written in Cocoa (Objective-C).

WWW: http://bioinformatics.org/biococoa/

Number of commits found: 19

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