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non port: biology/canu/Makefile
SVNWeb

Number of commits found: 29

Wed, 7 Sep 2022
[ 21:10 Stefan Eßer (se) search for other commits by this committer ]    commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52  commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52  commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52  b7f0544  (Only the first 10 of 27931 ports in this commit are shown above. View all ports for this commit)
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
Fri, 12 Aug 2022
[ 14:46 Dima Panov (fluffy) search for other commits by this committer ]    commit hash:4cf39decb348615b9c8a28370d987a85d1b8a5ed  commit hash:4cf39decb348615b9c8a28370d987a85d1b8a5ed  commit hash:4cf39decb348615b9c8a28370d987a85d1b8a5ed  4cf39de  (Only the first 10 of 722 ports in this commit are shown above. View all ports for this commit)
*/*: bump all consumers after recent boost upgrade
Sun, 22 May 2022
[ 20:17 Dima Panov (fluffy) search for other commits by this committer ]    commit hash:b082b3d13e8c4872b73fb681eb99b261926ac9cd  commit hash:b082b3d13e8c4872b73fb681eb99b261926ac9cd  commit hash:b082b3d13e8c4872b73fb681eb99b261926ac9cd  b082b3d  (Only the first 10 of 280 ports in this commit are shown above. View all ports for this commit)
devel/boost-all: bump all library consumers after boost upgrade

PR:	246106
Mon, 20 Dec 2021
[ 12:59 Antoine Brodin (antoine) search for other commits by this committer ]    commit hash:b2dab386316742576c3fc3fd7a3ed0284c919683  commit hash:b2dab386316742576c3fc3fd7a3ed0284c919683  commit hash:b2dab386316742576c3fc3fd7a3ed0284c919683  b2dab38 
biology/canu: fix CATEGORIES
Sun, 19 Dec 2021
[ 21:06 Jason W. Bacon (jwb) search for other commits by this committer ]    commit hash:b9105b7ef1e91bce177273f3031a98781ca6faf7  commit hash:b9105b7ef1e91bce177273f3031a98781ca6faf7  commit hash:b9105b7ef1e91bce177273f3031a98781ca6faf7  b9105b7  (Only the first 10 of 11 ports in this commit are shown above. View all ports for this commit)
biology/canu: Update to 2.2

FreeBSD port: Add support for aarch64 and powerpc64 using simde
Not yet supported upstream

Several upstream bug fixes and minor enhancements since 2.1

Changes: https://github.com/marbl/canu/tags
Wed, 7 Apr 2021
[ 08:09 Mathieu Arnold (mat) search for other commits by this committer ]    commit hash:cf118ccf875508b9a1c570044c93cfcc82bd455c  commit hash:cf118ccf875508b9a1c570044c93cfcc82bd455c  commit hash:cf118ccf875508b9a1c570044c93cfcc82bd455c  cf118cc  (Only the first 10 of 8873 ports in this commit are shown above. View all ports for this commit)
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
Tue, 6 Apr 2021
[ 14:31 Mathieu Arnold (mat) search for other commits by this committer ]    commit hash:305f148f482daf30dcf728039d03d019f88344eb  commit hash:305f148f482daf30dcf728039d03d019f88344eb  commit hash:305f148f482daf30dcf728039d03d019f88344eb  305f148  (Only the first 10 of 29333 ports in this commit are shown above. View all ports for this commit)
Remove # $FreeBSD$ from Makefiles.
Mon, 11 Jan 2021
[ 16:51 jwb search for other commits by this committer ] Original commit   Revision:561227
biology/canu: Drop dependency on gcc

Replace compiler:openmp with compiler:c++11-lang and localbase

PR:             port/247753, ports/252379
Mon, 14 Sep 2020
[ 22:27 jwb search for other commits by this committer ] Original commit   Revision:548685
biology/canu: Upgrade to 2.1

Numerous functional improvements for ease of use and output quality
A few bug fixes

Reported by:    portscout
Sun, 17 May 2020
[ 02:25 linimon search for other commits by this committer ] Original commit   Revision:535507
Mark as BROKEN on powerpc64:

  utgcns/libboost/boost/smart_ptr/detail/sp_counted_impl.hpp:81:5: error:
'get_deleter' declared as a 'virtual' field

This may have something to do with compiler:openmp in USES.  However,
it has broken for more than 6 months at this point.

Approved by:	portmgr (tier-2 blanket)
Fri, 20 Mar 2020
[ 18:14 jwb search for other commits by this committer ] Original commit   Revision:528792
biology/canu: Upgrade to 2.0

Several routine enhancements and bug fixes

Reported by:    portscout
Wed, 11 Dec 2019
[ 17:53 jbeich search for other commits by this committer ] Original commit   Revision:519824 (Only the first 10 of 417 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.72.0

Changes:	http://www.boost.org/users/history/version_1_72_0.html
PR:		241449
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D22136
Fri, 8 Nov 2019
[ 14:03 jwb search for other commits by this committer ] Original commit   Revision:517066
biology/canu: Upgrade to 1.9

Numerous bug fixes and enhancements

Reported by:    portscout
Mon, 19 Aug 2019
[ 15:35 jbeich search for other commits by this committer ] Original commit   Revision:509290 (Only the first 10 of 412 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.71.0

Changes:	http://www.boost.org/users/history/version_1_71_0.html
PR:		238827
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D20774
Fri, 26 Jul 2019
[ 20:46 gerald search for other commits by this committer ] Original commit   Revision:507372 (Only the first 10 of 3853 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
Thu, 18 Apr 2019
[ 12:15 jwb search for other commits by this committer ] Original commit   Revision:499251
biology/canu: Fix build on powerpc64 and aarch64

Should also work on powerpc and arm*, but unable to test

PR:             237105
Reported by:    pkubaj
Fri, 12 Apr 2019
[ 06:36 jbeich search for other commits by this committer ] Original commit   Revision:498698 (Only the first 10 of 392 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.70.0

Changes:	http://www.boost.org/users/history/version_1_70_0.html
PR:		235956
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D19303
Wed, 12 Dec 2018
[ 01:35 gerald search for other commits by this committer ] Original commit   Revision:487272 (Only the first 10 of 3168 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
[ 00:15 jbeich search for other commits by this committer ] Original commit   Revision:487266 (Only the first 10 of 415 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.69.0

Changes:	http://www.boost.org/users/history/version_1_69_0.html
PR:		232525
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D17645
Sun, 4 Nov 2018
[ 14:29 jwb search for other commits by this committer ] Original commit   Revision:484077
biology/canu: Upgrade to 1.8, add experimental SLURM integration

Solves build issue with gcc8.

PR:             232930
Reported by:    gerald
Approved by:    jrm (mentor, implicit)
Thu, 9 Aug 2018
[ 06:58 jbeich search for other commits by this committer ] Original commit   Revision:476723 (Only the first 10 of 404 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.68.0

- Switch to C++14 for libboost_system to support C++14 consumers

Changes:	http://www.boost.org/users/history/version_1_68_0.html
PR:		229569
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D16165
Sun, 29 Jul 2018
[ 22:18 gerald search for other commits by this committer ] Original commit   Revision:475857 (Only the first 10 of 1480 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
in the ports tree (via Mk/bsd.default-versions.mk and lang/gcc) which
has now moved from GCC 6 to GCC 7 by default.

This includes ports
 - featuring USE_GCC=yes or USE_GCC=any,
 - featuring USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and those
 - with USES=compiler specifying one of openmp, nestedfct, c11, c++0x,
   c++11-lib, c++11-lang, c++14-lang, c++17-lang, or gcc-c++11-lib.

PR:		222542
Thu, 21 Jun 2018
[ 23:52 linimon search for other commits by this committer ] Original commit   Revision:473009 (Only the first 10 of 19 ports in this commit are shown above. View all ports for this commit)
Mark as broken on aarch64, and, where appropriate, armvX.

While here, pet portlint.

Approved by:	portmgr (tier-2 blanket)
Thu, 26 Apr 2018
[ 04:16 jwb search for other commits by this committer ] Original commit   Revision:468321
biology/canu: Upgrade to 1.7 release

Approved by:    jrm (mentor)
Differential Revision:  https://reviews.freebsd.org/D15201
Wed, 18 Apr 2018
[ 13:57 jbeich search for other commits by this committer ] Original commit   Revision:467711 (Only the first 10 of 388 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.67.0

Changes:	http://www.boost.org/users/history/version_1_67_0.html
PR:		227427
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D15030
Sat, 10 Mar 2018
[ 17:46 gerald search for other commits by this committer ] Original commit   Revision:464084 (Only the first 10 of 1104 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISIONs of all users of math/mpc that we just updated to
version 1.1.0 (via revision 464079).
Thu, 18 Jan 2018
[ 04:11 jbeich search for other commits by this committer ] Original commit   Revision:459315 (Only the first 10 of 356 ports in this commit are shown above. View all ports for this commit)
devel/boost-*: update to 1.66.0

Changes:	http://www.boost.org/users/history/version_1_66_0.html
PR:		223922
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D13279
Fri, 22 Dec 2017
[ 14:14 jwb search for other commits by this committer ] Original commit   Revision:456982
biology/canu: Replace += with = for depends

Approved by:    jrm
Differential Revision:  https://reviews.freebsd.org/D13574
[ 01:30 jwb search for other commits by this committer ] Original commit   Revision:456950
[new port] biology/canu: Single molecule sequence assembler

Approved by: jrm (mentor) or wen (mentor)
Differential Revision:  https://reviews.freebsd.org/D13574

Number of commits found: 29