| Port details |
- coalesce A program to fit population models
- 1.50 biology
 =0      1.50Version of this port present on the latest quarterly branch.  DEPRECATED: distfile disappeared from homepage
 This port expired on: 2007-01-07
- There is no maintainer for this port.
- Any concerns regarding this port should be directed to the FreeBSD Ports mailing list via ports@FreeBSD.org
- Port Added: 2001-08-06 11:41:58
- Last Update: 2007-01-25 11:25:40
- SVN Revision: UNKNOWN
- License: not specified in port
- Description:
- Coalesce fits the model which has a single population of constant size, and
estimates 4Nu, where N is the effective population size and u is the neutral
mutation rate per site
Coalesce forms part of the Lamarc (Likelihood Analysis with Metropolis
Algorithm using Random Coalescence) suite. See:
http://evolution.genetics.washington.edu/lamarc.html
WWW: http://evolution.genetics.washington.edu/lamarc/recombine.html
-- Johann Visagie <wjv@FreeBSD.org>
 cgit ¦ GitHub ¦ GitHub ¦ GitLab ¦  - pkg-plist: as obtained via:
make generate-plist - There is no configure plist information for this port.
- Dependency lines:
-
- coalesce>0:biology/coalesce
- No installation instructions:
- This port has been deleted.
- PKGNAME: coalesce
- Flavors: there is no flavor information for this port.
- distinfo:
- There is no distinfo for this port.
No package information for this port in our database- Sometimes this happens. Not all ports have packages.
- This port has no dependencies.
- There are no ports dependent upon this port
Configuration Options:- No options to configure
- Options name:
- N/A
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
|
Number of commits found: 9
| Commit History - (may be incomplete: for full details, see links to repositories near top of page) |
| Commit | Credits | Log message |
|---|
1.50
25 Jan 2007 11:25:40
  |
vd |
Remove expired leaf port:
2007-01-07 biology/coalesce: distfile disappeared from homepage
Actually the software is still available at:
http://evolution.gs.washington.edu/lamarc/coalesce.html, but it is
not supported by the authors. Last version is from 1995 and
biology/fluctuate can be used instead. |
1.50
10 Dec 2006 12:36:54
|
gabor |
- Deprecate
- Set EXPIRATION_DATE
Approved by: erwin (mentor) |
1.50
24 Nov 2005 00:04:00
|
pav |
- Add SHA256 |
1.50
18 Feb 2005 12:58:07
|
krion |
Fix unfetchable tarball, it was renamed and relocated on original
server.
PR: ports/77674
Submitted by: Sam Lawrance <boris at brooknet.com.au> |
1.50
20 Nov 2004 08:09:49
|
linimon |
With portmgr hat on, reset inactive maintainer. These ports are now up
for adoption. |
1.50
31 Mar 2004 03:12:58
|
trevor |
SIZEify (maintainer timeout) |
1.50
22 Oct 2003 09:29:55
|
osa |
Cosmetic fix: use %%DOCSDIR%% macro.
No functionally changes.
Submitted by: Oleg Karachevtsev <ok@etrust.ru>
A part of PR: 57992 |
1.50
07 Mar 2003 05:56:43
|
ade |
Clear moonlight beckons.
Requiem mors pacem pkg-comment,
And be calm ports tree.
E Nomini Patri, E Fili, E Spiritu Sancti. |
06 Aug 2001 15:41:58
    |
wjv |
Add coalesce 1.50, a program to fit population models. |
Number of commits found: 9
|
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