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Port details
fastahack Utility for indexing and sequence extraction from FASTA files
g20160702 biology on this many watch lists=1 search for ports that depend on this port Find issues related to this port Report an issue related to this port
Maintainer: jwb@FreeBSD.org search for ports maintained by this maintainer
Port Added: 16 Apr 2018 14:50:59
License: GPLv2
Fastahack is a small application for indexing and extracting sequences and
subsequences from FASTA files.  The included Fasta.cpp library provides a FASTA
reader and indexer that can be embedded into applications which would benefit
from directly reading subsequences from FASTA files.  The library automatically
handles index file generation and use.

WWW: https://github.com/ekg/fastahack
SVNWeb : Homepage : PortsMon
    Pseudo-pkg-plist information, but much better, from make generate-plist
    Expand this list (10 items)
  1. /usr/local/share/licenses/fastahack-g20160702/catalog.mk
  2. /usr/local/share/licenses/fastahack-g20160702/LICENSE
  3. /usr/local/share/licenses/fastahack-g20160702/GPLv2
  4. bin/fastahack
  5. include/fastahack/Fasta.h
  6. include/fastahack/LargeFileSupport.h
  7. include/fastahack/Region.h
  8. include/fastahack/disorder.h
  9. include/fastahack/split.h
  10. lib/libfastahack.a
  11. Collapse this list.

To install the port: cd /usr/ports/biology/fastahack/ && make install clean
To add the package: pkg install fastahack

PKGNAME: fastahack

distinfo:

TIMESTAMP = 1523600462
SHA256 (ekg-fastahack-g20160702-bbc645f2f7966cb7b44446200c02627c3168b399_GH0.tar.gz) = dc8ef61765b7720fd2d163143696f1c82251bfd906ac5261642e7230d81d5da6
SIZE (ekg-fastahack-g20160702-bbc645f2f7966cb7b44446200c02627c3168b399_GH0.tar.gz) = 18200

This port is required by:

for Build for Run * - deleted ports are only shown under the This port is required by section. It was harder to do for the Required section. Perhaps later...
Configuration Options
     No options to configure

Master Sites:
  1. https://codeload.github.com/ekg/fastahack/tar.gz/bbc645f2f7966cb7b44446200c02627c3168b399?dummy=/

Number of commits found: 1

Commit History - (may be incomplete: see SVNWeb link above for full details)
DateByDescription
16 Apr 2018 14:50:46
Original commit files touched by this commit  g20160702
Revision:467485
jwb search for other commits by this committer
biology/fastahack: Utility for indexing and sequence extraction from FASTA files

Approved by:    jrm (mentor)
Differential Revision:  https://reviews.freebsd.org/D15080

Number of commits found: 1

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