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non port: biology/freebayes/Makefile
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Number of commits found: 16

Sun, 22 Jan 2023
[ 16:42 Jason W. Bacon (jwb) search for other commits by this committer ]    commit hash:b0cafd4b1d5be5c256717eae0062ca28a50d5f79  commit hash:b0cafd4b1d5be5c256717eae0062ca28a50d5f79  commit hash:b0cafd4b1d5be5c256717eae0062ca28a50d5f79  b0cafd4 
biology/freebayes: Drop redundant tabixpp dep

tabixpp is included as a git submodule
Fri, 6 Jan 2023
[ 01:22 Jason W. Bacon (jwb) search for other commits by this committer ]    commit hash:fea5f773c7b493dda2861fffa734fcf8e0612145  commit hash:fea5f773c7b493dda2861fffa734fcf8e0612145  commit hash:fea5f773c7b493dda2861fffa734fcf8e0612145  fea5f77 
biology/freebayes: Bump PORTREVISION for biology/htslib update
Wed, 7 Sep 2022
[ 21:10 Stefan Eßer (se) search for other commits by this committer ]    commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52  commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52  commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52  b7f0544  (Only the first 10 of 27931 ports in this commit are shown above. View all ports for this commit)
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
Sun, 6 Feb 2022
[ 20:23 Jason W. Bacon (jwb) search for other commits by this committer ]    commit hash:09167ae22b6631ec9a9d52fb66c3b177976d4c2c  commit hash:09167ae22b6631ec9a9d52fb66c3b177976d4c2c  commit hash:09167ae22b6631ec9a9d52fb66c3b177976d4c2c  09167ae 
biology/freebayes: Update to 1.3.6

Minor dependency updates, but mostly build system improvements
Changes:        https://github.com/freebayes/freebayes/tags

Reported by:    portscout
Fri, 17 Dec 2021
[ 13:26 Piotr Kubaj (pkubaj) search for other commits by this committer ]    commit hash:b473e2091d12c0a210f4ad91580bb2b5ed779700  commit hash:b473e2091d12c0a210f4ad91580bb2b5ed779700  commit hash:b473e2091d12c0a210f4ad91580bb2b5ed779700  b473e20 
biology/freebayes: enable on riscv64
Fri, 5 Nov 2021
[ 01:14 Piotr Kubaj (pkubaj) search for other commits by this committer ]    commit hash:0e5026aa1ecfd8af00d8e881b3f3d0b013afb8e6  commit hash:0e5026aa1ecfd8af00d8e881b3f3d0b013afb8e6  commit hash:0e5026aa1ecfd8af00d8e881b3f3d0b013afb8e6  0e5026a 
biology/freebayes: builds fine on armv7
Wed, 3 Nov 2021
[ 20:49 Jason W. Bacon (jwb) search for other commits by this committer ]    commit hash:dc64b13129b889531be2dae60218484f9444cf92  commit hash:dc64b13129b889531be2dae60218484f9444cf92  commit hash:dc64b13129b889531be2dae60218484f9444cf92  dc64b13  (Only the first 10 of 13 ports in this commit are shown above. View all ports for this commit)
biology/freebayes: Update to 1.3.5

Fixes build on powerpc64 and aarch64, possibly others.

Changes:        https://github.com/freebayes/freebayes/tags

PR:             259627
Reported by:    pkubaj
Wed, 7 Apr 2021
[ 08:09 Mathieu Arnold (mat) search for other commits by this committer ]    commit hash:cf118ccf875508b9a1c570044c93cfcc82bd455c  commit hash:cf118ccf875508b9a1c570044c93cfcc82bd455c  commit hash:cf118ccf875508b9a1c570044c93cfcc82bd455c  cf118cc  (Only the first 10 of 8873 ports in this commit are shown above. View all ports for this commit)
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
Tue, 6 Apr 2021
[ 14:31 Mathieu Arnold (mat) search for other commits by this committer ]    commit hash:305f148f482daf30dcf728039d03d019f88344eb  commit hash:305f148f482daf30dcf728039d03d019f88344eb  commit hash:305f148f482daf30dcf728039d03d019f88344eb  305f148  (Only the first 10 of 29333 ports in this commit are shown above. View all ports for this commit)
Remove # $FreeBSD$ from Makefiles.
Sat, 2 Jan 2021
[ 01:46 linimon search for other commits by this committer ] Original commit   Revision:559904 (Only the first 10 of 34 ports in this commit are shown above. View all ports for this commit)
For ports on riscv64 that fail the same (or similar ways) to aarch64, mark
them BROKEN.

While here, pet portlint (Makevar order).

Approved by:	portmgr (tier-2 blanket)
Mon, 21 Sep 2020
[ 18:14 se search for other commits by this committer ] Original commit   Revision:549476
Fix build with -fno-common
Fri, 26 Jul 2019
[ 20:46 gerald search for other commits by this committer ] Original commit   Revision:507372 (Only the first 10 of 3853 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.

PR:		238330
Wed, 12 Dec 2018
[ 01:35 gerald search for other commits by this committer ] Original commit   Revision:487272 (Only the first 10 of 3168 ports in this commit are shown above. View all ports for this commit)
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.

This includes ports
 - with USE_GCC=yes or USE_GCC=any,
 - with USES=fortran,
 - using Mk/bsd.octave.mk which in turn features USES=fortran, and
 - with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
   c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.

PR:		231590
Tue, 18 Sep 2018
[ 09:28 linimon search for other commits by this committer ] Original commit   Revision:480003
Upgrade these ports to USES=compiler:c++11-lang to fix build on gcc-based
archs such as powerpc64.

Tested for no effect on amd64.

While here, pet portlint.

Approved by:	portgmr (tier-2 blanket)
Thu, 21 Jun 2018
[ 23:52 linimon search for other commits by this committer ] Original commit   Revision:473009 (Only the first 10 of 19 ports in this commit are shown above. View all ports for this commit)
Mark as broken on aarch64, and, where appropriate, armvX.

While here, pet portlint.

Approved by:	portmgr (tier-2 blanket)
Fri, 20 Apr 2018
[ 00:07 jwb search for other commits by this committer ] Original commit   Revision:467806 (Only the first 10 of 16 ports in this commit are shown above. View all ports for this commit)
biology/freebayes: Bayesian haplotype-based polymorphism discovery and
genotyping

Approved by:    jrm (mentor)
Differential Revision:  https://reviews.freebsd.org/D15116

Number of commits found: 16