non port: biology/freebayes/Makefile |
SVNWeb
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Number of commits found XX: 7 |
Sat, 2 Jan 2021
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[ 01:46 linimon ] 
559904 biology/avida/Makefile
559904 biology/bwa/Makefile
559904 biology/freebayes/Makefile
559904 biology/ngs-sdk/Makefile
559904 biology/pear-merger/Makefile
559904 biology/vcflib/Makefile
559904 cad/jspice3/Makefile
559904 comms/mgetty+sendfax/Makefile
559904 comms/uartlirc/Makefile
559904 databases/leofs/Makefile
(Only the first 10 of 34 ports in this commit are shown above. )
For ports on riscv64 that fail the same (or similar ways) to aarch64, mark
them BROKEN.
While here, pet portlint (Makevar order).
Approved by: portmgr (tier-2 blanket)
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Mon, 21 Sep 2020
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[ 18:14 se ] 
549476 biology/freebayes/Makefile
549476 biology/freebayes/files/patch-SeqLib_bwa_rle.h
549476 biology/freebayes/files/patch-SeqLib_fermi-lite_rle.h
Fix build with -fno-common
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Fri, 26 Jul 2019
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[ 20:46 gerald ] 
507372 Mk/bsd.ruby.mk
507372 accessibility/atkmm/Makefile
507372 accessibility/kmag/Makefile
507372 accessibility/kmousetool/Makefile
507372 accessibility/kmouth/Makefile
507372 accessibility/libqaccessibilityclient/Makefile
507372 accessibility/qt5-speech/Makefile
507372 archivers/R-cran-zip/Makefile
507372 archivers/ark/Makefile
507372 archivers/brotli/Makefile
(Only the first 10 of 3853 ports in this commit are shown above. )
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330
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Wed, 12 Dec 2018
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[ 01:35 gerald ] 
487272 Mk/bsd.ruby.mk
487272 accessibility/atkmm/Makefile
487272 accessibility/kmag/Makefile
487272 accessibility/kmousetool/Makefile
487272 accessibility/kmouth/Makefile
487272 accessibility/qt5-speech/Makefile
487272 archivers/R-cran-zip/Makefile
487272 archivers/ark/Makefile
487272 archivers/brotli/Makefile
487272 archivers/c-blosc/Makefile
(Only the first 10 of 3168 ports in this commit are shown above. )
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.
PR: 231590
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Tue, 18 Sep 2018
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[ 09:28 linimon ] 
480003 biology/freebayes/Makefile
480003 databases/php-xapian/Makefile
480003 games/OpenTomb/Makefile
480003 games/numptyphysics/Makefile
480003 games/stockfish/Makefile
480003 graphics/poppler/Makefile
480003 science/antioch/Makefile
480003 security/veracrypt/Makefile
Upgrade these ports to USES=compiler:c++11-lang to fix build on gcc-based
archs such as powerpc64.
Tested for no effect on amd64.
While here, pet portlint.
Approved by: portgmr (tier-2 blanket)
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Thu, 21 Jun 2018
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[ 23:52 linimon ] 
473009 astro/astrometry/Makefile
473009 astro/boinc-setiathome/Makefile
473009 audio/deadbeef/Makefile
473009 audio/py-karaoke/Makefile
473009 audio/zynaddsubfx/Makefile
473009 biology/canu/Makefile
473009 biology/freebayes/Makefile
473009 biology/pear-merger/Makefile
473009 biology/trimadap/Makefile
473009 comms/wspr/Makefile
(Only the first 10 of 19 ports in this commit are shown above. )
Mark as broken on aarch64, and, where appropriate, armvX.
While here, pet portlint.
Approved by: portmgr (tier-2 blanket)
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Fri, 20 Apr 2018
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[ 00:07 jwb ] 
467806 biology/Makefile
467806 biology/freebayes
467806 biology/freebayes/Makefile
467806 biology/freebayes/distinfo
467806 biology/freebayes/files
467806 biology/freebayes/files/patch-Makefile
467806 biology/freebayes/files/patch-SeqLib_bwa_Makefile
467806 biology/freebayes/files/patch-SeqLib_bwa_bwt__lite.c
467806 biology/freebayes/files/patch-SeqLib_bwa_bwtgap.h
467806 biology/freebayes/files/patch-SeqLib_bwa_kthread.c
(Only the first 10 of 16 ports in this commit are shown above. )
biology/freebayes: Bayesian haplotype-based polymorphism discovery and
genotyping
Approved by: jrm (mentor)
Differential Revision: https://reviews.freebsd.org/D15116
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Number of commits found XX: 7 |
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Latest Vulnerabilities |
13 vulnerabilities affecting 98 ports have been reported in the past 14 days
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* - modified, not new All vulnerabilities
Last updated: 2021-01-21 13:20:51
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