| Port details on branch 2022Q3 |
- gemma Genome-wide Efficient Mixed Model Association
- 0.98.3_4 biology
 =0      0.98.3_4Version of this port present on the latest quarterly branch. - Maintainer: jwb@FreeBSD.org
- Port Added: 2019-05-17 14:45:38
- Last Update: 2023-12-12 19:03:50
- Commit Hash: ab17137
- License: GPLv3
- WWW:
- https://github.com/genetics-statistics/GEMMA
- Description:
- GEMMA is a software toolkit for fast application of linear mixed models (LMMs)
and related models to genome-wide association studies (GWAS) and other
large-scale data sets.
  ¦  ¦  ¦  ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- To install the port:
- cd /usr/ports/biology/gemma/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/gemma
- pkg install gemma
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: gemma
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1609514940
SHA256 (genetics-statistics-GEMMA-0.98.3_GH0.tar.gz) = 8c27874634269f52a194a41048e70c17e2128563f56bb8ef59338a93147c61ba
SIZE (genetics-statistics-GEMMA-0.98.3_GH0.tar.gz) = 49572695
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- eigen3.pc : math/eigen3
- gmake>=4.3 : devel/gmake
- Library dependencies:
-
- libgsl.so : math/gsl
- libopenblas.so : math/openblas
- There are no ports dependent upon this port
Configuration Options:- ===> The following configuration options are available for gemma-0.98.3_4:
EXAMPLES=on: Build and/or install examples
===> Use 'make config' to modify these settings
- Options name:
- biology_gemma
- USES:
- blaslapack:openblas compiler:c++11-lang eigen:3 gmake localbase:ldflags
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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