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non port: biology/igv/Makefile

Number of commits found: 21

Tuesday, 25 Apr 2023
15:17 Christian Weisgerber (naddy) search for other commits by this committer
audio/opus: bump consumers after update to 1.4
commit hash: feb1fa34f58ea796656b86a81c2a2996b0b03c96 commit hash: feb1fa34f58ea796656b86a81c2a2996b0b03c96 commit hash: feb1fa34f58ea796656b86a81c2a2996b0b03c96 commit hash: feb1fa34f58ea796656b86a81c2a2996b0b03c96 feb1fa3
Monday, 20 Feb 2023
07:20 Yuri Victorovich (yuri) search for other commits by this committer
biology/igv: Update 2.9.4 → 2.16.0

PR:		269690
Reported by:	jwb@
commit hash: b021237b2dda0a5c47aa770ea37bf8db96e4951b commit hash: b021237b2dda0a5c47aa770ea37bf8db96e4951b commit hash: b021237b2dda0a5c47aa770ea37bf8db96e4951b commit hash: b021237b2dda0a5c47aa770ea37bf8db96e4951b b021237
Wednesday, 7 Sep 2022
21:10 Stefan Eßer (se) search for other commits by this committer
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.

This commit implements such a proposal and moves one of the WWW: entries
of each pkg-descr file into the respective port's Makefile. A heuristic
attempts to identify the most relevant URL in case there is more than
one WWW: entry in some pkg-descr file. URLs that are not moved into the
Makefile are prefixed with "See also:" instead of "WWW:" in the pkg-descr
files in order to preserve them.

There are 1256 ports that had no WWW: entries in pkg-descr files. These
ports will not be touched in this commit.

The portlint port has been adjusted to expect a WWW entry in each port
Makefile, and to flag any remaining "WWW:" lines in pkg-descr files as
deprecated.

Approved by:		portmgr (tcberner)
commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 commit hash: b7f05445c00f2625aa19b4154ebcbce5ed2daa52 b7f0544
Thursday, 30 Sep 2021
21:23 Rene Ladan (rene) search for other commits by this committer
cleanup: drop support for EOL FreeBSD 11.X

Search criteria used:
- 11.4
- OSREL*
- OSVER*
- *_FreeBSD_11

Input from:
- adridg: devel/qca-legacy
- jbeich: _WITH_DPRINTF, _WITH_GETLINE, GNU bfd workarounds
- sunpoet: security/p5-*OpenSSL*

Reviewed by:	doceng, kde, multimedia, perl, python, ruby, rust
Differential Revision: https://reviews.freebsd.org/D32008
Test Plan: make index
commit hash: 620968a43a5f9bb3fa98ab20f257a4c0d864caa7 commit hash: 620968a43a5f9bb3fa98ab20f257a4c0d864caa7 commit hash: 620968a43a5f9bb3fa98ab20f257a4c0d864caa7 commit hash: 620968a43a5f9bb3fa98ab20f257a4c0d864caa7 620968a
Saturday, 21 Aug 2021
19:08 Yuri Victorovich (yuri) search for other commits by this committer
biology/igv: Broken on 11

Reported by:	fallout
commit hash: 70ea3d275664fd115f4480850009f75adc1dbf16 commit hash: 70ea3d275664fd115f4480850009f75adc1dbf16 commit hash: 70ea3d275664fd115f4480850009f75adc1dbf16 commit hash: 70ea3d275664fd115f4480850009f75adc1dbf16 70ea3d2
Sunday, 27 Jun 2021
09:33 Guangyuan Yang (ygy) search for other commits by this committer
biology/igv: Fix build

When switching the build dependency from devel/gradle to devel/gradle6,
the build is accidentally broken. This attempts to revert part of the
change and fix build.

Fixes:		55044a2200a4c42b6b653349f0a65dfca3f96f36
Approved by:	lwhsu (mentor, implicit), portmgr (fix build)
commit hash: 68a87e3c5a88c63e0c9db5e83d564ac8f5801df8 commit hash: 68a87e3c5a88c63e0c9db5e83d564ac8f5801df8 commit hash: 68a87e3c5a88c63e0c9db5e83d564ac8f5801df8 commit hash: 68a87e3c5a88c63e0c9db5e83d564ac8f5801df8 68a87e3
01:51 Guangyuan Yang (ygy) search for other commits by this committer
devel/gradle6: New port

devel/gradle needs to be updated to 7.x, while some ports build failed
under the newer version, including:

- biology/jalview
- biology/igv

Updated them to use this devel/gradle6 until they officially support 7.x.
No functional changes for these ports.

Approved by:	lwhsu (mentor)
commit hash: 55044a2200a4c42b6b653349f0a65dfca3f96f36 commit hash: 55044a2200a4c42b6b653349f0a65dfca3f96f36 commit hash: 55044a2200a4c42b6b653349f0a65dfca3f96f36 commit hash: 55044a2200a4c42b6b653349f0a65dfca3f96f36 55044a2
Wednesday, 7 Apr 2021
08:09 Mathieu Arnold (mat) search for other commits by this committer
One more small cleanup, forgotten yesterday.
Reported by:	lwhsu
commit hash: cf118ccf875508b9a1c570044c93cfcc82bd455c commit hash: cf118ccf875508b9a1c570044c93cfcc82bd455c commit hash: cf118ccf875508b9a1c570044c93cfcc82bd455c commit hash: cf118ccf875508b9a1c570044c93cfcc82bd455c cf118cc
Tuesday, 6 Apr 2021
14:31 Mathieu Arnold (mat) search for other commits by this committer
Remove # $FreeBSD$ from Makefiles.
commit hash: 305f148f482daf30dcf728039d03d019f88344eb commit hash: 305f148f482daf30dcf728039d03d019f88344eb commit hash: 305f148f482daf30dcf728039d03d019f88344eb commit hash: 305f148f482daf30dcf728039d03d019f88344eb 305f148
Sunday, 28 Mar 2021
16:41 yuri search for other commits by this committer
biology/igv: Update 2.8.13 -> 2.9.4
Original commitRevision:569400 
Monday, 30 Nov 2020
17:29 yuri search for other commits by this committer
biology/igv: Fix fetch by fixing a small left-over mistake

PR:		250980
Reported by:	jwb
Original commitRevision:556663 
01:06 yuri search for other commits by this committer
biology/igv: 2.5.3 -> 2.8.13

PR:		250980
Original commitRevision:556609 
Thursday, 19 Mar 2020
09:33 tobik search for other commits by this committer
Deprecate java/openjfx8-devel consumers

Chase r527795 and put a deprecation notice on all openjfx8-devel
dependent ports too.

Also deprecate devel/gradle4 which is only needed to build igv and
openjfx8-devel.
Original commitRevision:528706 
Saturday, 1 Jun 2019
20:49 yuri search for other commits by this committer
biology/igv: Update 2.5.2 -> 2.5.3

Reported by:	portscout
Original commitRevision:503255 
Saturday, 11 May 2019
05:59 yuri search for other commits by this committer
biology/igv: Update 2.5.0 -> 2.5.2

Reported by:	portscout
Original commitRevision:501223 
Thursday, 4 Apr 2019
04:49 yuri search for other commits by this committer
biology/igv: Update 2.4.19 -> 2.5.0

Reported by:	portscout
Original commitRevision:497786 
Saturday, 23 Feb 2019
21:23 yuri search for other commits by this committer
biology/igv: Update 2.4.16 -> 2.4.19

Reported by:	portscout
Original commitRevision:493730 
Tuesday, 4 Dec 2018
17:53 yuri search for other commits by this committer
devel/gradle: Update to 5.0

Change biology/igv and biology/gatk to gradle4 due to build failures with
gradle5.

PR:		233623
Approved by:	gasol.wu@gmail.com (maintainer)
Original commitRevision:486619 
Sunday, 18 Nov 2018
20:02 yuri search for other commits by this committer
biology/igv: Update 2.4.15 -> 2.4.16

Reported by:	portscout
Original commitRevision:485255 
Sunday, 4 Nov 2018
22:55 yuri search for other commits by this committer
biology/igv: Update 2.4.10 -> 2.4.15

Port changes:
* Change to gradle, corresponding updates in build, install, environment, etc.

Reported by:	portscout
Original commitRevision:484156 
Monday, 25 Jun 2018
23:56 yuri search for other commits by this committer
New port: biology/igv: Visualization tool for genomic datasets
Original commitRevision:473356 

Number of commits found: 21