non port: biology/infernal/Makefile |
Number of commits found: 10 |
Thursday, 22 Feb 2024
|
13:23 Muhammad Moinur Rahman (bofh)
biology/infernal: Moved man to share/man
Approved by: portmgr (blanket)
806984b |
Tuesday, 27 Jun 2023
|
19:34 Rene Ladan (rene)
all: remove explicit versions in USES=python for "3.x+"
The logic in USES=python will automatically convert this to 3.8+ by
itself.
Adjust two ports that only had Python 3.7 mentioned but build fine
on Python 3.8 too.
finance/quickfix: mark BROKEN with PYTHON
libtool: compile: c++ -DHAVE_CONFIG_H -I. -I../.. -I -I. -I.. -I../.. -I../C++
-DLIBICONV_PLUG -DPYTHON_MAJOR_VERSION=3 -Wno-unused-variable
-Wno-maybe-uninitialized -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong
-fno-strict-aliasing -DLIBICONV_PLUG -Wall -ansi
-Wno-unused-command-line-argument -Wpointer-arith -Wwrite-strings
-Wno-overloaded-virtual -Wno-deprecated-declarations -Wno-deprecated -std=c++0x
-MT _quickfix_la-QuickfixPython.lo -MD -MP -MF
.deps/_quickfix_la-QuickfixPython.Tpo -c QuickfixPython.cpp -fPIC -DPIC -o
.libs/_quickfix_la-QuickfixPython.o
warning: unknown warning option '-Wno-maybe-uninitialized'; did you mean
'-Wno-uninitialized'? [-Wunknown-warning-option]
QuickfixPython.cpp:175:11: fatal error: 'Python.h' file not found
^~~~~~~~~~
1 warning and 1 error generated.
Reviewed by: portmgr, vishwin, yuri
Differential Revision: <https://reviews.freebsd.org/D40568>
3d9a815 |
Wednesday, 12 Oct 2022
|
10:15 Nuno Teixeira (eduardo) Author: Motomichi Matsuzaki
biology/infernal: Update to 1.1.4
ChangeLog: http://eddylab.org/infernal/RELEASE-1.1.4.md
PR: 266967
95b2e3a |
Wednesday, 7 Sep 2022
|
21:10 Stefan Eßer (se)
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
This commit implements such a proposal and moves one of the WWW: entries
of each pkg-descr file into the respective port's Makefile. A heuristic
attempts to identify the most relevant URL in case there is more than
one WWW: entry in some pkg-descr file. URLs that are not moved into the
Makefile are prefixed with "See also:" instead of "WWW:" in the pkg-descr
files in order to preserve them.
There are 1256 ports that had no WWW: entries in pkg-descr files. These
ports will not be touched in this commit.
The portlint port has been adjusted to expect a WWW entry in each port
Makefile, and to flag any remaining "WWW:" lines in pkg-descr files as
deprecated.
Approved by: portmgr (tcberner)
b7f0544 |
Wednesday, 7 Apr 2021
|
08:09 Mathieu Arnold (mat)
One more small cleanup, forgotten yesterday.
Reported by: lwhsu
cf118cc |
Tuesday, 6 Apr 2021
|
14:31 Mathieu Arnold (mat)
Remove # $FreeBSD$ from Makefiles.
305f148 |
Thursday, 24 Sep 2020
|
20:38 linimon
Also enable on powerpc64le.
Approved by: portmgr (tier-2 blanket)
|
Monday, 27 Jan 2020
|
17:57 fernape
biology/infernal: update to 1.1.3
PR: 243247
Submitted by: mzaki@e-mail.ne.jp (maintainer)
|
Thursday, 27 Sep 2018
|
23:02 linimon
Allow building on powerpc64.
PR: 231759
Submitted by: Piotr Kubaj
Approved by: portmgr (tier-2 blanket)
|
Wednesday, 6 Jun 2018
|
15:15 krion
Add new port: biology/infernal
Infernal is a tool for searching DNA sequence database for RNA
structure and sequence similarities. The Rfam database of RNA
families is based on Infernal, and we can search DNA sequences for
structural homologs of Rfam families.
WWW: http://eddylab.org/infernal/
PR: 228776
Submitted by: Motomichi Matsuzaki <mzaki@niid.go.jp>
|
Number of commits found: 10 |