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non port: biology/kallisto/files/patch-ext_htslib_configure.ac

Number of commits found: 2

Wednesday, 19 Jan 2022
13:57 Jason W. Bacon (jwb) search for other commits by this committer 
biology/kallisto: Update to 0.48.0

Fixes segfault with --genomebam in 0.46.2
Unbundle htslib
A few new features and performance improvements

Changes:        https://github.com/pachterlab/kallisto/tags
commit hash: c9bd01bdf4c1dae17b53482e9dabe000d310cf50 commit hash: c9bd01bdf4c1dae17b53482e9dabe000d310cf50 commit hash: c9bd01bdf4c1dae17b53482e9dabe000d310cf50 commit hash: c9bd01bdf4c1dae17b53482e9dabe000d310cf50 c9bd01b
Monday, 3 Aug 2020
15:45 jwb search for other commits by this committer 
biology/kallisto: Revert to 0.46.1

0.46.2 has long-standing regressions that are not being addressed, including
a seg fault when using --genomebam.
Also revert to bundled htslib in preparation for biology/htslib upgrade
to 1.10.  Kallisto source contains modified bits of htslib 1.4.1 that are
incompatible with htslib > 1.9.
Original commitRevision:544077 

Number of commits found: 2
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