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non port: biology/libgenome/Makefile

Number of commits found: 25

Tuesday, 11 Mar 2014
21:21 antoine search for other commits by this committer
Deprecate a few old unmaintained ports
Original commitRevision:347934 
Friday, 20 Sep 2013
15:55 bapt search for other commits by this committer
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Original commitRevision:327709 
Wednesday, 14 Aug 2013
09:53 marino search for other commits by this committer
biology/libgenome: Mark jobs unsafe

Approved by: 	bapt/culot (mentors, implicit)
Original commitRevision:324692 
Wednesday, 19 Jun 2013
18:53 bsam search for other commits by this committer
. add license (GPLv2);
. bump PORTREVISION;
. NOPORTDOCS -> PORT_OPTIONS:MDOCS;
. trim Makefile headers.
Original commitRevision:321307 
Saturday, 4 Dec 2010
07:34 ade search for other commits by this committer
Sync to new bsd.autotools.mk
Original commit
Sunday, 2 Aug 2009
19:36 mezz search for other commits by this committer
-Repocopy devel/libtool15 -> libtool22 and libltdl15 -> libltdl22.
-Update libtool and libltdl to 2.2.6a.
-Remove devel/libtool15 and devel/libltdl15.
-Fix ports build with libtool22/libltdl22.
-Bump ports that depend on libltdl22 due to shared library version change.
-Explain what to do update in the UPDATING.

It has been tested with GNOME2, XFCE4, KDE3, KDE4 and other many wm/desktop
and applications in the runtime.

With help:      marcus and kwm
Pointyhat-exp:  a few times by pav
Tested by:      pgollucci, "Romain Tartière" <romain@blogreen.org>, and
                a few MarcusCom CVS users. Also, I might have missed a few.
Repocopy by:    marcus
Approved by:    portmgr
Original commit
Thursday, 21 Aug 2008
06:18 rafan search for other commits by this committer
Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script.
Specifically, newer autoconf (> 2.13) has different semantic of the
configure target. In short, one should use --build=CONFIGURE_TARGET
instead of CONFIGURE_TARGET directly. Otherwise, you will get a warning
and the old semantic may be removed in later autoconf releases.

To workaround this issue, many ports hack the CONFIGURE_TARGET variable
so that it contains the ``--build='' prefix.

To solve this issue, under the fact that some ports still have
configure script generated by the old autoconf, we use runtime detection
in the do-configure target so that the proper argument can be used.

Changes to Mk/*:
 - Add runtime detection magic in bsd.port.mk
 - Remove CONFIGURE_TARGET hack in various bsd.*.mk
 - USE_GNOME=gnometarget is now an no-op

Changes to individual ports, other than removing the CONFIGURE_TARGET hack:

= pkg-plist changed (due to the ugly CONFIGURE_TARGET prefix in * executables)
  - comms/gnuradio
  - science/abinit
  - science/elmer-fem
  - science/elmer-matc
  - science/elmer-meshgen2d
  - science/elmerfront
  - science/elmerpost

= use x86_64 as ARCH
  - devel/g-wrap

= other changes
  - print/magicfilter
    GNU_CONFIGURE -> HAS_CONFIGURE since it's not generated by autoconf

Total # of ports modified:  1,027
Total # of ports affected: ~7,000 (set GNU_CONFIGURE to yes)

PR:             126524 (obsoletes 52917)
Submitted by:   rafan
Tested on:      two pointyhat 7-amd64 exp runs (by pav)
Approved by:    portmgr (pav)
Original commit
Wednesday, 18 Jun 2008
19:08 pav search for other commits by this committer
- Fix fetch, update WWW
Original commit
Thursday, 1 Feb 2007
02:42 kris search for other commits by this committer
Use libtool port instead of included version to avoid objformat a.out botch
Original commit
Monday, 14 Aug 2006
10:08 clsung search for other commits by this committer
- s,INSTALLS_SHLIB,USE_LDCONFIG,g
- these include astro/ audio/ biology/ chinese/ maintained by ports@

PR:             ports/101916
Submitted by:   Gea-Suan Lin <gslin_AT_gslin dot org>
Original commit
Wednesday, 3 May 2006
23:26 edwin search for other commits by this committer
Remove USE_REINPLACE from all categories starting with B
Original commit
Thursday, 23 Feb 2006
10:40 ade search for other commits by this committer
Conversion to a single libtool environment.

Approved by:    portmgr (kris)
Original commit
Tuesday, 15 Nov 2005
06:52 ade search for other commits by this committer
Mass-conversion to the USE_AUTOTOOLS New World Order.  The code present
in bsd.autotools.mk essentially makes this a no-op given that all the
old variables set a USE_AUTOTOOLS_COMPAT variable, which is parsed in
exactly the same way as USE_AUTOTOOLS itself.

Moreover, USE_AUTOTOOLS has already been extensively tested by the GNOME
team -- all GNOME 2.12.x ports use it.

Preliminary documentation can be found at:
        http://people.FreeBSD.org/~ade/autotools.txt

which is in the process of being SGMLized before introduction into the
Porters Handbook.

Light blue touch-paper.  Run.
Original commit
Tuesday, 31 May 2005
16:34 oliver search for other commits by this committer
change the libtool version to use from 1.3 to 1.5
Original commit
Tuesday, 12 Apr 2005
03:26 obrien search for other commits by this committer
At Kris's request, back out the MACHINE_ARCH spelling correction until
after 5.4-RELEASE.
Original commit
Monday, 11 Apr 2005
08:04 obrien search for other commits by this committer
Assist getting more ports working on AMD64 by obeying the
Ports Collection documentation and use 'ARCH' rather than 'MACHINE_ARCH'.
Original commit
Friday, 9 Jul 2004
17:43 marcus search for other commits by this committer
Apply a big libtool patch to allow porters to use the libtool installed by
the libtoolX ports instead of the one included with each port.  Ports that
set USE_LIBTOOL_VER=X will now use the ports version of libtool instead of
the included version.  To restore previous behavior, use the new macro,
USE_INC_LIBTOOL_VER.  Both macros accept the same argument: a libtool version.

For example, to use the ports version of libtool-1.5, add the following to
your Makefile:

USE_LIBTOOL_VER=        15

To use the included version of libtool with extra hacks provided by
libtool-1.5, add the following to your Makefile:

USE_INC_LIBTOOL_VER=    15

With this change, ports that had to add additional libtool hacks to prevent
.la files from being installed or to fix certain threading issues can now
delete those hacks (after appropriate testing, of course).

PR:             63944
Based on work by:eik and marcus
Approved by:    ade (autotools maintainer)
Tested by:      kris on pointyhat
Bound to be hidden problems:    You bet
Original commit
Saturday, 22 May 2004
07:29 krion search for other commits by this committer
- Update MASTER_SITES and WWW: line

PR:             ports/67015
Submitted by:   Roman Neuhauser <neuhauser@chello.cz>
Original commit
Sunday, 14 Mar 2004
06:17 ade search for other commits by this committer
Whoa there, boy, that's a mighty big commit y'all have there...

Begin autotools sanitization sequence by requiring ports to explicitly
specify which version of {libtool,autoconf,automake} they need, erasing
the concept of a "system default".

For ports-in-waiting:

        USE_LIBTOOL=YES         ->      USE_LIBTOOL_VER=13
        USE_AUTOCONF=YES        ->      USE_AUTOCONF_VER=213
        USE_AUTOMAKE=YES        ->      USE_AUTOMAKE_VER=14

Ports attempting to use the old style system after June 1st 2004 will be
sorely disappointed.
Original commit
Monday, 20 Oct 2003
22:41 krion search for other commits by this committer
- Update to 0.5.2

PR:             58304
Submitted by:   Clement Laforet <sheepkiller@cultdeadsheep.org>
Original commit
Tuesday, 18 Feb 2003
14:09 naddy search for other commits by this committer
Fix install and packaging list.

Reported by:    kris
Original commit
Tuesday, 11 Feb 2003
18:13 naddy search for other commits by this committer
Update to version 0.5.1.

PR:             48047
Submitted by:   Ports Fury
Original commit
Thursday, 7 Nov 2002
03:10 adamw search for other commits by this committer
Fix PORTCOMMENTs that were killing INDEX builds.

105 pointy hats to:     me
Approved by:            pat
Original commit
Saturday, 17 Aug 2002
19:16 naddy search for other commits by this committer
- Support CXXFLAGS properly.
- Do not install .la file.

PR:             41732
Submitted by:   Ports Fury
Original commit
Tuesday, 30 Jul 2002
10:57 ijliao search for other commits by this committer
add libgenome 0.5.0
Toolkit for developing bioinformatic related software in C++
Original commit

Number of commits found: 25