| Port details on branch 2022Q3 |
- libgff GFF/GTF parsing library based on GCLib
- 2.0.0 biology
 =0      2.0.0Version of this port present on the latest quarterly branch. - Maintainer: jwb@FreeBSD.org
- Port Added: 2021-12-05 20:51:11
- Last Update: 2022-09-07 21:58:51
- Commit Hash: fb16dfe
- License: BSL
- WWW:
- https://github.com/COMBINE-lab/libgff
- Description:
- This is an attempt to perform a simple "libraryfication" of the GFF/GTF
parsing code that is used in GFFRead codebase. There are not many
(any?) relatively lightweight GTF/GFF parsers exposing a C++ interface,
and the goal of this library is to provide this functionality without
the necessity of drawing in a heavy-weight dependency like SeqAn. Note:
This library draws directly from the code in GFFRead and GCLib, and
exists primarily to remove functionality (and hence code) that is
unnecessary for our downstream purposes. In the future, it may be
appropriate to just replace this library wholesale with GCLib.
  ¦  ¦  ¦  ¦ 
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- To install the port:
- cd /usr/ports/biology/libgff/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/libgff
- pkg install libgff
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: libgff
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1631451501
SHA256 (COMBINE-lab-libgff-v2.0.0_GH0.tar.gz) = 7656b19459a7ca7d2fd0fcec4f2e0fd0deec1b4f39c703a114e8f4c22d82a99c
SIZE (COMBINE-lab-libgff-v2.0.0_GH0.tar.gz) = 102152
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- cmake : devel/cmake-core
- ninja : devel/ninja
- This port is required by:
- for Build
-
- biology/salmon
Configuration Options:- No options to configure
- Options name:
- biology_libgff
- USES:
- cmake
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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