non port: biology/libsbml/Makefile |
SVNWeb
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Number of commits found XX: 45 |
Sun, 20 Dec 2020
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[ 15:23 sunpoet ] 
558745 biology/libsbml/Makefile
Set CMAKE options explicitly
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Sat, 19 Dec 2020
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[ 20:05 sunpoet ] 
558491 biology/libsbml/Makefile
Add EXPAT, LIBXML and XERCES options
It allows choosing XML parser library.
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Thu, 10 Dec 2020
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[ 21:30 sunpoet ] 
557486 biology/libsbml/Makefile
557486 biology/libsbml/distinfo
557486 biology/libsbml/files/patch-CMakeLists.txt
557486 biology/libsbml/pkg-descr
Update to 5.19.0
Changes: https://github.com/sbmlteam/libsbml/releases
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Tue, 29 Sep 2020
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[ 18:23 sunpoet ] 
550609 biology/libsbml/Makefile
550609 biology/libsbml/files
550609 biology/libsbml/files/patch-CMakeLists.txt
Convert REINPLACE_CMD to patch file
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Sun, 27 Sep 2020
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[ 19:30 sunpoet ] 
550299 biology/libsbml/Makefile
Update PYTHON option to use Python 3
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Wed, 17 Jun 2020
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[ 18:17 sunpoet ] 
539491 MOVED
539491 audio/csound/Makefile
539491 audio/lash/Makefile
539491 biology/libsbml/Makefile
539491 cad/freecad/Makefile
539491 cad/kicad-devel/Makefile
539491 cad/kicad/Makefile
539491 cad/opensta/Makefile
539491 comms/gnuradio/Makefile
539491 comms/hamlib/Makefile
(Only the first 10 of 84 ports in this commit are shown above. )
Move devel/swig30 to devel/swig and update to 4.0.1
- Do not silence installation message
- Update dependent ports:
- Fix build with swig 4.0.1
- Update *_DEPENDS
- Remove BINARY_ALIAS
Changes: http://www.swig.org/news.php
PR: 246613
Exp-run by: antoine
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Sat, 8 Feb 2020
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[ 19:01 sunpoet ] 
525568 biology/libsbml/Makefile
Clean up Makefile
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Sat, 22 Jun 2019
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[ 21:48 sunpoet ] 
504890 biology/libsbml/Makefile
Use USES=pathfix
- Add USES=gnome
- Use = instead of += for PLIST_SUB
- Use CMAKE_BOOL
- Cosmetic change
- Take maintainership
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Mon, 20 May 2019
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[ 09:12 wen ] 
502097 biology/libsbml/Makefile
502097 biology/libsbml/distinfo
502097 biology/libsbml/pkg-plist
- Update to 5.18.0
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Tue, 25 Dec 2018
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[ 20:25 tcberner ] 
488341 CHANGES
488341 Mk/Uses/cmake.mk
488341 accessibility/jovie-kde4/Makefile
488341 accessibility/kaccessible-kde4/Makefile
488341 accessibility/kmag-kde4/Makefile
488341 accessibility/kmag/Makefile
488341 accessibility/kmousetool-kde4/Makefile
488341 accessibility/kmousetool/Makefile
488341 accessibility/kmouth-kde4/Makefile
488341 accessibility/kmouth/Makefile
(Only the first 10 of 1277 ports in this commit are shown above. )
Change cmake default behaviour to outsource.
Ports that build out of source now simply can use "USES=cmake"
instead of "USES=cmake:outsource". Ports that fail to build
out of source now need to specify "USES=cmake:insource".
I tried to only set insource where explictely needed.
PR: 232038
Exp-run by: antoine
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Sat, 25 Aug 2018
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[ 03:31 tobik ] 
477994 biology/libsbml/Makefile
biology/libsbml: Fix build with Clang 6
In file included from
/wrkdirs/usr/ports/biology/libsbml/work/libsbml-5.17.0/src/sbml/Model.cpp:41:
In file included from
/wrkdirs/usr/ports/biology/libsbml/work/libsbml-5.17.0/src/sbml/SBMLDocument.h:298:
In file included from
/wrkdirs/usr/ports/biology/libsbml/work/libsbml-5.17.0/src/sbml/SBMLTransforms.h:48:
In file included from
/wrkdirs/usr/ports/biology/libsbml/work/libsbml-5.17.0/src/sbml/FunctionDefinition.h:129:
In file included from
/wrkdirs/usr/ports/biology/libsbml/work/libsbml-5.17.0/src/sbml/SBO.h:207:
/usr/include/c++/v1/map:629:15: error: object of type
'std::__1::pair<std::__1::pair<const std::__1::basic_string<char>, int>,
FormulaUnitsData *>' cannot be assigned because its copy assignment operator is
implicitly deleted
{__nc = __v.__cc; return *this;}
^
http://beefy11.nyi.freebsd.org/data/head-i386-default/p477696_s338122/logs/errors/libsbml-5.17.0.log
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Fri, 24 Aug 2018
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[ 06:24 linimon ] 
477936 biology/libsbml/Makefile
Mark as broken with clang6 after r473289.
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Mon, 25 Jun 2018
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[ 01:37 wen ] 
473289 biology/libsbml/Makefile
473289 biology/libsbml/distinfo
473289 biology/libsbml/pkg-plist
- Update to 5.17.0
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Mon, 1 Jan 2018
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[ 08:24 wen ] 
457754 biology/libsbml/Makefile
457754 biology/libsbml/distinfo
457754 biology/libsbml/pkg-plist
- Update to 5.16.0
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Wed, 20 Dec 2017
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[ 19:34 bapt ] 
456845 audio/libgpod/Makefile
456845 biology/libsbml/Makefile
456845 comms/gnuradio/Makefile
456845 comms/owfs/Makefile
456845 devel/libftdi1/Makefile
456845 devel/py-instant/Makefile
456845 dns/ldns/Makefile
456845 emulators/gem5/Makefile
456845 graphics/hugin/Makefile
456845 graphics/mapserver/Makefile
(Only the first 10 of 13 ports in this commit are shown above. )
Switch from swig 2.0 to swig 3.0
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Thu, 30 Nov 2017
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[ 15:50 mat ] 
455210 CHANGES
455210 MOVED
455210 Mk/Uses/gnome.mk
455210 Mk/Uses/pyqt.mk
455210 Mk/Uses/python.mk
455210 UPDATING
455210 accessibility/Makefile
455210 accessibility/accerciser/Makefile
455210 accessibility/caribou/Makefile
455210 accessibility/orca/Makefile
(Only the first 10 of 2423 ports in this commit are shown above. )
Convert Python ports to FLAVORS.
Ports using USE_PYTHON=distutils are now flavored. They will
automatically get flavors (py27, py34, py35, py36) depending on what
versions they support.
There is also a USE_PYTHON=flavors for ports that do not use distutils
but need FLAVORS to be set. A USE_PYTHON=noflavors can be set if
using distutils but flavors are not wanted.
A new USE_PYTHON=optsuffix that will add PYTHON_PKGNAMESUFFIX has been
added to cope with Python ports that did not have the Python
PKGNAMEPREFIX but are flavored.
USES=python now also exports a PY_FLAVOR variable that contains the (Only the first 15 lines of the commit message are shown above )
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Thu, 18 May 2017
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[ 02:22 wen ] 
441126 biology/libsbml/Makefile
441126 biology/libsbml/distinfo
441126 biology/libsbml/pkg-plist
- Update to 5.15.0
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Wed, 2 Nov 2016
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[ 22:45 mat ] 
425174 audio/festdoc/Makefile
425174 audio/festlex-oald/Makefile
425174 audio/festlex-ogi/Makefile
425174 audio/festvox-don/Makefile
425174 audio/festvox-el11/Makefile
425174 audio/festvox-kal8/Makefile
425174 audio/festvox-ked16/Makefile
425174 audio/festvox-ked8/Makefile
425174 audio/festvox-rab16/Makefile
425174 audio/festvox-rab8/Makefile
(Only the first 10 of 110 ports in this commit are shown above. )
Cleanup no longer needed CHMOD usage after r424898.
PR: 213743
Submitted by: mat
Exp-run by: antoine
Sponsored by: Absolight
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Sat, 16 Apr 2016
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[ 01:54 mi ] 
413410 biology/libsbml/Makefile
413410 biology/libsbml/distinfo
413410 biology/libsbml/pkg-plist
Upgrade from 5.12.0 to 5.13.0. Release-announcement available here:
https://groups.google.com/forum/#!topic/sbml-discuss/OEq_49c_X78
Notified by: portscout
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Fri, 1 Apr 2016
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[ 13:29 mat ] 
412344 Mk/Uses/gecko.mk
412344 Mk/bsd.fpc.mk
412344 Mk/bsd.gecko.mk
412344 Mk/bsd.port.mk
412344 accessibility/accerciser/Makefile
412344 accessibility/at-spi/Makefile
412344 accessibility/at-spi2-atk/Makefile
412344 accessibility/at-spi2-core/Makefile
412344 accessibility/caribou/Makefile
412344 accessibility/dasher/Makefile
(Only the first 10 of 1009 ports in this commit are shown above. )
Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.
With hat: portmgr
Sponsored by: Absolight
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Sun, 27 Mar 2016
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[ 07:09 wen ] 
411978 biology/libsbml/Makefile
411978 biology/libsbml/distinfo
411978 biology/libsbml/pkg-plist
- Update to 5.12.0
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Wed, 14 Oct 2015
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[ 23:51 amdmi3 ] 
399316 biology/libsbml/Makefile
- Add LICENSE_FILE
- Switch to options helpers
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Tue, 25 Aug 2015
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[ 13:15 rakuco ] 
395248 biology/libsbml/Makefile
Switch to USES=iconv:build.
The port does not use iconv on its own, the only dependency comes via
libxml2, which has one header that includes iconv.h.
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Tue, 12 May 2015
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[ 08:58 wen ] 
386129 biology/libsbml/Makefile
386129 biology/libsbml/distinfo
386129 biology/libsbml/pkg-plist
- Update to 5.11.4
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Sun, 4 Jan 2015
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[ 08:23 mva ] 
376179 audio/streamtuner/Makefile
376179 biology/libsbml/Makefile
376179 databases/cassandra2/Makefile
376179 deskutils/recoll/Makefile
376179 devel/hachoir-core/Makefile
376179 devel/streamhtmlparser/Makefile
376179 graphics/graphviz/Makefile
376179 security/broccoli/Makefile
376179 security/openconnect/Makefile
- Convert USE_PYTHON -> USES leftovers missed in the previous commits
Spotted by: antoine
With hat: python
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Tue, 30 Dec 2014
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[ 12:57 wen ] 
375831 biology/libsbml/Makefile
375831 biology/libsbml/distinfo
375831 biology/libsbml/pkg-plist
- Update to 5.11.0
PR: 196377
Submitted by: koue@chaosophia.net
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Sun, 10 Aug 2014
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[ 06:21 wen ] 
364504 biology/libsbml/Makefile
364504 biology/libsbml/distinfo
364504 biology/libsbml/files
364504 biology/libsbml/pkg-plist
- Update to 5.10.2
PR: 192198
Submitted by: tkato432@yahoo.com
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Sat, 9 Aug 2014
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[ 15:44 mva ] 
364450 CHANGES
364450 Mk/Uses/python.mk
364450 Mk/bsd.port.mk
364450 Mk/bsd.port.subdir.mk
364450 Mk/bsd.python.mk
364450 Mk/bsd.sanity.mk
364450 Mk/bsd.sites.mk
364450 audio/rhythmbox/Makefile
364450 biology/libsbml/Makefile
364450 databases/ldb/Makefile
(Only the first 10 of 31 ports in this commit are shown above. )
Convert the Python framework bits to USES=python.
Please use USES=python instead of USE_PYTHON.
USE_PYTHON=yes becomes USES=python
USE_PYTHON=2.7+ becomes USES=python:2.7+
USE_PYTHON_BUILD=3.3 becomes USES=python:3.3,build
...
A new PYTHON_FEATURES variable was added, which enables certain features for a
port and replaces some knobs at the same time;
PYTHON_FEATURES=distutils replaces USE_PYDISTUTILS
PYTHON_FEATURES=autoplist replaces PYDISTUTILS_AUTOPLIST
PYTHON_FEATURES=py3kplist replaces PYTHON_PY3K_PLIST_HACK (Only the first 15 lines of the commit message are shown above )
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Tue, 13 May 2014
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[ 07:04 wen ] 
353921 biology/libsbml/Makefile
353921 biology/libsbml/distinfo
353921 biology/libsbml/pkg-plist
- Update to 5.10.0
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[ 02:46 wen ] 
353913 biology/libsbml/Makefile
353913 biology/libsbml/distinfo
353913 biology/libsbml/pkg-plist
- Update to 5.9.0 [1]
- Stage support [1]
- Add LICENSE [1]
- Reset maintainer to port@
PR: 188554 [1]
Submitted by: Muhammad Moinur Rahman <5u623l20@gmail.com> [1]
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Wed, 16 Apr 2014
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[ 18:28 zeising ] 
351411 Mk/bsd.port.mk
351411 Mk/bsd.xorg.mk
351411 UPDATING
351411 accessibility/gok/Makefile
351411 archivers/libarchive/Makefile
351411 archivers/xar/Makefile
351411 astro/boinc-astropulse/Makefile
351411 astro/boinc-setiathome-v7/Makefile
351411 astro/celestia/Makefile
351411 astro/foxtrotgps/Makefile
(Only the first 10 of 1008 ports in this commit are shown above. )
The FreeBSD x11@ and graphics team proudly presents
a zeising, kwm production, with help from dumbbell, bdrewery:
NEW XORG ON FREEBSD 9-STABLE AND 10-STABLE
This update switches over to use the new xorg stack by default on FreeBSD 9
and 10 stable, on osversions where vt(9) is available.
It is still possible to use the old stack by specifying WITHOUT_NEW_XORG in
/etc/make.conf .
FreeBSD 8-STABLE and released versions of FreeBSD still use
the old version.
A package repository with binary packages for new xorg will
be available soon.
This patch also contains updates of libxcb and related ports, pixman, as well (Only the first 15 lines of the commit message are shown above )
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Fri, 7 Mar 2014
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[ 15:52 bapt ] 
347402 benchmarks/netio/Makefile
347402 benchmarks/pybench/Makefile
347402 benchmarks/scimark2/Makefile
347402 benchmarks/scimark2c/Makefile
347402 biology/biojava/Makefile
347402 biology/blat/Makefile
347402 biology/libsbml/Makefile
347402 biology/plink/Makefile
347402 biology/seqan/Makefile
Convert b* to USES=zip
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Wed, 15 Jan 2014
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[ 22:50 bapt ] 
339844 biology/libsbml/Makefile
Reduce over inclusion of bsd.port.mk
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Wed, 11 Dec 2013
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[ 14:43 bapt ] 
336171 biology/crux/Makefile
336171 biology/embassy/Makefile
336171 biology/emboss/Makefile
336171 biology/iolib/Makefile
336171 biology/libsbml/Makefile
336171 biology/mopac/Makefile
336171 biology/ortep3/Makefile
336171 biology/plink/Makefile
336171 biology/plinkseq/Makefile
336171 biology/protomol/Makefile
(Only the first 10 of 12 ports in this commit are shown above. )
In preparation for making libtool generate libraries with a sane name, fix all
LIB_DEPENDS in biology
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Sun, 1 Dec 2013
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[ 01:58 wen ] 
335360 biology/libsbml/Makefile
- Fix build on head
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Thu, 10 Oct 2013
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[ 18:08 tabthorpe ] 
330025 biology/libsbml/Makefile
- Switch to build with lang/ruby19
- No PORTREVISION bump, option is off by default
With hat: portmgr
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Fri, 20 Sep 2013
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[ 15:55 bapt ] 
327709 biology/ariadne/Makefile
327709 biology/artemis/Makefile
327709 biology/avida/Makefile
327709 biology/babel/Makefile
327709 biology/biococoa/Makefile
327709 biology/biojava/Makefile
327709 biology/blast/Makefile
327709 biology/blat/Makefile
327709 biology/boinc-simap/Makefile
327709 biology/chemeq/Makefile
(Only the first 10 of 94 ports in this commit are shown above. )
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
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Mon, 18 Mar 2013
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[ 06:50 jgh ] 
314530 biology/libsbml/Makefile
- adoption of optionsNG
- trim historical header
- tighten COMMENT
Approved by: portmgr (miwi)
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Fri, 8 Oct 2010
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[ 02:06 wen ]
1.7 biology/libsbml/Makefile
1.5 biology/libsbml/distinfo
1.4 biology/libsbml/pkg-plist
- Update to 4.2.0
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Thu, 16 Sep 2010
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[ 03:31 wen ]
1.6 biology/libsbml/Makefile
1.4 biology/libsbml/distinfo
1.3 biology/libsbml/pkg-plist
- Update to 4.1.0
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Mon, 24 May 2010
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[ 07:19 wen ]
1.5 biology/libsbml/Makefile
1.3 biology/libsbml/distinfo
- Update to 4.0.1
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Fri, 20 Nov 2009
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[ 22:53 pav ]
1.13 archivers/kbackup/Makefile
1.7 audio/libjackasyn/Makefile
1.34 audio/pd/Makefile
1.6 audio/praat/Makefile
1.16 benchmarks/nbench/Makefile
1.5 benchmarks/pathchirp/Makefile
1.4 benchmarks/pathload/Makefile
1.4 biology/libsbml/Makefile
1.2 biology/mapm3/Makefile
1.28 cad/leocad/Makefile
(Only the first 10 of 102 ports in this commit are shown above. )
- Mark MAKE_JOBS_UNSAFE
Reported by: pointyhat
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Wed, 23 Sep 2009
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[ 01:06 wen ]
1.3 biology/libsbml/Makefile
1.2 biology/libsbml/distinfo
1.2 biology/libsbml/files/patch-Makefile.in
1.2 biology/libsbml/pkg-plist
- Update to 4.0.0
- Update my mail address to FreeBSD
PR: ports/137652
Submitted by: wenheping@gmail.com(myself)
Approved by: miwi(mentor)
Feature safe: yes
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Sat, 22 Aug 2009
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[ 00:15 amdmi3 ]
1.22 benchmarks/iperf/Makefile
1.24 benchmarks/lmbench/Makefile
1.14 benchmarks/sysbench/Makefile
1.26 biology/avida/Makefile
1.2 biology/libsbml/Makefile
1.23 biology/mopac/Makefile
1.10 biology/protomol/Makefile
1.2 biology/pycogent/Makefile
1.9 cad/adms/Makefile
1.7 cad/atlc/Makefile
(Only the first 10 of 78 ports in this commit are shown above. )
- Switch SourceForge ports to the new File Release System: categories starting
with B,C
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Thu, 28 May 2009
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[ 23:36 miwi ]
1.106 biology/Makefile
1.1 biology/libsbml/Makefile
1.1 biology/libsbml/distinfo
1.1 biology/libsbml/files/patch-Makefile.in
1.1 biology/libsbml/pkg-descr
1.1 biology/libsbml/pkg-plist
LibSBML is an open-source programming library to help you read, write,
manipulate, translate, and validate SBML files and data streams. It is
not an application itself (though it does come with example programs),
but rather a library you can embed in your own applications.
LibSBML understands all Levels and Versions of SBML, as well as the
SBML Layout proposal by Gauges, Rost, Sahle and Wegner. It's written in
ISO C and C++ but can be used from all the languages listed in the
right-hand box.
WWW: http://www.sbml.org/
PR: ports/135022
Submitted by: Wen Heping <wenheping at gmail.com>
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Number of commits found XX: 45 |