20:00 Yuri Victorovich (yuri) 

biology/molden: Update 6.7 -> 7.1

PR:		265245
Approved by:	jmd@ (maintainer)

    8dc7394

23:01 Johannes M Dieterich (jmd) 

biology/molden: update to 6.7

PR:		238858
Reported by:	yuri@

    1571a42

07:03 jmd 

biology/molden: update to 5.8.2

Also add do-install-{option}-on targets and shadow ${MKDIR} commands.

PR:		233060
Submitted by:	yuri

 

21:41 jmd 

biolog/molden: unbreak after at least two intransparent distfile updates

Reviewed by:	zeising (mentor)
Approved by:	zeising (mentor)
Differential Revision:	https://reviews.freebsd.org/D15333

 

03:48 jmd 

biology/molden: chase another intransparent upstream distfile upgrade.

Reviewed by:	swills (mentor), mat
Approved by:	swills (mentor)
Differential Revision:	https://reviews.freebsd.org/D12829

 

02:43 jmd 

biology/molden: unbreak by chasing latest intransparent distfile update.

Reviewed by:	swills (mentor)
Approved by:	swills (mentor)
Differential Revision:	https://reviews.freebsd.org/D12521

 

21:56 jmd 

Chase next distfile update. Upstream contacted whether we would be allowed to
host a distfile copy.

Reviewed by:	swills (mentor)
Approved by:	swills (mentor)
Differential Revision:	https://reviews.freebsd.org/D11586

 

03:37 jmd 

biology/molden: Unbreak by chasing their latest opaque update to the
distribution.

Reviewed by:	swills (mentor)
Approved by:	swills (mentor)
Differential Revision:	https://reviews.freebsd.org/D11338

 

03:26 jmd 

biology/molden: Chase recent upstream change of molden distfile.

Reviewed by:	swills (mentor)
Approved by:	swills (mentor)
Differential Revision:	https://reviews.freebsd.org/D10864

 

02:06 jmd 

biology/molden: Unbreak port, regenerate checksums, increment PORTREVISION.

Reviewed by:	swills (mentor), pi (former maintainer)
Approved by:	swills (mentor), pi (former maintainer)
Differential Revision:	https://reviews.freebsd.org/D9501

 

17:03 pi 

biology/molden: distfile was updated in xwin.c

 

20:49 pi 

biology/molden: fix distinfo, set LICENSE

Submitted by:	marino
Reported by:	Eduardo Lemos de Sa <eduardo.lemosdesa@gmail.com>
MFH:		2016Q4

 

06:00 pi 

biology/molden: 5.4 -> 5.7

- Adds editable text fields that are longer than the visible string
  and introduces a new way of selecting a range of amino acids.
- introduces interfaces to the open source packages openbabel and pharmer.
  Openbabel is used to create 2D images of the molecules in a .sdf
  file. It is also used to do 2D fingerprint searching.
  Pharmer is used to pharmacophore (3D) searching against indexed
  databases of .sdf files.

 

19:31 pi 

biology/molden: updated distfile, take maintainer

- upstream distfile is moving target with same version number

Submitted by:	antoine

 

19:32 pi 

biology/molden: 5.0.7 -> 5.4

Changes:
- Missing hydrogens atoms of HETATM molecules (pdb files) are stored locally.
- Pdb files can now be clipped.
- Fixes missing residues. Introduces an alternative way of generating rotamers,
  without using z-matrices. This potentially a faster algorithm.
- Supports Movie making through avconv/ffmpeg.
- calculates the Electron Localization Function (ELF).
- Updated code of ambfor/ambmd to speed up optimisations/MD of proteins
  solvated in water (Jan, 2014).

PR:		204341

 

08:58 miwi 

- Update to 5.0.7

PR:		185942
Submitted by:	ports fury

 

06:57 miwi 

- Update to 5.0.6

PR:		178032
Submitted by:	Ports Fury

 

17:47 eadler 

Update to 5.0.4

 

23:51 sperber 

- Update to version 5.0.2
- Add MAKE_JOBS_UNSAFE
- Convert to optionsng

PR:           ports/171970
Submitted by: KATO Tsuguru <tkato432 _at_ yahoo.com>
Approved by:  beat (mentor)
Feature safe: yes

 

12:38 miwi 

- Get Rid MD5 support

19:31 pav 

- Unbreak distinfo after portrevision bump

Reported by:    pointyhat

02:21 wxs 

- Roll back to 4.6 as 4.7 is the development version and is constantly being
  re-rolled.
- Move post-patch target into files/patch-xwin.c to remove sed invocation.
- Respect NOPORTDATA and DATADIR.
- Bring files/patch-aa back (to preserve history) and retire patch-makefile.
- Fixup files/patch-xwin.c so it applies cleanly to this version.

00:33 wxs 

Distfile was re-rolled.  The changes were to fix some bugs in the code.
While I'm here, make it respect NOPORTDOCS.

21:55 wxs 

Update to 4.7

PR:             ports/128476
Submitted by:   fulvio ciriaco <oivulf@gmail.com>

17:56 miwi 

- Remove unneeded dependency from gtk12/gtk20 [1]
- Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG
- Remove X11BASE support in favor of LOCALBASE or PREFIX
- Use USE_LDCONFIG instead of INSTALLS_SHLIB
- Remove unneeded USE_GCC 3.4+

Thanks to all Helpers:
        Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr,
        ehaupt, nox, itetcu, flz, pav

PR:             116263
Tested on:      pointyhat
Approved by:    portmgr (pav)

20:32 flz 

- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.

10:24 clsung 

- Update to 4.5

05:39 maho 

Using only gfortran42. not gcc42.
Bump portrevision.

13:41 thierry 

Unbreak: molden has been updated on Aug 17, with the same DISTNAME.

Changelog at <http://www.cmbi.ru.nl/molden/HISTORY>.

14:42 barner 

- Unbreak by updating to 4.4
- Add dependecy to MESA

PR:             ports/89795
Submitted by:   Johan van Selst <johans@stack.nl>

03:44 maho 

o update to 4.3
o unbreak
o due to no fix for long period, drop maintainership to ports.

04:17 maho 

enhancement, build and install the opengl viewer, moldenogl.
update to 3.9, not 3.8, which is newer :)

Committed by maintainer timeout:
> Sat Apr  5 17:46:57 EST 2003 - edwin - informed maintainer

PR:             47177
Submitted by:   Glenn Johnson <gjohnson@srrc.ars.usda.gov>

12:05 arved 

Update to 3.8

Approved by:    rmiya@cc.hirosaki-u.ac.jp (maintainer)

08:56 sada 

Back my last commit out.
We couldn't update distinfo without inspecting distfile's changes.
PR:     ports/37476
Suggested by:   kris

03:24 sada 

distfile has silently changed,
so md5 has to be rewritten.
PR:     ports/37476
Submitted by:   maintainer

19:59 sf 

o update to 3.7.   differences from the PR:    - this port requires Xlib so add
USE_XLIB.    - remove unnecessary PORTREVISION.    

13:32 sf 

chase checksum for repacked distfile almost an year ago.   Maintainer does not
have previous distfile.   As the distfile for this port is not distributable, it
is OK to me to change   distinfo now.    

11:59 jeh 

A file was added to distfile and then repackaged with the same name.