non port: biology/mrbayes/Makefile |
SVNWeb
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Number of commits found: 16 |
Wed, 7 Sep 2022
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[ 21:10 Stefan Eßer (se) ] b7f0544 (Only the first 10 of 27931 ports in this commit are shown above. )
Add WWW entries to port Makefiles
It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.
Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.
There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above )
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Wed, 20 Jul 2022
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[ 14:20 Tobias C. Berner (tcberner) ] 37526bb (Only the first 10 of 82 ports in this commit are shown above. )
biology: remove 'Created by' lines
A big Thank You to the original contributors of these ports:
* Aaron Dalton <aaron@FreeBSD.org>
* Akinori MUSHA aka knu <knu@idaemons.org>
* Andrey Zakhvatov
* Bob Zimmermann <rpz@cse.wustl.edu>
* Camson Huynh <chuynh@biolateral.com.au>
* Dan Siercks <dsiercks@uwm.edu>
* Fernan Aguero <fernan@iib.unsam.edu.ar>
* Hannes Hauswedell <h2+fbsdports@fsfe.org>
* J. Bacon <jwb@FreeBSD.org>
* Jason Bacon <jwb@FreeBSD.org>
* Jeremy <karlj000@unbc.ca> (Only the first 15 lines of the commit message are shown above )
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Sat, 15 May 2021
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[ 07:14 Tobias Kortkamp (tobik) Author: Yasuhiro Kimura ] 9671981 (Only the first 10 of 40 ports in this commit are shown above. )
*: Remove unnecessary 'port' argument from USES=readline
PR: 248459
Exp-run by: antoine
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Tue, 6 Apr 2021
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[ 14:31 Mathieu Arnold (mat) ] 305f148 (Only the first 10 of 29333 ports in this commit are shown above. )
Remove # $FreeBSD$ from Makefiles.
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Tue, 21 Apr 2020
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[ 21:47 danilo ]
- Swap back from net/openmpi3 to net/openmpi
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Wed, 15 Apr 2020
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[ 19:41 danilo ]
- Move OpenMPI support to net/openmpi3. OpenMPI 1 and 2 were deprecated.
Approved by: maintainer (e-mail)
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Sat, 29 Feb 2020
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[ 23:24 jrm ]
biology/mrbayes: Update to version 3.2.7
PR: 243237
Submitted by: mzaki@e-mail.ne.jp (maintainer, with modifications)
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Wed, 6 Nov 2019
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[ 12:48 antoine ] (Only the first 10 of 268 ports in this commit are shown above. )
Mark a few ports BROKEN, unfetchable
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Tue, 9 Apr 2019
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[ 14:04 sunpoet ] (Only the first 10 of 289 ports in this commit are shown above. )
Update devel/readline to 8.0
- Bump PORTREVISION of dependent ports for shlib change
Changes: https://tiswww.case.edu/php/chet/readline/CHANGES
PR: 236156
Exp-run by: antoine
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Tue, 27 Jun 2017
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[ 13:46 sunpoet ] (Only the first 10 of 252 ports in this commit are shown above. )
Update devel/readline to 7.0 patch 3
- Bump PORTREVISION for shlib change
Changes: https://cnswww.cns.cwru.edu/php/chet/readline/CHANGES
https://lists.gnu.org/archive/html/bug-bash/2016-09/msg00107.html
https://lists.gnu.org/archive/html/bug-readline/2017-01/msg00002.html
Differential Revision: https://reviews.freebsd.org/D11172
PR: 219947
Exp-run by: antoine
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Fri, 15 Aug 2014
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[ 16:37 adamw ]
Fix build on -current by un-clobbering LDFLAGS. Also, don't
mute installation commands.
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Tue, 10 Dec 2013
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[ 17:54 bapt ]
Support stage
USE_GMAKE -> USES=gmake
use USES=readline:port
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Fri, 20 Sep 2013
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[ 15:55 bapt ] (Only the first 10 of 94 ports in this commit are shown above. )
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
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Tue, 12 May 2009
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[ 11:28 itetcu ] (Only the first 10 of 20 ports in this commit are shown above. )
Fix LIB_DEPENDS on devel/readline: its sh lib version was bumped recently from
5 to 6.
Forgotten by: araujo@
Reported by: QAT
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Sat, 17 May 2008
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[ 16:52 pav ]
- Update maintainer's email address
Submitted by: Motomichi Matsuzaki <mzaki@m.u-tokyo.ac.jp> (maintainer)
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Sat, 15 Dec 2007
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[ 15:13 miwi ]
MrBayes is a program for the Bayesian estimation of phylogeny.
Bayesian inference of phylogeny is based upon a quantity called the
posterior probability distribution of trees, which is the probability of a
tree conditioned on the observations. The conditioning is accomplished
using Bayes's theorem. The posterior probability distribution of trees is
impossible to calculate analytically; instead, MrBayes uses a simulation
technique called Markov chain Monte Carlo (or MCMC) to approximate the
posterior probabilities of trees.
WWW: http://mrbayes.csit.fsu.edu/
PR: ports/118542
Submitted by: mzaki at biol.s.u-tokyo.ac.jp
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Number of commits found: 16 |