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Port details on branch 2022Q3
p5-Bio-GFF3 Fast low-level functions for parsing and formatting GFF3
2.0_2 biology on this many watch lists=0 search for ports that depend on this port Find issues related to this port Report an issue related to this port View this port on Repology. pkg-fallout 2.0_2Version of this port present on the latest quarterly branch.
Maintainer: perl@FreeBSD.org search for ports maintained by this maintainer
Port Added: 2011-04-22 08:51:49
Last Update: 2022-09-07 21:58:51
Commit Hash: fb16dfe
Also Listed In: perl5
License: ART10 GPLv1+
WWW:
https://metacpan.org/release/Bio-GFF3
Description:
Bio::GFF3 are low-level, fast functions for parsing GFF version 3 files. All they do is convert back and forth between low-level Perl data structures and GFF3 text.
Homepage    cgit ¦ Codeberg ¦ GitHub ¦ GitLab ¦ SVNWeb

Manual pages:
FreshPorts has no man page information for this port.
pkg-plist: as obtained via: make generate-plist
Expand this list (19 items)
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  1. /usr/local/share/licenses/p5-Bio-GFF3-2.0_2/catalog.mk
  2. /usr/local/share/licenses/p5-Bio-GFF3-2.0_2/LICENSE
  3. /usr/local/share/licenses/p5-Bio-GFF3-2.0_2/ART10
  4. /usr/local/share/licenses/p5-Bio-GFF3-2.0_2/GPLv1+
  5. bin/gff3_from_fasta
  6. lib/perl5/site_perl/Bio/GFF3/LowLevel.pm
  7. lib/perl5/site_perl/Bio/GFF3/LowLevel/Parser.pm
  8. lib/perl5/site_perl/Bio/GFF3/LowLevel/Parser/1_0_backcompat.pm
  9. lib/perl5/site_perl/Bio/GFF3/Transform/FromFasta.pm
  10. lib/perl5/site_perl/Bio/GFF3/Transform/SyncDirectives.pm
  11. lib/perl5/site_perl/man/man3/Bio::GFF3::LowLevel.3.gz
  12. lib/perl5/site_perl/man/man3/Bio::GFF3::LowLevel::Parser.3.gz
  13. lib/perl5/site_perl/man/man3/Bio::GFF3::LowLevel::Parser::1_0_backcompat.3.gz
  14. lib/perl5/site_perl/man/man3/Bio::GFF3::Transform::FromFasta.3.gz
  15. lib/perl5/site_perl/man/man3/Bio::GFF3::Transform::SyncDirectives.3.gz
  16. lib/perl5/site_perl/man/man1/gff3_from_fasta.1.gz
  17. @owner
  18. @group
  19. @mode
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Dependency lines:
  • p5-Bio-GFF3>0:biology/p5-Bio-GFF3
To install the port:
cd /usr/ports/biology/p5-Bio-GFF3/ && make install clean
To add the package, run one of these commands:
  • pkg install biology/p5-Bio-GFF3
  • pkg install p5-Bio-GFF3
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.
PKGNAME: p5-Bio-GFF3
Flavors: there is no flavor information for this port.
distinfo:
SHA256 (Bio-GFF3-2.0.tar.gz) = cbfef8376d3d9026483360150e3745a27dad78e995348d0c08ef5b2e4374170c SIZE (Bio-GFF3-2.0.tar.gz) = 74951

Packages (timestamps in pop-ups are UTC):
p5-Bio-GFF3
ABIaarch64amd64armv6armv7i386powerpcpowerpc64powerpc64le
FreeBSD:13:latest2.0_22.0_22.0_22.0_22.0_2-2.0_2-
FreeBSD:13:quarterly2.0_22.0_22.0_22.0_22.0_22.0_22.0_22.0_2
FreeBSD:14:latest2.0_22.0_22.0_22.0_22.0_22.0_2-2.0_2
FreeBSD:14:quarterly2.0_22.0_2-2.0_22.0_22.0_22.0_22.0_2
FreeBSD:15:latest2.0_22.0_2n/a2.0_2n/a2.0_22.0_22.0_2
FreeBSD:15:quarterly--n/a-n/a---
Dependencies
NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
Build dependencies:
  1. p5-File-ReadBackwards>=0 : devel/p5-File-ReadBackwards
  2. p5-List-MoreUtils>=0 : lang/p5-List-MoreUtils
  3. p5-URI>=0 : net/p5-URI
  4. perl5>=5.32.r0<5.33 : lang/perl5.32
  5. perl5>=5.32.r0<5.33 : lang/perl5.32
Runtime dependencies:
  1. p5-File-ReadBackwards>=0 : devel/p5-File-ReadBackwards
  2. p5-List-MoreUtils>=0 : lang/p5-List-MoreUtils
  3. p5-URI>=0 : net/p5-URI
  4. perl5>=5.32.r0<5.33 : lang/perl5.32
There are no ports dependent upon this port

Configuration Options:
No options to configure
Options name:
biology_p5-Bio-GFF3
USES:
perl5
FreshPorts was unable to extract/find any pkg message
Master Sites:
Expand this list (12 items)
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  1. ftp://ftp.auckland.ac.nz/pub/perl/CPAN/modules/by-module/Bio/
  2. ftp://ftp.cpan.org/pub/CPAN/modules/by-module/
  3. ftp://ftp.cpan.org/pub/CPAN/modules/by-module/Bio/
  4. ftp://ftp.funet.fi/pub/languages/perl/CPAN/modules/by-module/Bio/
  5. ftp://ftp.kddlabs.co.jp/lang/perl/CPAN/modules/by-module/Bio/
  6. ftp://ftp.mirrorservice.org/sites/cpan.perl.org/CPAN/modules/by-module/Bio/
  7. http://backpan.perl.org/modules/by-module/Bio/
  8. http://ftp.jaist.ac.jp/pub/CPAN/modules/by-module/Bio/
  9. http://ftp.twaren.net/Unix/Lang/CPAN/modules/by-module/Bio/
  10. https://cpan.metacpan.org/modules/by-module/
  11. https://cpan.metacpan.org/modules/by-module/Bio/
  12. https://www.cpan.org/modules/by-module/Bio/
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There are no commits on branch 2022Q3 for this port