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Why was the website so slow for so long?

The cause of the slowdown was a change to the ZFS dataset. In conjunction with the database server, very little caching was being done. This combination resulted in increased disk I/O as the system churned through the database. Details in the blog post which outlines the various things which changed. Many graphs.

non port: biology/p5-Bio-NEXUS/Makefile
SVNWeb

Number of commits found XX: 15

Sat, 6 Oct 2018
[ 13:06 des ] Original commit   Revision:481365
481365 archivers/p5-Archive-Any-Plugin-Rar/Makefile
481365 archivers/p5-Archive-Any/Makefile
481365 archivers/p5-Archive-Extract-Libarchive/Makefile
481365 archivers/p5-Archive-Peek/Makefile
481365 archivers/p5-Archive-Rar/Makefile
481365 archivers/p5-Archive-SimpleExtractor/Makefile
481365 archivers/p5-Archive-Tar-Wrapper/Makefile
481365 archivers/p5-Compress-LZW/Makefile
481365 archivers/p5-IO-Compress-Lzf/Makefile
481365 archivers/p5-IO-Compress-Lzma/Makefile

(Only the first 10 of 2492 ports in this commit are shown above. View all ports for this commit)
Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except
for where it resulted in a change in output from build-depends-list or
run-depends-list.

Approved by:	portmgr (adamw)
Fri, 1 Apr 2016
[ 13:29 mat ] Original commit   Revision:412344
412344 Mk/Uses/gecko.mk
412344 Mk/bsd.fpc.mk
412344 Mk/bsd.gecko.mk
412344 Mk/bsd.port.mk
412344 accessibility/accerciser/Makefile
412344 accessibility/at-spi/Makefile
412344 accessibility/at-spi2-atk/Makefile
412344 accessibility/at-spi2-core/Makefile
412344 accessibility/caribou/Makefile
412344 accessibility/dasher/Makefile

(Only the first 10 of 1009 ports in this commit are shown above. View all ports for this commit)
Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.

With hat:	portmgr
Sponsored by:	Absolight
Sun, 31 May 2015
[ 13:37 amdmi3 ] Original commit   Revision:388088
388088 audio/p5-MP3-Tag/Makefile
388088 biology/p5-Bio-NEXUS/Makefile
388088 databases/p5-DBD-CSV/Makefile
388088 devel/p5-Data-Walk/Makefile
388088 devel/p5-Every/Makefile
388088 devel/p5-File-Grep/Makefile
388088 devel/p5-Types-Core/Makefile
388088 math/p5-Date-Handler/Makefile
388088 math/p5-Math-FixedPrecision/Makefile
388088 net-p2p/p5-Net-BitTorrent/Makefile

(Only the first 10 of 19 ports in this commit are shown above. View all ports for this commit)
- Add NO_ARCH

Approved by:	portmgr blanket
Wed, 26 Nov 2014
[ 13:08 mat ] Original commit   Revision:373448
373448 CHANGES
373448 Mk/Uses/perl5.mk
373448 Mk/bsd.default-versions.mk
373448 Mk/bsd.port.mk
373448 UPDATING
373448 archivers/dpkg/Makefile
373448 archivers/p5-Archive-Any-Lite/Makefile
373448 archivers/p5-Archive-Any-Lite/pkg-plist
373448 archivers/p5-Archive-Any-Plugin-Rar/Makefile
373448 archivers/p5-Archive-Any-Plugin-Rar/pkg-plist

(Only the first 10 of 10077 ports in this commit are shown above. View all ports for this commit)
Change the way Perl modules are installed, update the default Perl to 5.18.

Before, we had:

  site_perl :           lib/perl5/site_perl/5.18
  site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
  perl_man3 :           lib/perl5/5.18/man/man3

Now we have:

  site_perl : lib/perl5/site_perl
  site_arch : lib/perl5/site_perl/mach/5.18
  perl_man3 : lib/perl5/site_perl/man/man3

Modules without any .so will be installed at the same place regardless of the
(Only the first 15 lines of the commit message are shown above View all of this commit message)
Fri, 31 Jan 2014
[ 12:47 miwi ] Original commit   Revision:341989
341989 benchmarks/polygraph/Makefile
341989 benchmarks/polygraph/pkg-plist
341989 biology/p5-Bio-NEXUS/Makefile
341989 biology/p5-Bio-NEXUS/pkg-plist
341989 devel/p5-Hash-AutoHash/Makefile
341989 devel/p5-Hash-AutoHash/pkg-plist
341989 lang/treecc/Makefile
341989 net/p5-WebService-Dropbox/Makefile
341989 net/p5-WebService-Dropbox/pkg-plist
- Stage support
Fri, 20 Sep 2013
[ 15:55 bapt ] Original commit   Revision:327709
327709 biology/ariadne/Makefile
327709 biology/artemis/Makefile
327709 biology/avida/Makefile
327709 biology/babel/Makefile
327709 biology/biococoa/Makefile
327709 biology/biojava/Makefile
327709 biology/blast/Makefile
327709 biology/blat/Makefile
327709 biology/boinc-simap/Makefile
327709 biology/chemeq/Makefile

(Only the first 10 of 94 ports in this commit are shown above. View all ports for this commit)
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Fri, 2 Aug 2013
[ 18:52 mat ] Original commit   Revision:324174
324174 archivers/p5-Archive-Any/Makefile
324174 archivers/p5-Archive-Extract/Makefile
324174 archivers/p5-Archive-Rar/Makefile
324174 archivers/p5-Archive-SimpleExtractor/Makefile
324174 archivers/p5-Archive-Zip/Makefile
324174 archivers/p5-Compress-LZF/Makefile
324174 archivers/p5-Compress-LZO/Makefile
324174 archivers/p5-Compress-LZW/Makefile
324174 archivers/p5-Mac-Macbinary/Makefile
324174 archivers/p5-POE-Filter-Bzip2/Makefile

(Only the first 10 of 1871 ports in this commit are shown above. View all ports for this commit)
- Convert to new perl framework
- Trim Makefile header
- Remove MAKE_JOBS_SAFE=yes, it's the default.
Fri, 29 Mar 2013
[ 00:44 eadler ] Original commit   Revision:315509
315509 astro/p5-Astro-ADS/Makefile
315509 astro/p5-Astro-Catalog/Makefile
315509 astro/p5-Astro-DSS/Makefile
315509 astro/p5-Astro-SIMBAD-Client/Makefile
315509 astro/p5-Astro-SIMBAD/Makefile
315509 astro/p5-Astro/Makefile
315509 astro/p5-Geo-METAR/Makefile
315509 audio/p5-CDDB/Makefile
315509 audio/p5-CDDB_get/Makefile
315509 audio/p5-Test-Corpus-Audio-MPD/Makefile

(Only the first 10 of 303 ports in this commit are shown above. View all ports for this commit)
For perl@ owned ports:

- Fix COMMENT
- Trim header
Sat, 11 Feb 2012
[ 02:04 sunpoet ] Original commit 
1.7 biology/p5-Bio-NEXUS/Makefile
1.6 biology/p5-Bio-NEXUS/distinfo
1.4 biology/p5-Bio-NEXUS/pkg-plist
- Update to 0.78
- Sort TEST_DEPENDS, MAN1, MAN3 and PLIST

Changes:        http://search.cpan.org/dist/Bio-NEXUS/doc/changes.txt
Thu, 9 Feb 2012
[ 01:23 wen ] Original commit 
1.6 biology/p5-Bio-NEXUS/Makefile
1.5 biology/p5-Bio-NEXUS/distinfo
1.3 biology/p5-Bio-NEXUS/pkg-plist
- Update to 0.77
Sat, 21 Jan 2012
[ 17:40 eadler ] Original commit 
1.13 astro/p5-Astro-Catalog/Makefile
1.11 astro/p5-Astro-SunTime/Makefile
1.7 astro/py-RO/Makefile
1.10 astro/py-aipy/Makefile
1.3 astro/py-pyfits/Makefile
1.8 audio/calf/Makefile
1.30 audio/gnupod/Makefile
1.3 audio/jack_mixer/Makefile
1.61 audio/muine/Makefile
1.8 audio/p5-Audio-Scrobbler/Makefile

(Only the first 10 of 1326 ports in this commit are shown above. View all ports for this commit)
At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450
ports use BUILD_DEPENDS:= ${RUN_DEPENDS}. This patch fixes ports that are
currently broken. This is a temporary measure until we organically stop using
:= or someone(s) spend a lot of time changing all the ports over.

Explicit duplication > := > = and this just moves ports one step to the left

Approved by:    portmgr
Sat, 25 Dec 2010
[ 16:55 sunpoet ] Original commit 
1.7 archivers/epkg/Makefile
1.2 archivers/epkg/distinfo
1.18 audio/p5-CDDB/Makefile
1.14 audio/p5-CDDB/distinfo
1.4 benchmarks/phoronix-test-suite/Makefile
1.2 benchmarks/phoronix-test-suite/distinfo
1.28 benchmarks/polygraph31/Makefile
1.11 benchmarks/polygraph31/distinfo
1.4 biology/p5-Bio-NEXUS/Makefile
1.4 biology/p5-Bio-NEXUS/distinfo

(Only the first 10 of 180 ports in this commit are shown above. View all ports for this commit)
- Use canonical format for FreeBSD.org MAINTAINER addresses
- Remove obsolete MD5 checksum while I'm here

PR:             ports/152844
Submitted by:   sunpoet (myself)
Approved by:    miwi (with portmgr hat)
Sat, 25 Sep 2010
[ 08:14 wen ] Original commit 
1.3 biology/p5-Bio-NEXUS/Makefile
1.3 biology/p5-Bio-NEXUS/distinfo
- Update to 0.76
Tue, 7 Sep 2010
[ 07:15 wen ] Original commit 
1.2 biology/p5-Bio-NEXUS/Makefile
1.2 biology/p5-Bio-NEXUS/distinfo
1.2 biology/p5-Bio-NEXUS/pkg-plist
- Update to 0.75
- Reset maintainer to perl@
Sat, 22 Aug 2009
[ 20:39 miwi ] Original commit 
1.112 biology/Makefile
1.1 biology/p5-Bio-NEXUS/Makefile
1.1 biology/p5-Bio-NEXUS/distinfo
1.1 biology/p5-Bio-NEXUS/pkg-descr
1.1 biology/p5-Bio-NEXUS/pkg-plist
Bio::NEXUS package provides an object-oriented, Perl-based
applications programming interface (API) to the NEXUS file
format of Maddison, et al., 1997 (Syst. Biol. 46:590-621).
NEXUS is a powerful and extensible format designed for use
in evolutionary analysis, including the analysis of molecular
sequence data as well as classical morphological and life-history
data. NEXUS is the input or output format for software such as
PAUP*, MacClade, Mesquite, SIMMAP, MrBayes, Nexplorer, and
so on.  This package also contains the demonstration applications
nexplot.pl (plot character data with a tree) and nextool.pl
(allowing programmatic editing, e.g., selecting particular
clades or subsets of data).

WWW: http://search.cpan.org/dist/Bio-NEXUS/

PR:             ports/137983
Submitted by:   Wen Heping <wenheping at gmail.com>

Number of commits found XX: 15

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