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non port: biology/p5-Bio-NEXUS/Makefile
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Number of commits found: 18

Wed, 7 Sep 2022
[ 21:10 Stefan E├čer (se) search for other commits by this committer ]    commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52  commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52  commit hash:b7f05445c00f2625aa19b4154ebcbce5ed2daa52  b7f0544  (Only the first 10 of 27931 ports in this commit are shown above. View all ports for this commit)
Add WWW entries to port Makefiles

It has been common practice to have one or more URLs at the end of the
ports' pkg-descr files, one per line and prefixed with "WWW:". These
URLs should point at a project website or other relevant resources.

Access to these URLs required processing of the pkg-descr files, and
they have often become stale over time. If more than one such URL was
present in a pkg-descr file, only the first one was tarnsfered into
the port INDEX, but for many ports only the last line did contain the
port specific URL to further information.

There have been several proposals to make a project URL available as
a macro in the ports' Makefiles, over time.
(Only the first 15 lines of the commit message are shown above View all of this commit message)
Wed, 20 Jul 2022
[ 14:20 Tobias C. Berner (tcberner) search for other commits by this committer ]    commit hash:37526bbd4e50616d87f70e1c788ae4895d88d671  commit hash:37526bbd4e50616d87f70e1c788ae4895d88d671  commit hash:37526bbd4e50616d87f70e1c788ae4895d88d671  37526bb  (Only the first 10 of 82 ports in this commit are shown above. View all ports for this commit)
biology: remove 'Created by' lines

A big Thank You to the original contributors of these ports:

  *  Aaron Dalton <aaron@FreeBSD.org>
  *  Akinori MUSHA aka knu <knu@idaemons.org>
  *  Andrey Zakhvatov
  *  Bob Zimmermann <rpz@cse.wustl.edu>
  *  Camson Huynh <chuynh@biolateral.com.au>
  *  Dan Siercks <dsiercks@uwm.edu>
  *  Fernan Aguero <fernan@iib.unsam.edu.ar>
  *  Hannes Hauswedell <h2+fbsdports@fsfe.org>
  *  J. Bacon <jwb@FreeBSD.org>
  *  Jason Bacon <jwb@FreeBSD.org>
  *  Jeremy <karlj000@unbc.ca>
(Only the first 15 lines of the commit message are shown above View all of this commit message)
Tue, 6 Apr 2021
[ 14:31 Mathieu Arnold (mat) search for other commits by this committer ]    commit hash:305f148f482daf30dcf728039d03d019f88344eb  commit hash:305f148f482daf30dcf728039d03d019f88344eb  commit hash:305f148f482daf30dcf728039d03d019f88344eb  305f148  (Only the first 10 of 29333 ports in this commit are shown above. View all ports for this commit)
Remove # $FreeBSD$ from Makefiles.
Sat, 6 Oct 2018
[ 13:06 des search for other commits by this committer ] Original commit   Revision:481365 (Only the first 10 of 2492 ports in this commit are shown above. View all ports for this commit)
Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except
for where it resulted in a change in output from build-depends-list or
run-depends-list.

Approved by:	portmgr (adamw)
Fri, 1 Apr 2016
[ 13:29 mat search for other commits by this committer ] Original commit   Revision:412344 (Only the first 10 of 1009 ports in this commit are shown above. View all ports for this commit)
Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.

With hat:	portmgr
Sponsored by:	Absolight
Sun, 31 May 2015
[ 13:37 amdmi3 search for other commits by this committer ] Original commit   Revision:388088 (Only the first 10 of 19 ports in this commit are shown above. View all ports for this commit)
- Add NO_ARCH

Approved by:	portmgr blanket
Wed, 26 Nov 2014
[ 13:08 mat search for other commits by this committer ] Original commit   Revision:373448 (Only the first 10 of 10077 ports in this commit are shown above. View all ports for this commit)
Change the way Perl modules are installed, update the default Perl to 5.18.

Before, we had:

  site_perl :           lib/perl5/site_perl/5.18
  site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
  perl_man3 :           lib/perl5/5.18/man/man3

Now we have:

  site_perl : lib/perl5/site_perl
  site_arch : lib/perl5/site_perl/mach/5.18
  perl_man3 : lib/perl5/site_perl/man/man3

Modules without any .so will be installed at the same place regardless of the
(Only the first 15 lines of the commit message are shown above View all of this commit message)
Fri, 31 Jan 2014
[ 12:47 miwi search for other commits by this committer ] Original commit   Revision:341989
- Stage support
Fri, 20 Sep 2013
[ 15:55 bapt search for other commits by this committer ] Original commit   Revision:327709 (Only the first 10 of 94 ports in this commit are shown above. View all ports for this commit)
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
Fri, 2 Aug 2013
[ 18:52 mat search for other commits by this committer ] Original commit   Revision:324174 (Only the first 10 of 1871 ports in this commit are shown above. View all ports for this commit)
- Convert to new perl framework
- Trim Makefile header
- Remove MAKE_JOBS_SAFE=yes, it's the default.
Fri, 29 Mar 2013
[ 00:44 eadler search for other commits by this committer ] Original commit   Revision:315509 (Only the first 10 of 303 ports in this commit are shown above. View all ports for this commit)
For perl@ owned ports:

- Fix COMMENT
- Trim header
Sat, 11 Feb 2012
[ 02:04 sunpoet search for other commits by this committer ] Original commit 
- Update to 0.78
- Sort TEST_DEPENDS, MAN1, MAN3 and PLIST

Changes:        http://search.cpan.org/dist/Bio-NEXUS/doc/changes.txt
Thu, 9 Feb 2012
[ 01:23 wen search for other commits by this committer ] Original commit 
- Update to 0.77
Sat, 21 Jan 2012
[ 17:40 eadler search for other commits by this committer ] Original commit  (Only the first 10 of 1326 ports in this commit are shown above. View all ports for this commit)
At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450
ports use BUILD_DEPENDS:= ${RUN_DEPENDS}. This patch fixes ports that are
currently broken. This is a temporary measure until we organically stop using
:= or someone(s) spend a lot of time changing all the ports over.

Explicit duplication > := > = and this just moves ports one step to the left

Approved by:    portmgr
Sat, 25 Dec 2010
[ 16:55 sunpoet search for other commits by this committer ] Original commit  (Only the first 10 of 180 ports in this commit are shown above. View all ports for this commit)
- Use canonical format for FreeBSD.org MAINTAINER addresses
- Remove obsolete MD5 checksum while I'm here

PR:             ports/152844
Submitted by:   sunpoet (myself)
Approved by:    miwi (with portmgr hat)
Sat, 25 Sep 2010
[ 08:14 wen search for other commits by this committer ] Original commit 
- Update to 0.76
Tue, 7 Sep 2010
[ 07:15 wen search for other commits by this committer ] Original commit 
- Update to 0.75
- Reset maintainer to perl@
Sat, 22 Aug 2009
[ 20:39 miwi search for other commits by this committer ] Original commit 
Bio::NEXUS package provides an object-oriented, Perl-based
applications programming interface (API) to the NEXUS file
format of Maddison, et al., 1997 (Syst. Biol. 46:590-621).
NEXUS is a powerful and extensible format designed for use
in evolutionary analysis, including the analysis of molecular
sequence data as well as classical morphological and life-history
data. NEXUS is the input or output format for software such as
PAUP*, MacClade, Mesquite, SIMMAP, MrBayes, Nexplorer, and
so on.  This package also contains the demonstration applications
nexplot.pl (plot character data with a tree) and nextool.pl
(allowing programmatic editing, e.g., selecting particular
clades or subsets of data).

WWW: http://search.cpan.org/dist/Bio-NEXUS/

PR:             ports/137983
Submitted by:   Wen Heping <wenheping at gmail.com>

Number of commits found: 18