| non port: biology/p5-bioperl-run/Makefile |
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SVNWeb
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Number of commits found: 26 |
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Fri, 1 Apr 2016
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[ 13:29 mat  ]   (Only the first 10 of 1009 ports in this commit are shown above.  )
Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.
With hat: portmgr
Sponsored by: Absolight
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Fri, 20 Mar 2015
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[ 09:43 mat ]
Convert to new USE_GITHUB.
While there, cleanup.
Sponsored by: Absolight
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Thu, 12 Mar 2015
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[ 23:00 adamw ] (Only the first 10 of 229 ports in this commit are shown above. )
Some OCD cleanups on some of the perl@ ports.
- Remove dependencies in core
- Put testing depends in TEST_DEPENDS
- Remove unnecessary bsd.port.options.mk inclusions
- Remove checks for Perl versions that no longer exist in the ports tree
- Sort plists, some of which were so jumbled that I have to assume
the plist was randomized before committing
A lot of the plist changes in this commit are moving PERL5_MAN3 after
SITE_PERL. It's repo churn now, but it makes updating the ports later
far easier.
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Sun, 18 Jan 2015
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[ 22:49 sunpoet ]
- Simplify Makefile
- Use tab instead of space
- Sort PLIST
- Pass maintainership to perl@
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Wed, 26 Nov 2014
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[ 13:08 mat ] (Only the first 10 of 10077 ports in this commit are shown above. )
Change the way Perl modules are installed, update the default Perl to 5.18.
Before, we had:
site_perl : lib/perl5/site_perl/5.18
site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
perl_man3 : lib/perl5/5.18/man/man3
Now we have:
site_perl : lib/perl5/site_perl
site_arch : lib/perl5/site_perl/mach/5.18
perl_man3 : lib/perl5/site_perl/man/man3
Modules without any .so will be installed at the same place regardless of the (Only the first 15 lines of the commit message are shown above )
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Mon, 4 Aug 2014
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[ 08:54 pi ]
biology/p5-bioperl-run: 1.6.1 -> 1.6.901, unbreak, stagify
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Wed, 23 Jul 2014
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[ 16:44 bapt ] (Only the first 10 of 55 ports in this commit are shown above. )
Reset maintainership for ports not staged with no pending PR
With hat: portmgr
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Thu, 19 Jun 2014
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[ 21:31 antoine ]
Mark BROKEN: Fails to configure
===> Configuring for p5-bioperl-run-1.6.1_4
Invalid prerequisite condition '0/processing XML
data/Bio::Tools::Run::EMBOSSacd' for XML::Twig at
/usr/local/lib/perl5/site_perl/5.16/Module/Build/Base.pm line 1702.
*** [do-configure] Error code 25
Reported by: pkg-fallout
With hat: portmgr
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Fri, 21 Feb 2014
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[ 13:35 ehaupt ]
Remove trailing whitespaces from category biology
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Mon, 10 Feb 2014
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[ 13:54 ehaupt ] (Only the first 10 of 581 ports in this commit are shown above. )
According to the Porter's Handbook (5.12.2.3.) default options must be added to
OPTIONS_DEFINE. This policy has been implemented only recently that's why we
have many ports violating this policy.
This patch adds the default options specified in the Porter's Handbook to
OPTIONS_DEFINE where they are being used. Ports maintained by
gnome@FreeBSD.org, kde@FreeBSD.org and x11@FreeBSD.org have been excluded.
Approved by: portmgr (bapt)
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Fri, 3 Jan 2014
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[ 15:46 adamw ] (Only the first 10 of 14 ports in this commit are shown above. )
Convert biology to MDOCS and MEXAMPLES
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Fri, 20 Sep 2013
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[ 15:55 bapt ] (Only the first 10 of 94 ports in this commit are shown above. )
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
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Sat, 7 Sep 2013
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[ 07:44 az ] (Only the first 10 of 19 ports in this commit are shown above. )
- convert to the new perl5 framework
Approved by: portmgr (bapt@, blanket)
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Sat, 30 Jun 2012
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[ 14:48 az ] (Only the first 10 of 24 ports in this commit are shown above. )
- Remove SITE_PERL from *_DEPENDS
Approved by: portmgr@ (bapt@)
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Fri, 1 Jun 2012
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[ 05:26 dinoex ] (Only the first 10 of 4371 ports in this commit are shown above. )
- update png to 1.5.10
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Sat, 21 Jan 2012
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[ 17:40 eadler ] (Only the first 10 of 1326 ports in this commit are shown above. )
At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450
ports use BUILD_DEPENDS:= ${RUN_DEPENDS}. This patch fixes ports that are
currently broken. This is a temporary measure until we organically stop using
:= or someone(s) spend a lot of time changing all the ports over.
Explicit duplication > := > = and this just moves ports one step to the left
Approved by: portmgr
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Sun, 28 Mar 2010
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[ 06:47 dinoex ] (Only the first 10 of 4470 ports in this commit are shown above. )
- update to 1.4.1
Reviewed by: exp8 run on pointyhat
Supported by: miwi
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Fri, 5 Feb 2010
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[ 11:46 dinoex ] (Only the first 10 of 4271 ports in this commit are shown above. )
- update to jpeg-8
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Sun, 2 Aug 2009
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[ 20:00 pav ]
- Relax check on bioperl version; people keep forgetting to update this check
when updating bioperl port
Reported by: pointyhat
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Fri, 31 Jul 2009
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[ 13:57 dinoex ] (Only the first 10 of 3009 ports in this commit are shown above. )
- bump all port that indirectly depends on libjpeg and have not yet been bumped
or updated
Requested by: edwin
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Thu, 19 Mar 2009
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[ 20:54 miwi ]
- Update to 1.6.1
PR: 132122
Submitted by: Wen Heping <wenheping@gmail.com>
Approved by: maintainer
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Thu, 15 Jan 2009
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[ 22:47 pav ]
- Unbreak after p5-bioperl changed portrevision
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Thu, 17 Apr 2008
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[ 14:30 araujo ] (Only the first 10 of 2168 ports in this commit are shown above. )
- Take advantage of CPAN macro from bsd.sites.mk, change
${MASTER_SITE_PERL_CPAN} to CPAN.
PR: ports/122674
Submitted by: Philip M. Gollucci <pgollucci@p6m7g8.com>
Reworked by: araujo (myself)
Approved by: portmgr (pav)
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Sat, 8 Sep 2007
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[ 00:53 linimon ] (Only the first 10 of 30 ports in this commit are shown above. )
Welcome bsd.perl.mk. Add support for constructs such as USE_PERL5=5.8.0+.
Drop support for antique perl.
Work done by: gabor
Sponsored by: Google Summer of Code 2007
Hat: portmgr
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Sat, 19 May 2007
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[ 20:32 flz ] (Only the first 10 of 7868 ports in this commit are shown above. )
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
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Tue, 2 May 2006
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[ 21:30 garga ]
Bioperl-run contain modules that provides a PERL interface to various
bioinformatics applications. This allows various applications to be used
with common Bioperl objects.
WWW: http://bioperl.org/
PR: ports/93674
Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
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Number of commits found: 26 |
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