| non port: biology/p5-bioperl/Makefile |
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SVNWeb
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Number of commits found: 46 |
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Sun, 20 Nov 2016
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[ 23:56 sunpoet  ]  
- Remove unnecessary USES=shebangfix
- Convert to new options target helper
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Fri, 1 Apr 2016
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[ 13:29 mat ] (Only the first 10 of 1009 ports in this commit are shown above.  )
Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.
With hat: portmgr
Sponsored by: Absolight
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Sat, 30 May 2015
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[ 12:32 amdmi3 ]
- Fix shebangs
- Add NO_ARCH
- Add missing EXAMPLES option
Approved by: portmgr blanket
MFH: 2015Q2
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Fri, 8 May 2015
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[ 18:12 adamw ]
Reassign biology/ perl modules to perl@.
While here:
Regenerate p5-AcePerl's patches using makepatch.
Make p5-Bio-ASN1-EntrezGene depend on p5-bioperl, instead of the
other way around. Bump PORTREVISION on those two ports.
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Thu, 12 Mar 2015
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[ 23:00 adamw ] (Only the first 10 of 229 ports in this commit are shown above. )
Some OCD cleanups on some of the perl@ ports.
- Remove dependencies in core
- Put testing depends in TEST_DEPENDS
- Remove unnecessary bsd.port.options.mk inclusions
- Remove checks for Perl versions that no longer exist in the ports tree
- Sort plists, some of which were so jumbled that I have to assume
the plist was randomized before committing
A lot of the plist changes in this commit are moving PERL5_MAN3 after
SITE_PERL. It's repo churn now, but it makes updating the ports later
far easier.
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Wed, 26 Nov 2014
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[ 13:08 mat ] (Only the first 10 of 10077 ports in this commit are shown above. )
Change the way Perl modules are installed, update the default Perl to 5.18.
Before, we had:
site_perl : lib/perl5/site_perl/5.18
site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
perl_man3 : lib/perl5/5.18/man/man3
Now we have:
site_perl : lib/perl5/site_perl
site_arch : lib/perl5/site_perl/mach/5.18
perl_man3 : lib/perl5/site_perl/man/man3
Modules without any .so will be installed at the same place regardless of the (Only the first 15 lines of the commit message are shown above )
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Sun, 27 Jul 2014
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[ 07:27 wen ]
- Update to 1.6.924 [1]
- Reset maintainer to perl@
PR: 192088 [1]
Submitted by: Kurt Jaeger<pi@FreeBSD.org> [1]
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Fri, 30 May 2014
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[ 15:46 wen ]
- Update to 1.6.923
- Add STAGE support
PR: 190342
Submitted by: Muhammad Moinur Rahman <5u623l20@gmail.com>
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Wed, 9 Apr 2014
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[ 09:49 bapt ] (Only the first 10 of 17 ports in this commit are shown above. )
Mark as broken unstaged perl ports
With hat: portmgr
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Fri, 21 Feb 2014
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[ 13:35 ehaupt ]
Remove trailing whitespaces from category biology
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Mon, 10 Feb 2014
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[ 13:54 ehaupt ] (Only the first 10 of 581 ports in this commit are shown above. )
According to the Porter's Handbook (5.12.2.3.) default options must be added to
OPTIONS_DEFINE. This policy has been implemented only recently that's why we
have many ports violating this policy.
This patch adds the default options specified in the Porter's Handbook to
OPTIONS_DEFINE where they are being used. Ports maintained by
gnome@FreeBSD.org, kde@FreeBSD.org and x11@FreeBSD.org have been excluded.
Approved by: portmgr (bapt)
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Fri, 3 Jan 2014
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[ 15:46 adamw ] (Only the first 10 of 14 ports in this commit are shown above. )
Convert biology to MDOCS and MEXAMPLES
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Fri, 20 Sep 2013
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[ 15:55 bapt ] (Only the first 10 of 94 ports in this commit are shown above. )
Add NO_STAGE all over the place in preparation for the staging support (cat:
biology)
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Tue, 6 Aug 2013
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[ 08:50 az ] (Only the first 10 of 32 ports in this commit are shown above. )
- Convert to new perl framework
- Trim Makefile header
Approved by: wen@ (maintainer)
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Fri, 7 Jun 2013
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[ 06:51 az ]
- Avoid of using SITE_PERL
- Remove depend on DB_File.pm since it part of perl distribution
PR: ports/178877
Submitted by: az
Approved by: matainer (timeout)
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Mon, 1 Oct 2012
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[ 14:55 wen ]
- Take maintainership
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[ 14:45 tabthorpe ] (Only the first 10 of 47 ports in this commit are shown above. )
- Reassign to the heap at maintainer's request
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Sat, 30 Jun 2012
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[ 05:21 az ]
- Remove SITE_PERL from *_DEPENDS
Approved by: portmgr@ (bapt@)
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Fri, 1 Jun 2012
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[ 05:26 dinoex ] (Only the first 10 of 4371 ports in this commit are shown above. )
- update png to 1.5.10
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Sat, 21 Jan 2012
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[ 17:40 eadler ] (Only the first 10 of 1326 ports in this commit are shown above. )
At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450
ports use BUILD_DEPENDS:= ${RUN_DEPENDS}. This patch fixes ports that are
currently broken. This is a temporary measure until we organically stop using
:= or someone(s) spend a lot of time changing all the ports over.
Explicit duplication > := > = and this just moves ports one step to the left
Approved by: portmgr
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Sun, 28 Mar 2010
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[ 06:47 dinoex ] (Only the first 10 of 4470 ports in this commit are shown above. )
- update to 1.4.1
Reviewed by: exp8 run on pointyhat
Supported by: miwi
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Fri, 5 Feb 2010
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[ 11:46 dinoex ] (Only the first 10 of 4271 ports in this commit are shown above. )
- update to jpeg-8
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Fri, 29 Jan 2010
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[ 14:52 kuriyama ] (Only the first 10 of 11 ports in this commit are shown above. )
- Remove unneeded dependencies which is in perl-5.8.9 dist
(part 19; last!).
Approved by: portmgr (itetcu)
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Fri, 4 Dec 2009
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[ 11:50 wen ]
- Update to 1.6.1
Approved by: maintainer (via Email)
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Fri, 31 Jul 2009
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[ 13:57 dinoex ] (Only the first 10 of 3009 ports in this commit are shown above. )
- bump all port that indirectly depends on libjpeg and have not yet been bumped
or updated
Requested by: edwin
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Wed, 22 Jul 2009
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[ 16:27 pgollucci ] (Only the first 10 of 263 ports in this commit are shown above. )
- lang/perl5.6 is dead, remove PERL_LEVEL/PERL_VERSION < 500801 checks
PR: ports/135398
Tested by: 2 -exp runs by pav
Approved by: portmgr (pav)
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Thu, 5 Mar 2009
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[ 17:56 skv ] (Only the first 10 of 11 ports in this commit are shown above. )
Remove variable PERL_VER from the ports tree at all - because
it is obsolete since Perl 5.6.0.
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Mon, 23 Feb 2009
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[ 19:31 garga ]
- Update to 1.6.0
PR: ports/131989
Submitted by: maintainer
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Wed, 14 Jan 2009
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[ 14:51 tobez ]
Fix plist with perl 5.8.9.
Approved by: portmgr (pav, implicit)
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Thu, 17 Apr 2008
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[ 14:30 araujo ] (Only the first 10 of 2168 ports in this commit are shown above. )
- Take advantage of CPAN macro from bsd.sites.mk, change
${MASTER_SITE_PERL_CPAN} to CPAN.
PR: ports/122674
Submitted by: Philip M. Gollucci <pgollucci@p6m7g8.com>
Reworked by: araujo (myself)
Approved by: portmgr (pav)
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Sat, 8 Sep 2007
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[ 00:53 linimon ] (Only the first 10 of 30 ports in this commit are shown above. )
Welcome bsd.perl.mk. Add support for constructs such as USE_PERL5=5.8.0+.
Drop support for antique perl.
Work done by: gabor
Sponsored by: Google Summer of Code 2007
Hat: portmgr
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Sat, 19 May 2007
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[ 20:32 flz ] (Only the first 10 of 7868 ports in this commit are shown above. )
- Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
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Sun, 4 Dec 2005
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[ 22:11 edwin ]
Add conflicst:
CONFLICTS= p5-bioperl-1.[13579]*
Submitted by: Mauricio Herrera Cuadra <arareko@yahoo.com>,Fernan Aguero
<fernan@iib.unsam.edu.ar>
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Fri, 3 Sep 2004
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[ 17:04 leeym ]
- add missing MAN1 and MAN3
- apply DATADIR, EXAMPLESDIR, and DOCSDIR in PLIST
- update the usage of NOPORTDOCS
PR: 71322
Submitted by: leeym
Approved by: Fernan Aguero <fernan@iib.unsam.edu.ar>
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Thu, 12 Aug 2004
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[ 12:48 mat ] (Only the first 10 of 27 ports in this commit are shown above. )
After devel/p5-File-Temp has gained an IGNORE for PERL_LEVEL > 500800, all
these ports were broken because they always depended on it. I've rearranged all
the dependencies to fit the new scheme.
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Mon, 8 Mar 2004
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[ 03:29 linimon ]
Unmark as broken for 4.x; instead, mark as ignore for perl < 5.6.
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Sun, 22 Feb 2004
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[ 00:06 kris ]
BROKEN on 4.x: Configure fails
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Wed, 21 Jan 2004
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[ 08:34 linimon ]
Major update from 0.7.2 to 1.4 by new maintainer. This is almost a complete
rework of the port.
See the page http://news.open-bio.org/archives/cat_bioperl.html for the
changes between 1.2 and 1.4. The older changes are in the CVS tree.
From the new maintainer:
Note that this new port just handles the installation of bioperl and
not of additional extra stuff (bioperl-gui, bioperl-corba-server,
bioperl-corba-client). This is unlike the behaviour of the current
port.
The extra stuff, though still functional, had very little adoption
among users, and does not appear to be currently supported/maintained.
PR: ports/47303 (and subsequent)
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (new maintainer)
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Fri, 24 Oct 2003
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[ 12:05 ijliao ] (Only the first 10 of 1501 ports in this commit are shown above. )
utilize SITE_PERL
PR: 58166
Submitted by: Cheng-Lung Sung <clsung@dragon2.net>
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Fri, 7 Mar 2003
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[ 05:56 ade ] (Only the first 10 of 28 ports in this commit are shown above. )
Clear moonlight beckons.
Requiem mors pacem pkg-comment,
And be calm ports tree.
E Nomini Patri, E Fili, E Spiritu Sancti.
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Fri, 25 Jan 2002
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[ 11:46 wjv ]
- Update to version 0.7.2, somewhat overdue. :-)
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Mon, 13 Aug 2001
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[ 11:26 wjv ]
- Properly list run-time dependencies in RUN_DEPENDS in Makefile. - Deploy
%%PERL_VER%% and %%PERL_ARCH%% pragmas consistently throughout pkg-plist.
(Ouch, that was embarrassing.) - Bump PORTREVISION due to the above. -
Update my email address and the project's URL in pkg-descr.
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Wed, 4 Jul 2001
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[ 14:22 wjv ]
- Update to version 0.7.1 - Add a build-time message to inform the user of
available options.
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Tue, 26 Jun 2001
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[ 16:09 wjv ]
Embarrassingly long overdue update to 0.7.0, including optional support for
GUI (Tk) and CORBA extensions.
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Fri, 13 Oct 2000
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[ 13:43 jeh ]
Update to version 0.6.2
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Fri, 28 Jul 2000
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[ 15:06 nbm ]
Add BioPerl, a collection of Perl5 mods for bioinformatics/genomics
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Number of commits found: 46 |
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