| non port: biology/pbbam/Makefile |
|
SVNWeb
|
Number of commits found XX: 12 | |
Mon, 3 Aug 2020
|
[ 17:40 jwb ]  
544090 biology/bcftools/Makefile
544090 biology/cufflinks/Makefile
544090 biology/htslib/Makefile
544090 biology/htslib/distinfo
544090 biology/htslib/files/patch-Makefile
544090 biology/htslib/files/patch-hfile__libcurl.c
544090 biology/htslib/pkg-plist
544090 biology/jellyfish/Makefile
544090 biology/pbbam/Makefile
544090 biology/samtools/Makefile
(Only the first 10 of 12 ports in this commit are shown above.  )
biology/htslib: Upgrade to 1.10.2
Numerous bug fixes and enhancements since 1.9:
https://github.com/samtools/htslib/tags
Bump PORTREVISION on dependents that don't require additional patching
PR: 248089
|
|
Wed, 11 Dec 2019
|
[ 17:53 jbeich ]
519824 archivers/innoextract/Makefile
519824 archivers/tardy/Makefile
519824 astro/libkgeomap/Makefile
519824 astro/libosmium/Makefile
519824 audio/ardour/Makefile
519824 audio/ardour5/Makefile
519824 audio/clementine-player/Makefile
519824 audio/cpp-xmms2/Makefile
519824 audio/csound/Makefile
519824 audio/faust-lv2/Makefile
(Only the first 10 of 417 ports in this commit are shown above. )
devel/boost-*: update to 1.72.0
Changes: http://www.boost.org/users/history/version_1_72_0.html
PR: 241449
Exp-run by: antoine
Differential Revision: https://reviews.freebsd.org/D22136
|
|
Sun, 24 Nov 2019
|
[ 15:53 jwb ]
518334 biology/pbbam/Makefile
518334 biology/pbcopper/Makefile
518334 biology/pbseqan/Makefile
518334 biology/unanimity/Makefile
biology/unanimity and dependencies: Flag as no longer open source
PacBio now provides unanimity only as a binary package through bioconda.
See https://github.com/PacificBiosciences/ccs.
|
|
Mon, 19 Aug 2019
|
[ 15:35 jbeich ]
509290 archivers/innoextract/Makefile
509290 archivers/tardy/Makefile
509290 astro/libkgeomap/Makefile
509290 astro/libosmium/Makefile
509290 audio/ardour/Makefile
509290 audio/ardour5/Makefile
509290 audio/clementine-player/Makefile
509290 audio/cpp-xmms2/Makefile
509290 audio/csound/Makefile
509290 audio/faust-lv2/Makefile
(Only the first 10 of 412 ports in this commit are shown above. )
devel/boost-*: update to 1.71.0
Changes: http://www.boost.org/users/history/version_1_71_0.html
PR: 238827
Exp-run by: antoine
Differential Revision: https://reviews.freebsd.org/D20774
|
|
Fri, 26 Jul 2019
|
[ 20:46 gerald ]
507372 Mk/bsd.ruby.mk
507372 accessibility/atkmm/Makefile
507372 accessibility/kmag/Makefile
507372 accessibility/kmousetool/Makefile
507372 accessibility/kmouth/Makefile
507372 accessibility/libqaccessibilityclient/Makefile
507372 accessibility/qt5-speech/Makefile
507372 archivers/R-cran-zip/Makefile
507372 archivers/ark/Makefile
507372 archivers/brotli/Makefile
(Only the first 10 of 3853 ports in this commit are shown above. )
Bump PORTREVISION for ports depending on the canonical version of GCC
as defined in Mk/bsd.default-versions.mk which has moved from GCC 8.3
to GCC 9.1 under most circumstances now after revision 507371.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, everything INDEX-11 shows with a dependency on lang/gcc9 now.
PR: 238330
|
|
Fri, 12 Apr 2019
|
[ 06:36 jbeich ]
498698 archivers/innoextract/Makefile
498698 archivers/tardy/Makefile
498698 astro/libkgeomap/Makefile
498698 astro/libosmium/Makefile
498698 audio/ardour/Makefile
498698 audio/ardour5/Makefile
498698 audio/clementine-player/Makefile
498698 audio/cpp-xmms2/Makefile
498698 audio/csound/Makefile
498698 audio/faust-lv2/Makefile
(Only the first 10 of 392 ports in this commit are shown above. )
devel/boost-*: update to 1.70.0
Changes: http://www.boost.org/users/history/version_1_70_0.html
PR: 235956
Exp-run by: antoine
Differential Revision: https://reviews.freebsd.org/D19303
|
|
Tue, 19 Feb 2019
|
[ 23:03 jwb ]
493399 biology/pbbam/Makefile
493399 biology/pbbam/distinfo
493399 biology/pbbam/files
493399 biology/pbbam/files/patch-meson__options.txt
493399 biology/pbbam/pkg-plist
biology/pbbam: Upgrade to 0.18.0 release
In preparation for unanimity upgrade
|
|
Wed, 12 Dec 2018
|
[ 01:35 gerald ]
487272 Mk/bsd.ruby.mk
487272 accessibility/atkmm/Makefile
487272 accessibility/kmag/Makefile
487272 accessibility/kmousetool/Makefile
487272 accessibility/kmouth/Makefile
487272 accessibility/qt5-speech/Makefile
487272 archivers/R-cran-zip/Makefile
487272 archivers/ark/Makefile
487272 archivers/brotli/Makefile
487272 archivers/c-blosc/Makefile
(Only the first 10 of 3168 ports in this commit are shown above. )
Bump PORTREVISION for ports depending on the canonical version of GCC
defined via Mk/bsd.default-versions.mk which has moved from GCC 7.4 t
GCC 8.2 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c11, c++0x, c++11-lang,
c++11-lib, c++14-lang, c++17-lang, or gcc-c++11-lib
plus, as a double check, everything INDEX-11 showed depending on lang/gcc7.
PR: 231590
|
[ 00:15 jbeich ]
487266 archivers/innoextract/Makefile
487266 archivers/tardy/Makefile
487266 astro/libkgeomap-kde4/Makefile
487266 astro/libkgeomap/Makefile
487266 astro/libosmium/Makefile
487266 audio/ardour/Makefile
487266 audio/ardour5/Makefile
487266 audio/clementine-player/Makefile
487266 audio/cpp-xmms2/Makefile
487266 audio/csound/Makefile
(Only the first 10 of 415 ports in this commit are shown above. )
devel/boost-*: update to 1.69.0
Changes: http://www.boost.org/users/history/version_1_69_0.html
PR: 232525
Exp-run by: antoine
Differential Revision: https://reviews.freebsd.org/D17645
|
|
Tue, 18 Sep 2018
|
[ 08:14 linimon ]
479990 audio/nuvolaplayer/Makefile
479990 audio/sherlock-lv2/Makefile
479990 biology/pbbam/Makefile
479990 biology/pbcopper/Makefile
479990 biology/unanimity/Makefile
479990 cad/freehdl/Makefile
479990 databases/p5-Tie-LevelDB/Makefile
479990 databases/pointcloud/Makefile
479990 devel/icmake/Makefile
479990 games/atanks/Makefile
(Only the first 10 of 22 ports in this commit are shown above. )
More precisely specify USES=compiler to fix build on gcc-based
platforms such as powerpc64.
Tested on powerpc64, amd64.
Approved by: portmgr (tier-2 blanket)
|
|
Thu, 9 Aug 2018
|
[ 06:58 jbeich ]
476723 archivers/innoextract/Makefile
476723 archivers/tardy/Makefile
476723 astro/libkgeomap-kde4/Makefile
476723 astro/libkgeomap/Makefile
476723 astro/libosmium/Makefile
476723 audio/ardour/Makefile
476723 audio/ardour5/Makefile
476723 audio/clementine-player/Makefile
476723 audio/cpp-xmms2/Makefile
476723 audio/csound6/Makefile
(Only the first 10 of 404 ports in this commit are shown above. )
devel/boost-*: update to 1.68.0
- Switch to C++14 for libboost_system to support C++14 consumers
Changes: http://www.boost.org/users/history/version_1_68_0.html
PR: 229569
Exp-run by: antoine
Differential Revision: https://reviews.freebsd.org/D16165
|
|
Mon, 23 Apr 2018
|
[ 16:08 jwb ]
468100 biology/Makefile
468100 biology/pbbam
468100 biology/pbbam/Makefile
468100 biology/pbbam/distinfo
468100 biology/pbbam/pkg-descr
468100 biology/pbbam/pkg-plist
biology/pbbam: PacBio BAM C++ library, with SWIG bindings
Approved by: jrm (mentor)
Differential Revision: https://reviews.freebsd.org/D15154
|
Number of commits found XX: 12 |
|
| Latest Vulnerabilities |
|
16 vulnerabilities affecting 98 ports have been reported in the past 14 days
|
|
* - modified, not new All vulnerabilities
Last updated:
2020-08-06 18:24:49
|
|
As an Amazon Associate I earn from qualifying purchases.