Port details on branch 2022Q3 |
- plinkseq Toolset for working with human genetic variation data
- 0.10_1 biology
=0 0.10_1Version of this port present on the latest quarterly branch.
- BROKEN: unfetchable
DEPRECATED: Broken for more than 6 months This port expired on: 2020-05-05 IGNORE: is marked as broken: unfetchable
- Maintainer: jwb@FreeBSD.org
- Port Added: 2012-09-27 10:00:09
- Last Update: 2020-05-05 15:38:12
- SVN Revision: 534093
- Also Listed In: science
- License: GPLv2
- WWW:
- http://atgu.mgh.harvard.edu/plinkseq/
- Description:
- PLINK/SEQ is an open-source C/C++ library for working with human
genetic variation data. The specific focus is to provide a platform
for analytic tool development for variation data from large-scale
resequencing and genotyping projects, particularly whole-exome and
whole-genome studies. It is independent of (but designed to be
complementary to) the existing PLINK package.
WWW: http://atgu.mgh.harvard.edu/plinkseq/
-
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- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- plinkseq>0:biology/plinkseq
- No installation instructions:
- This port has been deleted.
- PKGNAME: plinkseq
- Flavors: there is no flavor information for this port.
- distinfo:
- SHA256 (plinkseq-src-0.10.tgz) = e9d4705acf8b22eddba0c48cf502e3bd4236f3b60b010f39f94deecf37e94b58
SIZE (plinkseq-src-0.10.tgz) = 6090698
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- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- gmake : devel/gmake
- There are no ports dependent upon this port
Configuration Options:
- No options to configure
- Options name:
- N/A
- USES:
- libtool gmake
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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