Port details on branch 2022Q3 |
- rampler Standalone module for sampling genomic sequences
- 2.0.0_1 biology =0 2.0.0_1Version of this port present on the latest quarterly branch.
- Maintainer: yuri@FreeBSD.org
- Port Added: 2021-01-19 09:50:02
- Last Update: 2023-04-23 09:09:58
- Commit Hash: 8d3e020
- License: MIT
- WWW:
- https://github.com/rvaser/rampler
- Description:
- Rampler is a standalone module for sampling genomic sequences. It supports two
modes, random subsampling of sequencing data to a desired depth (given the
reference length) and file splitting to desired size in bytes.
- ¦ ¦ ¦ ¦
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- rampler>0:biology/rampler
- To install the port:
- cd /usr/ports/biology/rampler/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/rampler
- pkg install rampler
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: rampler
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1611049494
SHA256 (rvaser-rampler-2.0.0_GH0.tar.gz) = 3a589b1ce1c2a0ac55a105cdd185b5698b4a5f6c9e015e59edee56fd64261eb8
SIZE (rvaser-rampler-2.0.0_GH0.tar.gz) = 5190
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- bioparser>0 : biology/bioparser
- nucleic_acid.hpp : biology/biosoup
- cmake : devel/cmake-core
- ninja : devel/ninja
- There are no ports dependent upon this port
Configuration Options:
- No options to configure
- Options name:
- biology_rampler
- USES:
- cmake compiler:c++11-lang localbase
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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