| non port: biology/samtools/pkg-plist |
Number of commits found: 11 |
|
Saturday, 2 Mar 2024
|
19:40 Nuno Teixeira (eduardo) 
biology/samtools: Move man pages to share/man
Approved by: portmgr (blanket)
    01064ce |
|
Friday, 24 Feb 2023
|
23:27 Jason W. Bacon (jwb)
biology/samtools: Update to 1.17
Numerous enhancements and bug fixes
Changes: https://github.com/samtools/samtools/releases
Reported by: portscout
1993bfc |
|
Thursday, 5 Jan 2023
|
23:17 Jason W. Bacon (jwb)
biology/samtools: Update to 1.16.1
New "reference" subcommand to extract CRAM features (1.16)
Numerous minor enhancements and bug fixes
Changes: https://github.com/samtools/samtools/releases
193567c |
|
Saturday, 26 Feb 2022
|
15:04 Jason W. Bacon (jwb)
biology/samtools: Update to 1.15
Several small enhancements and a few bug fixes
Changes: https://github.com/samtools/samtools/releases
Reported by: portscout
822ec74 |
|
Saturday, 18 Dec 2021
|
17:56 Jason W. Bacon (jwb)
biology/samtools: Update to 1.14
Several enhancements and minor bug fixes
Changes: https://github.com/samtools/samtools/tags
d0228a8 |
|
Monday, 12 Jul 2021
|
13:24 Jason W. Bacon (jwb)
biology/samtools: Update to 1.13
Numerous enhancements and bug fixes
Changes: https://github.com/samtools/samtools/releases/tag/1.13
1c1b494 |
|
Saturday, 20 Mar 2021
|
17:14 jwb
biology/htslib: Update to 1.12
biology/samtools: Update to 1.12
biology/bcftools: Update to 1.12
Numerous enhancements, performance improvements, and bug fixes since 1.11
Build-tested all other htslib dependents, no revbumps should be needed
Reported by: portscout
  |
|
Thursday, 5 Nov 2020
|
20:32 jwb
biology/samtools: Upgrade to 1.11
Numerous new features, bug fixes and performance enhancements
https://github.com/samtools/samtools/releases/tag/1.11
Reported by: portscout
|
|
Monday, 3 Aug 2020
|
18:22 jwb
biology/samtools: Upgrade to 1.10
Numerous bug fixes and enhancements:
https://github.com/samtools/samtools/releases/tag/1.10
Take maintainership per ports/248089
PR: ports/248089
|
|
Friday, 25 Dec 2015
|
01:31 junovitch
biology/{bcftools,htslib,samtools}: update 1.2.x -> 1.3
- Update ports to 1.3 and set BUILD_DEPENDS of dependent ports to require
version 1.3 of htslib.
- Add CURL option to htslib
- Add TEST_TARGET with perl and bash dependencies for testing
- Tidy up spacing and pkg-message's
PR: 205524
PR: 205525
PR: 205526
Submitted by: cartwright@asu.edu (maintainer)
|
|
Monday, 15 Dec 2014
|
21:59 pawel
Samtools implements various utilities for post-processing alignments in the
SAM, BAM, and CRAM formats, including indexing, variant calling (in conjunction
with bcftools), and a simple alignment viewer.
WWW: http://www.htslib.org/
PR: 195592
Submitted by: Reed A. Cartwright <cartwright@asu.edu>
|
Number of commits found: 11 |
As an Amazon Associate I earn from qualifying purchases.