Port details on branch 2022Q3 |
- seaview Multiple DNA/protein sequence alignment editor
- 5.0.5_2,1 biology =0 5.0.5_1,1Version of this port present on the latest quarterly branch.
- Maintainer: bofh@FreeBSD.org
- Port Added: unknown
- Last Update: 2024-01-12 15:11:29
- Commit Hash: d432922
- License: GPLv3
- WWW:
- https://doua.prabi.fr/software/seaview
- Description:
- SeaView is a multiple sequence alignment editor.
You can align DNA/protein sequences from several organisms, and find
out their relative postions in phylogenic tree.
Once SeaView is installed, you can open the on-line help window through
the 'Help' button to learn how to use SeaView.
Example mase files can be found at:
ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/
- ¦ ¦ ¦ ¦
- Manual pages:
- FreshPorts has no man page information for this port.
- pkg-plist: as obtained via:
make generate-plist - Dependency lines:
-
- seaview>0:biology/seaview
- To install the port:
- cd /usr/ports/biology/seaview/ && make install clean
- To add the package, run one of these commands:
- pkg install biology/seaview
- pkg install seaview
NOTE: If this package has multiple flavors (see below), then use one of them instead of the name specified above.- PKGNAME: seaview
- Flavors: there is no flavor information for this port.
- distinfo:
- TIMESTAMP = 1638663734
SHA256 (seaview_5.0.5.tar.gz) = ce8f5e98ba47883bfa91e91bc79e4d3a26f158dd9983b5e78331a452a4b1f8f2
SIZE (seaview_5.0.5.tar.gz) = 471739
Packages (timestamps in pop-ups are UTC):
- Dependencies
- NOTE: FreshPorts displays only information on required and default dependencies. Optional dependencies are not covered.
- Build dependencies:
-
- gmake>=4.3 : devel/gmake
- x11.pc : x11/libX11
- xcursor.pc : x11/libXcursor
- xext.pc : x11/libXext
- xfixes.pc : x11/libXfixes
- xft.pc : x11-fonts/libXft
- xinerama.pc : x11/libXinerama
- xrender.pc : x11/libXrender
- Runtime dependencies:
-
- x11.pc : x11/libX11
- xcursor.pc : x11/libXcursor
- xext.pc : x11/libXext
- xfixes.pc : x11/libXfixes
- xft.pc : x11-fonts/libXft
- xinerama.pc : x11/libXinerama
- xrender.pc : x11/libXrender
- Library dependencies:
-
- libfltk.so : x11-toolkits/fltk
- libfontconfig.so : x11-fonts/fontconfig
- libpng.so : graphics/png
- libjpeg.so : graphics/jpeg-turbo
- There are no ports dependent upon this port
Configuration Options:
- No options to configure
- Options name:
- biology_seaview
- USES:
- gmake jpeg xorg
- FreshPorts was unable to extract/find any pkg message
- Master Sites:
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